Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02518:02520
Extra
PDB:
ATOM 1 O3' A A2517 47.381 136.387 129.598 1.00 38.15 O
ATOM 2 P G A2518 48.039 135.444 130.714 1.00 37.69 P
ATOM 3 OP1 G A2518 49.068 134.611 130.046 1.00 39.63 O
ATOM 4 OP2 G A2518 46.944 134.789 131.468 1.00 38.17 O
ATOM 5 O5' G A2518 48.808 136.469 131.658 1.00 38.46 O
ATOM 6 C5' G A2518 49.969 137.177 131.170 1.00 38.86 C
ATOM 7 C4' G A2518 50.461 138.159 132.203 1.00 40.44 C
ATOM 8 O4' G A2518 49.412 139.128 132.470 1.00 41.36 O
ATOM 9 C3' G A2518 50.779 137.593 133.582 1.00 40.31 C
ATOM 10 O3' G A2518 52.060 136.982 133.657 1.00 38.70 O
ATOM 11 C2' G A2518 50.689 138.837 134.451 1.00 39.56 C
ATOM 12 O2' G A2518 51.827 139.667 134.349 1.00 39.99 O
ATOM 13 C1' G A2518 49.480 139.539 133.828 1.00 40.28 C
ATOM 14 N9 G A2518 48.249 139.143 134.508 1.00 39.12 N
ATOM 15 C8 G A2518 47.400 138.109 134.191 1.00 37.93 C
ATOM 16 N7 G A2518 46.428 137.965 135.049 1.00 38.59 N
ATOM 17 C5 G A2518 46.640 138.973 135.983 1.00 39.35 C
ATOM 18 C6 G A2518 45.923 139.309 137.173 1.00 38.66 C
ATOM 19 O6 G A2518 44.934 138.748 137.671 1.00 35.48 O
ATOM 20 N1 G A2518 46.480 140.417 137.803 1.00 39.84 N
ATOM 21 C2 G A2518 47.586 141.111 137.361 1.00 41.18 C
ATOM 22 N2 G A2518 47.972 142.167 138.094 1.00 41.36 N
ATOM 23 N3 G A2518 48.265 140.796 136.277 1.00 40.98 N
ATOM 24 C4 G A2518 47.743 139.725 135.643 1.00 39.85 C
ATOM 25 P A A2519 52.176 135.380 133.655 1.00 38.57 P
ATOM 26 OP1 A A2519 52.484 134.970 132.262 1.00 40.90 O
ATOM 27 OP2 A A2519 50.979 134.819 134.328 1.00 36.70 O
ATOM 28 O5' A A2519 53.478 135.100 134.533 1.00 39.95 O
TER
ATOM 1 O3' A B2519 52.726 137.561 137.884 1.00 39.47 O
ATOM 2 P A B2520 51.200 137.715 138.332 1.00 42.17 P
ATOM 3 OP1 A B2520 50.819 136.490 139.067 1.00 43.15 O
ATOM 4 OP2 A B2520 50.381 138.151 137.177 1.00 46.42 O
ATOM 5 O5' A B2520 51.246 138.928 139.342 1.00 41.26 O
ATOM 6 C5' A B2520 51.135 140.278 138.877 1.00 39.91 C
ATOM 7 C4' A B2520 52.292 141.065 139.408 1.00 40.31 C
ATOM 8 O4' A B2520 53.388 140.922 138.478 1.00 40.07 O
ATOM 9 C3' A B2520 52.096 142.556 139.644 1.00 38.65 C
ATOM 10 O3' A B2520 52.842 142.923 140.810 1.00 38.19 O
ATOM 11 C2' A B2520 52.707 143.170 138.385 1.00 39.26 C
ATOM 12 O2' A B2520 53.246 144.453 138.621 1.00 38.77 O
ATOM 13 C1' A B2520 53.843 142.192 138.078 1.00 40.60 C
ATOM 14 N9 A B2520 54.235 142.080 136.672 1.00 40.51 N
ATOM 15 C8 A B2520 53.468 142.256 135.550 1.00 41.69 C
ATOM 16 N7 A B2520 54.104 142.012 134.432 1.00 42.66 N
ATOM 17 C5 A B2520 55.380 141.664 134.844 1.00 42.32 C
ATOM 18 C6 A B2520 56.530 141.273 134.136 1.00 43.16 C
ATOM 19 N6 A B2520 56.578 141.158 132.808 1.00 43.00 N
ATOM 20 N1 A B2520 57.642 140.997 134.850 1.00 43.06 N
ATOM 21 C2 A B2520 57.591 141.106 136.180 1.00 42.83 C
ATOM 22 N3 A B2520 56.572 141.454 136.959 1.00 43.04 N
ATOM 23 C4 A B2520 55.481 141.722 136.220 1.00 41.73 C
ATOM 24 P C B2521 52.385 142.399 142.275 1.00 37.51 P
ATOM 25 OP1 C B2521 51.182 141.537 142.152 1.00 35.44 O
ATOM 26 OP2 C B2521 52.347 143.563 143.180 1.00 39.57 O
ATOM 27 O5' C B2521 53.614 141.508 142.766 1.00 36.30 O
TER
ATOM 2 P G A2518 48.039 135.444 130.714 1.00 37.69 P
ATOM 3 OP1 G A2518 49.068 134.611 130.046 1.00 39.63 O
ATOM 4 OP2 G A2518 46.944 134.789 131.468 1.00 38.17 O
ATOM 5 O5' G A2518 48.808 136.469 131.658 1.00 38.46 O
ATOM 6 C5' G A2518 49.969 137.177 131.170 1.00 38.86 C
ATOM 7 C4' G A2518 50.461 138.159 132.203 1.00 40.44 C
ATOM 8 O4' G A2518 49.412 139.128 132.470 1.00 41.36 O
ATOM 9 C3' G A2518 50.779 137.593 133.582 1.00 40.31 C
ATOM 10 O3' G A2518 52.060 136.982 133.657 1.00 38.70 O
ATOM 11 C2' G A2518 50.689 138.837 134.451 1.00 39.56 C
ATOM 12 O2' G A2518 51.827 139.667 134.349 1.00 39.99 O
ATOM 13 C1' G A2518 49.480 139.539 133.828 1.00 40.28 C
ATOM 14 N9 G A2518 48.249 139.143 134.508 1.00 39.12 N
ATOM 15 C8 G A2518 47.400 138.109 134.191 1.00 37.93 C
ATOM 16 N7 G A2518 46.428 137.965 135.049 1.00 38.59 N
ATOM 17 C5 G A2518 46.640 138.973 135.983 1.00 39.35 C
ATOM 18 C6 G A2518 45.923 139.309 137.173 1.00 38.66 C
ATOM 19 O6 G A2518 44.934 138.748 137.671 1.00 35.48 O
ATOM 20 N1 G A2518 46.480 140.417 137.803 1.00 39.84 N
ATOM 21 C2 G A2518 47.586 141.111 137.361 1.00 41.18 C
ATOM 22 N2 G A2518 47.972 142.167 138.094 1.00 41.36 N
ATOM 23 N3 G A2518 48.265 140.796 136.277 1.00 40.98 N
ATOM 24 C4 G A2518 47.743 139.725 135.643 1.00 39.85 C
ATOM 25 P A A2519 52.176 135.380 133.655 1.00 38.57 P
ATOM 26 OP1 A A2519 52.484 134.970 132.262 1.00 40.90 O
ATOM 27 OP2 A A2519 50.979 134.819 134.328 1.00 36.70 O
ATOM 28 O5' A A2519 53.478 135.100 134.533 1.00 39.95 O
TER
ATOM 1 O3' A B2519 52.726 137.561 137.884 1.00 39.47 O
ATOM 2 P A B2520 51.200 137.715 138.332 1.00 42.17 P
ATOM 3 OP1 A B2520 50.819 136.490 139.067 1.00 43.15 O
ATOM 4 OP2 A B2520 50.381 138.151 137.177 1.00 46.42 O
ATOM 5 O5' A B2520 51.246 138.928 139.342 1.00 41.26 O
ATOM 6 C5' A B2520 51.135 140.278 138.877 1.00 39.91 C
ATOM 7 C4' A B2520 52.292 141.065 139.408 1.00 40.31 C
ATOM 8 O4' A B2520 53.388 140.922 138.478 1.00 40.07 O
ATOM 9 C3' A B2520 52.096 142.556 139.644 1.00 38.65 C
ATOM 10 O3' A B2520 52.842 142.923 140.810 1.00 38.19 O
ATOM 11 C2' A B2520 52.707 143.170 138.385 1.00 39.26 C
ATOM 12 O2' A B2520 53.246 144.453 138.621 1.00 38.77 O
ATOM 13 C1' A B2520 53.843 142.192 138.078 1.00 40.60 C
ATOM 14 N9 A B2520 54.235 142.080 136.672 1.00 40.51 N
ATOM 15 C8 A B2520 53.468 142.256 135.550 1.00 41.69 C
ATOM 16 N7 A B2520 54.104 142.012 134.432 1.00 42.66 N
ATOM 17 C5 A B2520 55.380 141.664 134.844 1.00 42.32 C
ATOM 18 C6 A B2520 56.530 141.273 134.136 1.00 43.16 C
ATOM 19 N6 A B2520 56.578 141.158 132.808 1.00 43.00 N
ATOM 20 N1 A B2520 57.642 140.997 134.850 1.00 43.06 N
ATOM 21 C2 A B2520 57.591 141.106 136.180 1.00 42.83 C
ATOM 22 N3 A B2520 56.572 141.454 136.959 1.00 43.04 N
ATOM 23 C4 A B2520 55.481 141.722 136.220 1.00 41.73 C
ATOM 24 P C B2521 52.385 142.399 142.275 1.00 37.51 P
ATOM 25 OP1 C B2521 51.182 141.537 142.152 1.00 35.44 O
ATOM 26 OP2 C B2521 52.347 143.563 143.180 1.00 39.57 O
ATOM 27 O5' C B2521 53.614 141.508 142.766 1.00 36.30 O
TER
Atoms:
OP1: (49.068,134.611,130.046)
OP2: (46.944,134.789,131.468)
C3': (50.779,137.593,133.582)
C1': (49.480,139.539,133.828)
C5': (49.969,137.177,131.170)
O6: (44.934,138.748,137.671)
O4': (49.412,139.128,132.470)
C8: (47.400,138.109,134.191)
C2: (47.586,141.111,137.361)
C6: (45.923,139.309,137.173)
C5: (46.640,138.973,135.983)
C4: (47.743,139.725,135.643)
P: (48.039,135.444,130.714)
C4': (50.461,138.159,132.203)
C2': (50.689,138.837,134.451)
O2': (51.827,139.667,134.349)
N1: (46.480,140.417,137.803)
N2: (47.972,142.167,138.094)
N3: (48.265,140.796,136.277)
N7: (46.428,137.965,135.049)
N9: (48.249,139.143,134.508)
O5': (48.808,136.469,131.658)
O3': (52.060,136.982,133.657)
OP2: (46.944,134.789,131.468)
C3': (50.779,137.593,133.582)
C1': (49.480,139.539,133.828)
C5': (49.969,137.177,131.170)
O6: (44.934,138.748,137.671)
O4': (49.412,139.128,132.470)
C8: (47.400,138.109,134.191)
C2: (47.586,141.111,137.361)
C6: (45.923,139.309,137.173)
C5: (46.640,138.973,135.983)
C4: (47.743,139.725,135.643)
P: (48.039,135.444,130.714)
C4': (50.461,138.159,132.203)
C2': (50.689,138.837,134.451)
O2': (51.827,139.667,134.349)
N1: (46.480,140.417,137.803)
N2: (47.972,142.167,138.094)
N3: (48.265,140.796,136.277)
N7: (46.428,137.965,135.049)
N9: (48.249,139.143,134.508)
O5': (48.808,136.469,131.658)
O3': (52.060,136.982,133.657)
OP1: (50.819,136.490,139.067)
OP2: (50.381,138.151,137.177)
C3': (52.096,142.556,139.644)
C1': (53.843,142.192,138.078)
C5': (51.135,140.278,138.877)
O4': (53.388,140.922,138.478)
C8: (53.468,142.256,135.550)
O2': (53.246,144.453,138.621)
C6: (56.530,141.273,134.136)
C5: (55.380,141.664,134.844)
C4: (55.481,141.722,136.220)
P: (51.200,137.715,138.332)
C4': (52.292,141.065,139.408)
C2': (52.707,143.170,138.385)
C2: (57.591,141.106,136.180)
N1: (57.642,140.997,134.850)
N3: (56.572,141.454,136.959)
N6: (56.578,141.158,132.808)
N7: (54.104,142.012,134.432)
N9: (54.235,142.080,136.672)
O5': (51.246,138.928,139.342)
O3': (52.842,142.923,140.810)
OP2: (50.381,138.151,137.177)
C3': (52.096,142.556,139.644)
C1': (53.843,142.192,138.078)
C5': (51.135,140.278,138.877)
O4': (53.388,140.922,138.478)
C8: (53.468,142.256,135.550)
O2': (53.246,144.453,138.621)
C6: (56.530,141.273,134.136)
C5: (55.380,141.664,134.844)
C4: (55.481,141.722,136.220)
P: (51.200,137.715,138.332)
C4': (52.292,141.065,139.408)
C2': (52.707,143.170,138.385)
C2: (57.591,141.106,136.180)
N1: (57.642,140.997,134.850)
N3: (56.572,141.454,136.959)
N6: (56.578,141.158,132.808)
N7: (54.104,142.012,134.432)
N9: (54.235,142.080,136.672)
O5': (51.246,138.928,139.342)
O3': (52.842,142.923,140.810)
Image (generated by PyMOL):