ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0423:0178

Extra

PDB:
ATOM 1 O3' U A 422 66.399 115.091 15.851 1.00 41.44 O
ATOM 2 P A A 423 65.376 114.753 17.035 1.00 42.91 P
ATOM 3 OP1 A A 423 65.454 115.826 18.066 1.00 42.89 O
ATOM 4 OP2 A A 423 65.581 113.326 17.430 1.00 42.25 O
ATOM 5 O5' A A 423 63.955 114.908 16.342 1.00 41.37 O
ATOM 6 C5' A A 423 63.601 116.119 15.656 1.00 39.76 C
ATOM 7 C4' A A 423 62.294 115.925 14.942 1.00 39.82 C
ATOM 8 O4' A A 423 62.453 114.870 13.964 1.00 40.36 O
ATOM 9 C3' A A 423 61.179 115.451 15.854 1.00 40.33 C
ATOM 10 O3' A A 423 60.505 116.580 16.388 1.00 44.71 O
ATOM 11 C2' A A 423 60.293 114.663 14.907 1.00 39.39 C
ATOM 12 O2' A A 423 59.523 115.540 14.121 1.00 40.58 O
ATOM 13 C1' A A 423 61.334 114.009 13.999 1.00 37.87 C
ATOM 14 N9 A A 423 61.812 112.693 14.420 1.00 37.76 N
ATOM 15 C8 A A 423 63.006 112.387 15.043 1.00 37.20 C
ATOM 16 N7 A A 423 63.198 111.098 15.218 1.00 37.18 N
ATOM 17 C5 A A 423 62.048 110.519 14.696 1.00 36.90 C
ATOM 18 C6 A A 423 61.644 109.180 14.560 1.00 36.77 C
ATOM 19 N6 A A 423 62.389 108.137 14.935 1.00 36.73 N
ATOM 20 N1 A A 423 60.435 108.944 14.008 1.00 37.23 N
ATOM 21 C2 A A 423 59.694 109.992 13.609 1.00 38.55 C
ATOM 22 N3 A A 423 59.970 111.294 13.669 1.00 36.95 N
ATOM 23 C4 A A 423 61.175 111.492 14.226 1.00 36.76 C
ATOM 24 P A A 424 59.743 116.466 17.791 1.00 45.06 P
ATOM 25 OP1 A A 424 58.916 117.694 17.966 1.00 45.10 O
ATOM 26 OP2 A A 424 60.766 116.113 18.810 1.00 45.30 O
ATOM 27 O5' A A 424 58.763 115.228 17.577 1.00 46.38 O
TER

ATOM 1 O3' A B 177 71.604 107.101 24.333 1.00 37.80 O
ATOM 2 P G B 178 72.650 106.772 23.176 1.00 40.29 P
ATOM 3 OP1 G B 178 73.380 105.539 23.610 1.00 40.62 O
ATOM 4 OP2 G B 178 73.412 108.017 22.883 1.00 41.79 O
ATOM 5 O5' G B 178 71.729 106.421 21.922 1.00 39.67 O
ATOM 6 C5' G B 178 71.013 105.178 21.875 1.00 38.94 C
ATOM 7 C4' G B 178 70.062 105.160 20.704 1.00 38.49 C
ATOM 8 O4' G B 178 69.045 106.176 20.881 1.00 36.71 O
ATOM 9 C3' G B 178 70.667 105.448 19.338 1.00 37.81 C
ATOM 10 O3' G B 178 71.241 104.248 18.809 1.00 38.82 O
ATOM 11 C2' G B 178 69.441 105.898 18.555 1.00 37.72 C
ATOM 12 O2' G B 178 68.623 104.804 18.189 1.00 38.25 O
ATOM 13 C1' G B 178 68.678 106.692 19.618 1.00 37.78 C
ATOM 14 N9 G B 178 68.946 108.126 19.624 1.00 39.75 N
ATOM 15 C8 G B 178 69.991 108.781 20.238 1.00 39.39 C
ATOM 16 N7 G B 178 69.921 110.080 20.118 1.00 39.52 N
ATOM 17 C5 G B 178 68.774 110.293 19.363 1.00 40.42 C
ATOM 18 C6 G B 178 68.187 111.500 18.906 1.00 42.50 C
ATOM 19 O6 G B 178 68.578 112.662 19.082 1.00 43.15 O
ATOM 20 N1 G B 178 67.024 111.258 18.168 1.00 43.21 N
ATOM 21 C2 G B 178 66.500 110.012 17.901 1.00 41.24 C
ATOM 22 N2 G B 178 65.361 109.978 17.179 1.00 38.96 N
ATOM 23 N3 G B 178 67.050 108.883 18.316 1.00 40.00 N
ATOM 24 C4 G B 178 68.171 109.097 19.038 1.00 39.52 C
ATOM 25 P A B 179 72.612 104.304 17.969 1.00 40.44 P
ATOM 26 OP1 A B 179 73.161 102.918 17.915 1.00 38.71 O
ATOM 27 OP2 A B 179 73.472 105.398 18.487 1.00 42.21 O
ATOM 28 O5' A B 179 72.105 104.718 16.515 1.00 41.74 O
TER

Atoms:
OP1: (65.454,115.826,18.066)
OP2: (65.581,113.326,17.430)
C3': (61.179,115.451,15.854)
C1': (61.334,114.009,13.999)
C5': (63.601,116.119,15.656)
O4': (62.453,114.870,13.964)
C8: (63.006,112.387,15.043)
O2': (59.523,115.540,14.121)
C6: (61.644,109.180,14.560)
C5: (62.048,110.519,14.696)
C4: (61.175,111.492,14.226)
P: (65.376,114.753,17.035)
C4': (62.294,115.925,14.942)
C2': (60.293,114.663,14.907)
C2: (59.694,109.992,13.609)
N1: (60.435,108.944,14.008)
N3: (59.970,111.294,13.669)
N6: (62.389,108.137,14.935)
N7: (63.198,111.098,15.218)
N9: (61.812,112.693,14.420)
O5': (63.955,114.908,16.342)
O3': (60.505,116.580,16.388)
OP1: (73.380,105.539,23.610)
OP2: (73.412,108.017,22.883)
C3': (70.667,105.448,19.338)
C1': (68.678,106.692,19.618)
C5': (71.013,105.178,21.875)
O6: (68.578,112.662,19.082)
O4': (69.045,106.176,20.881)
C8: (69.991,108.781,20.238)
C2: (66.500,110.012,17.901)
C6: (68.187,111.500,18.906)
C5: (68.774,110.293,19.363)
C4: (68.171,109.097,19.038)
P: (72.650,106.772,23.176)
C4': (70.062,105.160,20.704)
C2': (69.441,105.898,18.555)
O2': (68.623,104.804,18.189)
N1: (67.024,111.258,18.168)
N2: (65.361,109.978,17.179)
N3: (67.050,108.883,18.316)
N7: (69.921,110.080,20.118)
N9: (68.946,108.126,19.624)
O5': (71.729,106.421,21.922)
O3': (71.241,104.248,18.809)
Image (generated by PyMOL):
PyMOL image
show in jmol