Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01289:01286
Extra
PDB:
ATOM 1 O3' G A1288 21.342 114.567 77.236 1.00 38.97 O
ATOM 2 P A A1289 21.309 115.925 76.387 1.00 39.55 P
ATOM 3 OP1 A A1289 22.063 116.941 77.168 1.00 38.69 O
ATOM 4 OP2 A A1289 19.898 116.195 76.021 1.00 39.12 O
ATOM 5 O5' A A1289 22.129 115.562 75.069 1.00 37.71 O
ATOM 6 C5' A A1289 23.557 115.704 75.031 1.00 36.67 C
ATOM 7 C4' A A1289 24.120 114.989 73.839 1.00 35.97 C
ATOM 8 O4' A A1289 23.531 113.675 73.809 1.00 36.03 O
ATOM 9 C3' A A1289 23.791 115.571 72.475 1.00 35.72 C
ATOM 10 O3' A A1289 24.753 116.537 72.080 1.00 36.46 O
ATOM 11 C2' A A1289 23.945 114.358 71.572 1.00 38.07 C
ATOM 12 O2' A A1289 25.295 114.073 71.262 1.00 39.64 O
ATOM 13 C1' A A1289 23.414 113.241 72.468 1.00 37.65 C
ATOM 14 N9 A A1289 22.024 112.878 72.204 1.00 37.91 N
ATOM 15 C8 A A1289 20.885 113.576 72.508 1.00 37.94 C
ATOM 16 N7 A A1289 19.784 112.975 72.132 1.00 39.84 N
ATOM 17 C5 A A1289 20.230 111.797 71.542 1.00 40.32 C
ATOM 18 C6 A A1289 19.550 110.712 70.940 1.00 41.86 C
ATOM 19 N6 A A1289 18.221 110.651 70.801 1.00 42.84 N
ATOM 20 N1 A A1289 20.295 109.684 70.470 1.00 41.83 N
ATOM 21 C2 A A1289 21.625 109.758 70.581 1.00 41.80 C
ATOM 22 N3 A A1289 22.375 110.727 71.108 1.00 42.38 N
ATOM 23 C4 A A1289 21.606 111.726 71.581 1.00 39.43 C
ATOM 24 P G A1290 24.422 118.103 72.194 1.00 42.61 P
ATOM 25 OP1 G A1290 25.350 118.826 71.294 1.00 42.93 O
ATOM 26 OP2 G A1290 24.378 118.446 73.619 1.00 43.51 O
ATOM 27 O5' G A1290 22.936 118.281 71.643 1.00 46.85 O
TER
ATOM 1 O3' C B1285 7.935 113.607 75.699 1.00 43.41 O
ATOM 2 P G B1286 8.595 112.606 76.766 1.00 46.15 P
ATOM 3 OP1 G B1286 7.860 111.311 76.696 1.00 44.38 O
ATOM 4 OP2 G B1286 8.715 113.320 78.053 1.00 44.33 O
ATOM 5 O5' G B1286 10.067 112.355 76.219 1.00 46.41 O
ATOM 6 C5' G B1286 10.279 111.484 75.099 1.00 46.95 C
ATOM 7 C4' G B1286 11.743 111.431 74.723 1.00 46.51 C
ATOM 8 O4' G B1286 12.205 112.734 74.275 1.00 46.88 O
ATOM 9 C3' G B1286 12.745 111.097 75.810 1.00 43.56 C
ATOM 10 O3' G B1286 12.730 109.725 76.159 1.00 42.09 O
ATOM 11 C2' G B1286 14.043 111.508 75.136 1.00 42.46 C
ATOM 12 O2' G B1286 14.432 110.574 74.152 1.00 40.88 O
ATOM 13 C1' G B1286 13.612 112.806 74.447 1.00 44.45 C
ATOM 14 N9 G B1286 13.923 113.964 75.273 1.00 43.72 N
ATOM 15 C8 G B1286 13.101 114.603 76.164 1.00 43.94 C
ATOM 16 N7 G B1286 13.697 115.568 76.808 1.00 44.14 N
ATOM 17 C5 G B1286 14.986 115.572 76.299 1.00 44.62 C
ATOM 18 C6 G B1286 16.094 116.384 76.619 1.00 44.79 C
ATOM 19 O6 G B1286 16.166 117.299 77.449 1.00 45.35 O
ATOM 20 N1 G B1286 17.206 116.051 75.857 1.00 45.03 N
ATOM 21 C2 G B1286 17.243 115.068 74.906 1.00 46.15 C
ATOM 22 N2 G B1286 18.403 114.914 74.259 1.00 49.04 N
ATOM 23 N3 G B1286 16.220 114.298 74.605 1.00 45.66 N
ATOM 24 C4 G B1286 15.132 114.601 75.335 1.00 44.82 C
ATOM 25 P A B1287 12.545 109.314 77.701 1.00 41.19 P
ATOM 26 OP1 A B1287 12.447 107.836 77.768 1.00 40.33 O
ATOM 27 OP2 A B1287 11.457 110.154 78.259 1.00 41.45 O
ATOM 28 O5' A B1287 13.895 109.797 78.395 1.00 42.38 O
TER
ATOM 2 P A A1289 21.309 115.925 76.387 1.00 39.55 P
ATOM 3 OP1 A A1289 22.063 116.941 77.168 1.00 38.69 O
ATOM 4 OP2 A A1289 19.898 116.195 76.021 1.00 39.12 O
ATOM 5 O5' A A1289 22.129 115.562 75.069 1.00 37.71 O
ATOM 6 C5' A A1289 23.557 115.704 75.031 1.00 36.67 C
ATOM 7 C4' A A1289 24.120 114.989 73.839 1.00 35.97 C
ATOM 8 O4' A A1289 23.531 113.675 73.809 1.00 36.03 O
ATOM 9 C3' A A1289 23.791 115.571 72.475 1.00 35.72 C
ATOM 10 O3' A A1289 24.753 116.537 72.080 1.00 36.46 O
ATOM 11 C2' A A1289 23.945 114.358 71.572 1.00 38.07 C
ATOM 12 O2' A A1289 25.295 114.073 71.262 1.00 39.64 O
ATOM 13 C1' A A1289 23.414 113.241 72.468 1.00 37.65 C
ATOM 14 N9 A A1289 22.024 112.878 72.204 1.00 37.91 N
ATOM 15 C8 A A1289 20.885 113.576 72.508 1.00 37.94 C
ATOM 16 N7 A A1289 19.784 112.975 72.132 1.00 39.84 N
ATOM 17 C5 A A1289 20.230 111.797 71.542 1.00 40.32 C
ATOM 18 C6 A A1289 19.550 110.712 70.940 1.00 41.86 C
ATOM 19 N6 A A1289 18.221 110.651 70.801 1.00 42.84 N
ATOM 20 N1 A A1289 20.295 109.684 70.470 1.00 41.83 N
ATOM 21 C2 A A1289 21.625 109.758 70.581 1.00 41.80 C
ATOM 22 N3 A A1289 22.375 110.727 71.108 1.00 42.38 N
ATOM 23 C4 A A1289 21.606 111.726 71.581 1.00 39.43 C
ATOM 24 P G A1290 24.422 118.103 72.194 1.00 42.61 P
ATOM 25 OP1 G A1290 25.350 118.826 71.294 1.00 42.93 O
ATOM 26 OP2 G A1290 24.378 118.446 73.619 1.00 43.51 O
ATOM 27 O5' G A1290 22.936 118.281 71.643 1.00 46.85 O
TER
ATOM 1 O3' C B1285 7.935 113.607 75.699 1.00 43.41 O
ATOM 2 P G B1286 8.595 112.606 76.766 1.00 46.15 P
ATOM 3 OP1 G B1286 7.860 111.311 76.696 1.00 44.38 O
ATOM 4 OP2 G B1286 8.715 113.320 78.053 1.00 44.33 O
ATOM 5 O5' G B1286 10.067 112.355 76.219 1.00 46.41 O
ATOM 6 C5' G B1286 10.279 111.484 75.099 1.00 46.95 C
ATOM 7 C4' G B1286 11.743 111.431 74.723 1.00 46.51 C
ATOM 8 O4' G B1286 12.205 112.734 74.275 1.00 46.88 O
ATOM 9 C3' G B1286 12.745 111.097 75.810 1.00 43.56 C
ATOM 10 O3' G B1286 12.730 109.725 76.159 1.00 42.09 O
ATOM 11 C2' G B1286 14.043 111.508 75.136 1.00 42.46 C
ATOM 12 O2' G B1286 14.432 110.574 74.152 1.00 40.88 O
ATOM 13 C1' G B1286 13.612 112.806 74.447 1.00 44.45 C
ATOM 14 N9 G B1286 13.923 113.964 75.273 1.00 43.72 N
ATOM 15 C8 G B1286 13.101 114.603 76.164 1.00 43.94 C
ATOM 16 N7 G B1286 13.697 115.568 76.808 1.00 44.14 N
ATOM 17 C5 G B1286 14.986 115.572 76.299 1.00 44.62 C
ATOM 18 C6 G B1286 16.094 116.384 76.619 1.00 44.79 C
ATOM 19 O6 G B1286 16.166 117.299 77.449 1.00 45.35 O
ATOM 20 N1 G B1286 17.206 116.051 75.857 1.00 45.03 N
ATOM 21 C2 G B1286 17.243 115.068 74.906 1.00 46.15 C
ATOM 22 N2 G B1286 18.403 114.914 74.259 1.00 49.04 N
ATOM 23 N3 G B1286 16.220 114.298 74.605 1.00 45.66 N
ATOM 24 C4 G B1286 15.132 114.601 75.335 1.00 44.82 C
ATOM 25 P A B1287 12.545 109.314 77.701 1.00 41.19 P
ATOM 26 OP1 A B1287 12.447 107.836 77.768 1.00 40.33 O
ATOM 27 OP2 A B1287 11.457 110.154 78.259 1.00 41.45 O
ATOM 28 O5' A B1287 13.895 109.797 78.395 1.00 42.38 O
TER
Atoms:
OP1: (22.063,116.941,77.168)
OP2: (19.898,116.195,76.021)
C3': (23.791,115.571,72.475)
C1': (23.414,113.241,72.468)
C5': (23.557,115.704,75.031)
O4': (23.531,113.675,73.809)
C8: (20.885,113.576,72.508)
O2': (25.295,114.073,71.262)
C6: (19.550,110.712,70.940)
C5: (20.230,111.797,71.542)
C4: (21.606,111.726,71.581)
P: (21.309,115.925,76.387)
C4': (24.120,114.989,73.839)
C2': (23.945,114.358,71.572)
C2: (21.625,109.758,70.581)
N1: (20.295,109.684,70.470)
N3: (22.375,110.727,71.108)
N6: (18.221,110.651,70.801)
N7: (19.784,112.975,72.132)
N9: (22.024,112.878,72.204)
O5': (22.129,115.562,75.069)
O3': (24.753,116.537,72.080)
OP2: (19.898,116.195,76.021)
C3': (23.791,115.571,72.475)
C1': (23.414,113.241,72.468)
C5': (23.557,115.704,75.031)
O4': (23.531,113.675,73.809)
C8: (20.885,113.576,72.508)
O2': (25.295,114.073,71.262)
C6: (19.550,110.712,70.940)
C5: (20.230,111.797,71.542)
C4: (21.606,111.726,71.581)
P: (21.309,115.925,76.387)
C4': (24.120,114.989,73.839)
C2': (23.945,114.358,71.572)
C2: (21.625,109.758,70.581)
N1: (20.295,109.684,70.470)
N3: (22.375,110.727,71.108)
N6: (18.221,110.651,70.801)
N7: (19.784,112.975,72.132)
N9: (22.024,112.878,72.204)
O5': (22.129,115.562,75.069)
O3': (24.753,116.537,72.080)
OP1: (7.860,111.311,76.696)
OP2: (8.715,113.320,78.053)
C3': (12.745,111.097,75.810)
C1': (13.612,112.806,74.447)
C5': (10.279,111.484,75.099)
O6: (16.166,117.299,77.449)
O4': (12.205,112.734,74.275)
C8: (13.101,114.603,76.164)
C2: (17.243,115.068,74.906)
C6: (16.094,116.384,76.619)
C5: (14.986,115.572,76.299)
C4: (15.132,114.601,75.335)
P: (8.595,112.606,76.766)
C4': (11.743,111.431,74.723)
C2': (14.043,111.508,75.136)
O2': (14.432,110.574,74.152)
N1: (17.206,116.051,75.857)
N2: (18.403,114.914,74.259)
N3: (16.220,114.298,74.605)
N7: (13.697,115.568,76.808)
N9: (13.923,113.964,75.273)
O5': (10.067,112.355,76.219)
O3': (12.730,109.725,76.159)
OP2: (8.715,113.320,78.053)
C3': (12.745,111.097,75.810)
C1': (13.612,112.806,74.447)
C5': (10.279,111.484,75.099)
O6: (16.166,117.299,77.449)
O4': (12.205,112.734,74.275)
C8: (13.101,114.603,76.164)
C2: (17.243,115.068,74.906)
C6: (16.094,116.384,76.619)
C5: (14.986,115.572,76.299)
C4: (15.132,114.601,75.335)
P: (8.595,112.606,76.766)
C4': (11.743,111.431,74.723)
C2': (14.043,111.508,75.136)
O2': (14.432,110.574,74.152)
N1: (17.206,116.051,75.857)
N2: (18.403,114.914,74.259)
N3: (16.220,114.298,74.605)
N7: (13.697,115.568,76.808)
N9: (13.923,113.964,75.273)
O5': (10.067,112.355,76.219)
O3': (12.730,109.725,76.159)
Image (generated by PyMOL):