Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2518:A2520
Extra
PDB:
ATOM 1 O3' A A2517 47.386 136.658 130.070 1.00 40.32 O
ATOM 2 P G A2518 48.076 135.746 131.185 1.00 39.36 P
ATOM 3 OP1 G A2518 49.145 134.937 130.579 1.00 39.28 O
ATOM 4 OP2 G A2518 46.988 135.083 131.916 1.00 39.82 O
ATOM 5 O5' G A2518 48.782 136.801 132.126 1.00 39.59 O
ATOM 6 C5' G A2518 49.882 137.570 131.636 1.00 40.16 C
ATOM 7 C4' G A2518 50.320 138.530 132.689 1.00 40.14 C
ATOM 8 O4' G A2518 49.208 139.394 133.031 1.00 40.16 O
ATOM 9 C3' G A2518 50.672 137.913 134.030 1.00 39.86 C
ATOM 10 O3' G A2518 51.975 137.354 134.038 1.00 40.18 O
ATOM 11 C2' G A2518 50.618 139.144 134.906 1.00 38.88 C
ATOM 12 O2' G A2518 51.718 139.990 134.632 1.00 38.20 O
ATOM 13 C1' G A2518 49.345 139.801 134.380 1.00 38.99 C
ATOM 14 N9 G A2518 48.184 139.341 135.133 1.00 38.89 N
ATOM 15 C8 G A2518 47.409 138.229 134.906 1.00 38.72 C
ATOM 16 N7 G A2518 46.439 138.101 135.767 1.00 38.77 N
ATOM 17 C5 G A2518 46.593 139.189 136.616 1.00 37.27 C
ATOM 18 C6 G A2518 45.844 139.589 137.743 1.00 35.74 C
ATOM 19 O6 G A2518 44.847 139.058 138.230 1.00 34.96 O
ATOM 20 N1 G A2518 46.359 140.747 138.313 1.00 36.88 N
ATOM 21 C2 G A2518 47.452 141.441 137.854 1.00 38.74 C
ATOM 22 N2 G A2518 47.817 142.535 138.560 1.00 36.68 N
ATOM 23 N3 G A2518 48.143 141.088 136.791 1.00 38.92 N
ATOM 24 C4 G A2518 47.665 139.958 136.231 1.00 38.14 C
ATOM 25 P A A2519 52.151 135.767 134.102 1.00 39.32 P
ATOM 26 OP1 A A2519 52.575 135.371 132.749 1.00 41.01 O
ATOM 27 OP2 A A2519 50.972 135.121 134.712 1.00 37.45 O
ATOM 28 O5' A A2519 53.378 135.568 135.089 1.00 41.33 O
TER
ATOM 1 O3' A B2519 52.548 138.038 138.414 1.00 41.69 O
ATOM 2 P A B2520 51.048 138.019 138.927 1.00 43.76 P
ATOM 3 OP1 A B2520 50.878 136.791 139.721 1.00 45.50 O
ATOM 4 OP2 A B2520 50.190 138.248 137.753 1.00 46.63 O
ATOM 5 O5' A B2520 50.943 139.256 139.910 1.00 45.39 O
ATOM 6 C5' A B2520 50.952 140.612 139.426 1.00 45.46 C
ATOM 7 C4' A B2520 52.163 141.329 139.964 1.00 44.86 C
ATOM 8 O4' A B2520 53.240 141.170 139.011 1.00 44.48 O
ATOM 9 C3' A B2520 52.013 142.822 140.213 1.00 44.34 C
ATOM 10 O3' A B2520 52.769 143.198 141.367 1.00 43.55 O
ATOM 11 C2' A B2520 52.633 143.436 138.961 1.00 45.40 C
ATOM 12 O2' A B2520 53.192 144.707 139.238 1.00 45.84 O
ATOM 13 C1' A B2520 53.734 142.429 138.626 1.00 45.01 C
ATOM 14 N9 A B2520 54.086 142.349 137.204 1.00 45.29 N
ATOM 15 C8 A B2520 53.286 142.541 136.109 1.00 47.85 C
ATOM 16 N7 A B2520 53.905 142.372 134.969 1.00 48.73 N
ATOM 17 C5 A B2520 55.198 142.048 135.335 1.00 47.20 C
ATOM 18 C6 A B2520 56.349 141.748 134.575 1.00 49.17 C
ATOM 19 N6 A B2520 56.378 141.737 133.238 1.00 48.36 N
ATOM 20 N1 A B2520 57.483 141.465 135.246 1.00 49.48 N
ATOM 21 C2 A B2520 57.449 141.502 136.586 1.00 48.61 C
ATOM 22 N3 A B2520 56.429 141.777 137.402 1.00 47.41 N
ATOM 23 C4 A B2520 55.324 142.041 136.704 1.00 46.02 C
ATOM 24 P C B2521 52.291 142.741 142.836 1.00 42.76 P
ATOM 25 OP1 C B2521 51.086 141.886 142.666 1.00 41.50 O
ATOM 26 OP2 C B2521 52.214 143.925 143.709 1.00 42.49 O
ATOM 27 O5' C B2521 53.517 141.860 143.348 1.00 41.05 O
TER
ATOM 2 P G A2518 48.076 135.746 131.185 1.00 39.36 P
ATOM 3 OP1 G A2518 49.145 134.937 130.579 1.00 39.28 O
ATOM 4 OP2 G A2518 46.988 135.083 131.916 1.00 39.82 O
ATOM 5 O5' G A2518 48.782 136.801 132.126 1.00 39.59 O
ATOM 6 C5' G A2518 49.882 137.570 131.636 1.00 40.16 C
ATOM 7 C4' G A2518 50.320 138.530 132.689 1.00 40.14 C
ATOM 8 O4' G A2518 49.208 139.394 133.031 1.00 40.16 O
ATOM 9 C3' G A2518 50.672 137.913 134.030 1.00 39.86 C
ATOM 10 O3' G A2518 51.975 137.354 134.038 1.00 40.18 O
ATOM 11 C2' G A2518 50.618 139.144 134.906 1.00 38.88 C
ATOM 12 O2' G A2518 51.718 139.990 134.632 1.00 38.20 O
ATOM 13 C1' G A2518 49.345 139.801 134.380 1.00 38.99 C
ATOM 14 N9 G A2518 48.184 139.341 135.133 1.00 38.89 N
ATOM 15 C8 G A2518 47.409 138.229 134.906 1.00 38.72 C
ATOM 16 N7 G A2518 46.439 138.101 135.767 1.00 38.77 N
ATOM 17 C5 G A2518 46.593 139.189 136.616 1.00 37.27 C
ATOM 18 C6 G A2518 45.844 139.589 137.743 1.00 35.74 C
ATOM 19 O6 G A2518 44.847 139.058 138.230 1.00 34.96 O
ATOM 20 N1 G A2518 46.359 140.747 138.313 1.00 36.88 N
ATOM 21 C2 G A2518 47.452 141.441 137.854 1.00 38.74 C
ATOM 22 N2 G A2518 47.817 142.535 138.560 1.00 36.68 N
ATOM 23 N3 G A2518 48.143 141.088 136.791 1.00 38.92 N
ATOM 24 C4 G A2518 47.665 139.958 136.231 1.00 38.14 C
ATOM 25 P A A2519 52.151 135.767 134.102 1.00 39.32 P
ATOM 26 OP1 A A2519 52.575 135.371 132.749 1.00 41.01 O
ATOM 27 OP2 A A2519 50.972 135.121 134.712 1.00 37.45 O
ATOM 28 O5' A A2519 53.378 135.568 135.089 1.00 41.33 O
TER
ATOM 1 O3' A B2519 52.548 138.038 138.414 1.00 41.69 O
ATOM 2 P A B2520 51.048 138.019 138.927 1.00 43.76 P
ATOM 3 OP1 A B2520 50.878 136.791 139.721 1.00 45.50 O
ATOM 4 OP2 A B2520 50.190 138.248 137.753 1.00 46.63 O
ATOM 5 O5' A B2520 50.943 139.256 139.910 1.00 45.39 O
ATOM 6 C5' A B2520 50.952 140.612 139.426 1.00 45.46 C
ATOM 7 C4' A B2520 52.163 141.329 139.964 1.00 44.86 C
ATOM 8 O4' A B2520 53.240 141.170 139.011 1.00 44.48 O
ATOM 9 C3' A B2520 52.013 142.822 140.213 1.00 44.34 C
ATOM 10 O3' A B2520 52.769 143.198 141.367 1.00 43.55 O
ATOM 11 C2' A B2520 52.633 143.436 138.961 1.00 45.40 C
ATOM 12 O2' A B2520 53.192 144.707 139.238 1.00 45.84 O
ATOM 13 C1' A B2520 53.734 142.429 138.626 1.00 45.01 C
ATOM 14 N9 A B2520 54.086 142.349 137.204 1.00 45.29 N
ATOM 15 C8 A B2520 53.286 142.541 136.109 1.00 47.85 C
ATOM 16 N7 A B2520 53.905 142.372 134.969 1.00 48.73 N
ATOM 17 C5 A B2520 55.198 142.048 135.335 1.00 47.20 C
ATOM 18 C6 A B2520 56.349 141.748 134.575 1.00 49.17 C
ATOM 19 N6 A B2520 56.378 141.737 133.238 1.00 48.36 N
ATOM 20 N1 A B2520 57.483 141.465 135.246 1.00 49.48 N
ATOM 21 C2 A B2520 57.449 141.502 136.586 1.00 48.61 C
ATOM 22 N3 A B2520 56.429 141.777 137.402 1.00 47.41 N
ATOM 23 C4 A B2520 55.324 142.041 136.704 1.00 46.02 C
ATOM 24 P C B2521 52.291 142.741 142.836 1.00 42.76 P
ATOM 25 OP1 C B2521 51.086 141.886 142.666 1.00 41.50 O
ATOM 26 OP2 C B2521 52.214 143.925 143.709 1.00 42.49 O
ATOM 27 O5' C B2521 53.517 141.860 143.348 1.00 41.05 O
TER
Atoms:
OP1: (49.145,134.937,130.579)
OP2: (46.988,135.083,131.916)
C3': (50.672,137.913,134.030)
C1': (49.345,139.801,134.380)
C5': (49.882,137.570,131.636)
O6: (44.847,139.058,138.230)
O4': (49.208,139.394,133.031)
C8: (47.409,138.229,134.906)
C2: (47.452,141.441,137.854)
C6: (45.844,139.589,137.743)
C5: (46.593,139.189,136.616)
C4: (47.665,139.958,136.231)
P: (48.076,135.746,131.185)
C4': (50.320,138.530,132.689)
C2': (50.618,139.144,134.906)
O2': (51.718,139.990,134.632)
N1: (46.359,140.747,138.313)
N2: (47.817,142.535,138.560)
N3: (48.143,141.088,136.791)
N7: (46.439,138.101,135.767)
N9: (48.184,139.341,135.133)
O5': (48.782,136.801,132.126)
O3': (51.975,137.354,134.038)
OP2: (46.988,135.083,131.916)
C3': (50.672,137.913,134.030)
C1': (49.345,139.801,134.380)
C5': (49.882,137.570,131.636)
O6: (44.847,139.058,138.230)
O4': (49.208,139.394,133.031)
C8: (47.409,138.229,134.906)
C2: (47.452,141.441,137.854)
C6: (45.844,139.589,137.743)
C5: (46.593,139.189,136.616)
C4: (47.665,139.958,136.231)
P: (48.076,135.746,131.185)
C4': (50.320,138.530,132.689)
C2': (50.618,139.144,134.906)
O2': (51.718,139.990,134.632)
N1: (46.359,140.747,138.313)
N2: (47.817,142.535,138.560)
N3: (48.143,141.088,136.791)
N7: (46.439,138.101,135.767)
N9: (48.184,139.341,135.133)
O5': (48.782,136.801,132.126)
O3': (51.975,137.354,134.038)
OP1: (50.878,136.791,139.721)
OP2: (50.190,138.248,137.753)
C3': (52.013,142.822,140.213)
C1': (53.734,142.429,138.626)
C5': (50.952,140.612,139.426)
O4': (53.240,141.170,139.011)
C8: (53.286,142.541,136.109)
O2': (53.192,144.707,139.238)
C6: (56.349,141.748,134.575)
C5: (55.198,142.048,135.335)
C4: (55.324,142.041,136.704)
P: (51.048,138.019,138.927)
C4': (52.163,141.329,139.964)
C2': (52.633,143.436,138.961)
C2: (57.449,141.502,136.586)
N1: (57.483,141.465,135.246)
N3: (56.429,141.777,137.402)
N6: (56.378,141.737,133.238)
N7: (53.905,142.372,134.969)
N9: (54.086,142.349,137.204)
O5': (50.943,139.256,139.910)
O3': (52.769,143.198,141.367)
OP2: (50.190,138.248,137.753)
C3': (52.013,142.822,140.213)
C1': (53.734,142.429,138.626)
C5': (50.952,140.612,139.426)
O4': (53.240,141.170,139.011)
C8: (53.286,142.541,136.109)
O2': (53.192,144.707,139.238)
C6: (56.349,141.748,134.575)
C5: (55.198,142.048,135.335)
C4: (55.324,142.041,136.704)
P: (51.048,138.019,138.927)
C4': (52.163,141.329,139.964)
C2': (52.633,143.436,138.961)
C2: (57.449,141.502,136.586)
N1: (57.483,141.465,135.246)
N3: (56.429,141.777,137.402)
N6: (56.378,141.737,133.238)
N7: (53.905,142.372,134.969)
N9: (54.086,142.349,137.204)
O5': (50.943,139.256,139.910)
O3': (52.769,143.198,141.367)
Image (generated by PyMOL):