Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02518:02520
Extra
PDB:
ATOM 1 O3' A A2517 47.416 136.780 129.983 1.00 46.03 O
ATOM 2 P G A2518 47.999 135.822 131.126 1.00 48.08 P
ATOM 3 OP1 G A2518 49.060 134.976 130.534 1.00 48.76 O
ATOM 4 OP2 G A2518 46.842 135.181 131.807 1.00 47.72 O
ATOM 5 O5' G A2518 48.710 136.838 132.120 1.00 47.14 O
ATOM 6 C5' G A2518 49.823 137.624 131.655 1.00 48.79 C
ATOM 7 C4' G A2518 50.281 138.596 132.715 1.00 49.08 C
ATOM 8 O4' G A2518 49.214 139.534 133.018 1.00 48.52 O
ATOM 9 C3' G A2518 50.646 138.024 134.074 1.00 47.70 C
ATOM 10 O3' G A2518 51.945 137.435 134.077 1.00 47.16 O
ATOM 11 C2' G A2518 50.567 139.276 134.937 1.00 46.44 C
ATOM 12 O2' G A2518 51.662 140.144 134.724 1.00 44.91 O
ATOM 13 C1' G A2518 49.310 139.939 134.370 1.00 46.56 C
ATOM 14 N9 G A2518 48.112 139.490 135.071 1.00 46.92 N
ATOM 15 C8 G A2518 47.339 138.390 134.787 1.00 47.20 C
ATOM 16 N7 G A2518 46.377 138.204 135.651 1.00 48.28 N
ATOM 17 C5 G A2518 46.515 139.254 136.552 1.00 47.11 C
ATOM 18 C6 G A2518 45.772 139.570 137.725 1.00 46.22 C
ATOM 19 O6 G A2518 44.835 138.944 138.242 1.00 43.64 O
ATOM 20 N1 G A2518 46.233 140.740 138.317 1.00 48.05 N
ATOM 21 C2 G A2518 47.290 141.499 137.858 1.00 49.90 C
ATOM 22 N2 G A2518 47.590 142.605 138.557 1.00 50.09 N
ATOM 23 N3 G A2518 48.002 141.198 136.790 1.00 49.05 N
ATOM 24 C4 G A2518 47.562 140.073 136.189 1.00 47.86 C
ATOM 25 P A A2519 52.099 135.835 134.110 1.00 46.70 P
ATOM 26 OP1 A A2519 52.454 135.401 132.744 1.00 47.28 O
ATOM 27 OP2 A A2519 50.913 135.236 134.781 1.00 43.75 O
ATOM 28 O5' A A2519 53.388 135.608 135.017 1.00 48.66 O
TER
ATOM 1 O3' A B2519 52.646 138.128 138.342 1.00 48.93 O
ATOM 2 P A B2520 51.142 138.161 138.874 1.00 50.57 P
ATOM 3 OP1 A B2520 50.875 136.883 139.547 1.00 52.01 O
ATOM 4 OP2 A B2520 50.259 138.599 137.777 1.00 55.73 O
ATOM 5 O5' A B2520 51.151 139.324 139.945 1.00 52.64 O
ATOM 6 C5' A B2520 50.991 140.699 139.542 1.00 52.30 C
ATOM 7 C4' A B2520 52.190 141.481 139.992 1.00 51.47 C
ATOM 8 O4' A B2520 53.240 141.319 139.007 1.00 51.38 O
ATOM 9 C3' A B2520 52.015 142.978 140.208 1.00 50.30 C
ATOM 10 O3' A B2520 52.802 143.358 141.339 1.00 50.19 O
ATOM 11 C2' A B2520 52.602 143.572 138.926 1.00 49.90 C
ATOM 12 O2' A B2520 53.131 144.872 139.114 1.00 47.76 O
ATOM 13 C1' A B2520 53.728 142.584 138.621 1.00 50.63 C
ATOM 14 N9 A B2520 54.146 142.487 137.224 1.00 49.36 N
ATOM 15 C8 A B2520 53.387 142.630 136.093 1.00 50.54 C
ATOM 16 N7 A B2520 54.051 142.429 134.982 1.00 51.20 N
ATOM 17 C5 A B2520 55.338 142.148 135.410 1.00 50.13 C
ATOM 18 C6 A B2520 56.519 141.832 134.711 1.00 50.33 C
ATOM 19 N6 A B2520 56.595 141.759 133.383 1.00 48.29 N
ATOM 20 N1 A B2520 57.633 141.594 135.437 1.00 50.92 N
ATOM 21 C2 A B2520 57.556 141.681 136.771 1.00 51.87 C
ATOM 22 N3 A B2520 56.503 141.975 137.542 1.00 50.98 N
ATOM 23 C4 A B2520 55.414 142.194 136.788 1.00 49.88 C
ATOM 24 P C B2521 52.392 142.862 142.824 1.00 50.06 P
ATOM 25 OP1 C B2521 51.130 142.063 142.756 1.00 48.17 O
ATOM 26 OP2 C B2521 52.455 144.041 143.718 1.00 50.46 O
ATOM 27 O5' C B2521 53.607 141.915 143.253 1.00 48.07 O
TER
ATOM 2 P G A2518 47.999 135.822 131.126 1.00 48.08 P
ATOM 3 OP1 G A2518 49.060 134.976 130.534 1.00 48.76 O
ATOM 4 OP2 G A2518 46.842 135.181 131.807 1.00 47.72 O
ATOM 5 O5' G A2518 48.710 136.838 132.120 1.00 47.14 O
ATOM 6 C5' G A2518 49.823 137.624 131.655 1.00 48.79 C
ATOM 7 C4' G A2518 50.281 138.596 132.715 1.00 49.08 C
ATOM 8 O4' G A2518 49.214 139.534 133.018 1.00 48.52 O
ATOM 9 C3' G A2518 50.646 138.024 134.074 1.00 47.70 C
ATOM 10 O3' G A2518 51.945 137.435 134.077 1.00 47.16 O
ATOM 11 C2' G A2518 50.567 139.276 134.937 1.00 46.44 C
ATOM 12 O2' G A2518 51.662 140.144 134.724 1.00 44.91 O
ATOM 13 C1' G A2518 49.310 139.939 134.370 1.00 46.56 C
ATOM 14 N9 G A2518 48.112 139.490 135.071 1.00 46.92 N
ATOM 15 C8 G A2518 47.339 138.390 134.787 1.00 47.20 C
ATOM 16 N7 G A2518 46.377 138.204 135.651 1.00 48.28 N
ATOM 17 C5 G A2518 46.515 139.254 136.552 1.00 47.11 C
ATOM 18 C6 G A2518 45.772 139.570 137.725 1.00 46.22 C
ATOM 19 O6 G A2518 44.835 138.944 138.242 1.00 43.64 O
ATOM 20 N1 G A2518 46.233 140.740 138.317 1.00 48.05 N
ATOM 21 C2 G A2518 47.290 141.499 137.858 1.00 49.90 C
ATOM 22 N2 G A2518 47.590 142.605 138.557 1.00 50.09 N
ATOM 23 N3 G A2518 48.002 141.198 136.790 1.00 49.05 N
ATOM 24 C4 G A2518 47.562 140.073 136.189 1.00 47.86 C
ATOM 25 P A A2519 52.099 135.835 134.110 1.00 46.70 P
ATOM 26 OP1 A A2519 52.454 135.401 132.744 1.00 47.28 O
ATOM 27 OP2 A A2519 50.913 135.236 134.781 1.00 43.75 O
ATOM 28 O5' A A2519 53.388 135.608 135.017 1.00 48.66 O
TER
ATOM 1 O3' A B2519 52.646 138.128 138.342 1.00 48.93 O
ATOM 2 P A B2520 51.142 138.161 138.874 1.00 50.57 P
ATOM 3 OP1 A B2520 50.875 136.883 139.547 1.00 52.01 O
ATOM 4 OP2 A B2520 50.259 138.599 137.777 1.00 55.73 O
ATOM 5 O5' A B2520 51.151 139.324 139.945 1.00 52.64 O
ATOM 6 C5' A B2520 50.991 140.699 139.542 1.00 52.30 C
ATOM 7 C4' A B2520 52.190 141.481 139.992 1.00 51.47 C
ATOM 8 O4' A B2520 53.240 141.319 139.007 1.00 51.38 O
ATOM 9 C3' A B2520 52.015 142.978 140.208 1.00 50.30 C
ATOM 10 O3' A B2520 52.802 143.358 141.339 1.00 50.19 O
ATOM 11 C2' A B2520 52.602 143.572 138.926 1.00 49.90 C
ATOM 12 O2' A B2520 53.131 144.872 139.114 1.00 47.76 O
ATOM 13 C1' A B2520 53.728 142.584 138.621 1.00 50.63 C
ATOM 14 N9 A B2520 54.146 142.487 137.224 1.00 49.36 N
ATOM 15 C8 A B2520 53.387 142.630 136.093 1.00 50.54 C
ATOM 16 N7 A B2520 54.051 142.429 134.982 1.00 51.20 N
ATOM 17 C5 A B2520 55.338 142.148 135.410 1.00 50.13 C
ATOM 18 C6 A B2520 56.519 141.832 134.711 1.00 50.33 C
ATOM 19 N6 A B2520 56.595 141.759 133.383 1.00 48.29 N
ATOM 20 N1 A B2520 57.633 141.594 135.437 1.00 50.92 N
ATOM 21 C2 A B2520 57.556 141.681 136.771 1.00 51.87 C
ATOM 22 N3 A B2520 56.503 141.975 137.542 1.00 50.98 N
ATOM 23 C4 A B2520 55.414 142.194 136.788 1.00 49.88 C
ATOM 24 P C B2521 52.392 142.862 142.824 1.00 50.06 P
ATOM 25 OP1 C B2521 51.130 142.063 142.756 1.00 48.17 O
ATOM 26 OP2 C B2521 52.455 144.041 143.718 1.00 50.46 O
ATOM 27 O5' C B2521 53.607 141.915 143.253 1.00 48.07 O
TER
Atoms:
OP1: (49.060,134.976,130.534)
OP2: (46.842,135.181,131.807)
C3': (50.646,138.024,134.074)
C1': (49.310,139.939,134.370)
C5': (49.823,137.624,131.655)
O6: (44.835,138.944,138.242)
O4': (49.214,139.534,133.018)
C8: (47.339,138.390,134.787)
C2: (47.290,141.499,137.858)
C6: (45.772,139.570,137.725)
C5: (46.515,139.254,136.552)
C4: (47.562,140.073,136.189)
P: (47.999,135.822,131.126)
C4': (50.281,138.596,132.715)
C2': (50.567,139.276,134.937)
O2': (51.662,140.144,134.724)
N1: (46.233,140.740,138.317)
N2: (47.590,142.605,138.557)
N3: (48.002,141.198,136.790)
N7: (46.377,138.204,135.651)
N9: (48.112,139.490,135.071)
O5': (48.710,136.838,132.120)
O3': (51.945,137.435,134.077)
OP2: (46.842,135.181,131.807)
C3': (50.646,138.024,134.074)
C1': (49.310,139.939,134.370)
C5': (49.823,137.624,131.655)
O6: (44.835,138.944,138.242)
O4': (49.214,139.534,133.018)
C8: (47.339,138.390,134.787)
C2: (47.290,141.499,137.858)
C6: (45.772,139.570,137.725)
C5: (46.515,139.254,136.552)
C4: (47.562,140.073,136.189)
P: (47.999,135.822,131.126)
C4': (50.281,138.596,132.715)
C2': (50.567,139.276,134.937)
O2': (51.662,140.144,134.724)
N1: (46.233,140.740,138.317)
N2: (47.590,142.605,138.557)
N3: (48.002,141.198,136.790)
N7: (46.377,138.204,135.651)
N9: (48.112,139.490,135.071)
O5': (48.710,136.838,132.120)
O3': (51.945,137.435,134.077)
OP1: (50.875,136.883,139.547)
OP2: (50.259,138.599,137.777)
C3': (52.015,142.978,140.208)
C1': (53.728,142.584,138.621)
C5': (50.991,140.699,139.542)
O4': (53.240,141.319,139.007)
C8: (53.387,142.630,136.093)
O2': (53.131,144.872,139.114)
C6: (56.519,141.832,134.711)
C5: (55.338,142.148,135.410)
C4: (55.414,142.194,136.788)
P: (51.142,138.161,138.874)
C4': (52.190,141.481,139.992)
C2': (52.602,143.572,138.926)
C2: (57.556,141.681,136.771)
N1: (57.633,141.594,135.437)
N3: (56.503,141.975,137.542)
N6: (56.595,141.759,133.383)
N7: (54.051,142.429,134.982)
N9: (54.146,142.487,137.224)
O5': (51.151,139.324,139.945)
O3': (52.802,143.358,141.339)
OP2: (50.259,138.599,137.777)
C3': (52.015,142.978,140.208)
C1': (53.728,142.584,138.621)
C5': (50.991,140.699,139.542)
O4': (53.240,141.319,139.007)
C8: (53.387,142.630,136.093)
O2': (53.131,144.872,139.114)
C6: (56.519,141.832,134.711)
C5: (55.338,142.148,135.410)
C4: (55.414,142.194,136.788)
P: (51.142,138.161,138.874)
C4': (52.190,141.481,139.992)
C2': (52.602,143.572,138.926)
C2: (57.556,141.681,136.771)
N1: (57.633,141.594,135.437)
N3: (56.503,141.975,137.542)
N6: (56.595,141.759,133.383)
N7: (54.051,142.429,134.982)
N9: (54.146,142.487,137.224)
O5': (51.151,139.324,139.945)
O3': (52.802,143.358,141.339)
Image (generated by PyMOL):