Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A427:A219
Extra
PDB:
ATOM 1 O3' U A 426 -58.038 -57.705 82.416 1.00 3.54 O
ATOM 2 P A A 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 3 OP1 A A 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 4 OP2 A A 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 5 O5' A A 427 -58.506 -59.894 81.300 1.00 1.59 O
ATOM 6 C5' A A 427 -57.495 -60.777 80.877 1.00 1.59 C
ATOM 7 C4' A A 427 -57.452 -61.920 81.805 1.00 1.59 C
ATOM 8 O4' A A 427 -58.002 -61.470 83.046 1.00 1.59 O
ATOM 9 C3' A A 427 -58.312 -63.113 81.416 1.00 1.59 C
ATOM 10 O3' A A 427 -57.624 -64.029 80.620 1.00 1.59 O
ATOM 11 C2' A A 427 -58.711 -63.696 82.741 1.00 1.59 C
ATOM 12 O2' A A 427 -57.675 -64.501 83.259 1.00 1.59 O
ATOM 13 C1' A A 427 -58.816 -62.457 83.595 1.00 1.59 C
ATOM 14 N9 A A 427 -60.179 -61.942 83.684 1.00 1.48 N
ATOM 15 C8 A A 427 -60.712 -60.755 83.267 1.00 1.48 C
ATOM 16 N7 A A 427 -61.971 -60.651 83.620 1.00 1.48 N
ATOM 17 C5 A A 427 -62.230 -61.825 84.315 1.00 1.48 C
ATOM 18 C6 A A 427 -63.359 -62.321 84.953 1.00 1.48 C
ATOM 19 N6 A A 427 -64.488 -61.637 84.962 1.00 1.48 N
ATOM 20 N1 A A 427 -63.311 -63.536 85.552 1.00 1.48 N
ATOM 21 C2 A A 427 -62.146 -64.196 85.509 1.00 1.48 C
ATOM 22 N3 A A 427 -60.994 -63.837 84.938 1.00 1.48 N
ATOM 23 C4 A A 427 -61.132 -62.631 84.361 1.00 1.48 C
ATOM 24 P A A 428 -58.125 -64.332 79.143 1.00 1.04 P
ATOM 25 OP1 A A 428 -56.913 -64.569 78.318 1.00 1.04 O
ATOM 26 OP2 A A 428 -59.046 -63.227 78.753 1.00 1.04 O
ATOM 27 O5' A A 428 -58.946 -65.688 79.332 1.00 1.04 O
TER
ATOM 1 O3' A B 218 -67.904 -52.057 76.447 1.00 0.04 O
ATOM 2 P G B 219 -67.587 -50.874 77.496 1.00 0.01 P
ATOM 3 OP1 G B 219 -68.588 -49.801 77.264 1.00 0.01 O
ATOM 4 OP2 G B 219 -66.141 -50.540 77.348 1.00 0.01 O
ATOM 5 O5' G B 219 -67.845 -51.581 78.905 1.00 0.01 O
ATOM 6 C5' G B 219 -69.042 -52.310 79.142 1.00 0.01 C
ATOM 7 C4' G B 219 -68.845 -53.429 80.138 1.00 0.01 C
ATOM 8 O4' G B 219 -68.039 -54.463 79.549 1.00 0.01 O
ATOM 9 C3' G B 219 -68.121 -53.080 81.429 1.00 0.01 C
ATOM 10 O3' G B 219 -68.977 -52.540 82.403 1.00 0.01 O
ATOM 11 C2' G B 219 -67.567 -54.416 81.854 1.00 0.01 C
ATOM 12 O2' G B 219 -68.584 -55.204 82.461 1.00 0.01 O
ATOM 13 C1' G B 219 -67.200 -55.033 80.521 1.00 0.01 C
ATOM 14 N9 G B 219 -65.807 -54.750 80.151 1.00 0.01 N
ATOM 15 C8 G B 219 -65.381 -53.740 79.333 1.00 0.01 C
ATOM 16 N7 G B 219 -64.097 -53.716 79.168 1.00 0.01 N
ATOM 17 C5 G B 219 -63.646 -54.790 79.920 1.00 0.01 C
ATOM 18 C6 G B 219 -62.316 -55.264 80.123 1.00 0.01 C
ATOM 19 O6 G B 219 -61.236 -54.822 79.669 1.00 0.01 O
ATOM 20 N1 G B 219 -62.344 -56.379 80.965 1.00 0.01 N
ATOM 21 C2 G B 219 -63.468 -56.933 81.525 1.00 0.01 C
ATOM 22 N2 G B 219 -63.259 -58.001 82.296 1.00 0.01 N
ATOM 23 N3 G B 219 -64.692 -56.499 81.340 1.00 0.01 N
ATOM 24 C4 G B 219 -64.700 -55.437 80.533 1.00 0.01 C
ATOM 25 P A B 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 26 OP1 A B 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 27 OP2 A B 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 28 O5' A B 220 -68.773 -51.075 84.376 1.00 0.09 O
TER
ATOM 2 P A A 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 3 OP1 A A 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 4 OP2 A A 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 5 O5' A A 427 -58.506 -59.894 81.300 1.00 1.59 O
ATOM 6 C5' A A 427 -57.495 -60.777 80.877 1.00 1.59 C
ATOM 7 C4' A A 427 -57.452 -61.920 81.805 1.00 1.59 C
ATOM 8 O4' A A 427 -58.002 -61.470 83.046 1.00 1.59 O
ATOM 9 C3' A A 427 -58.312 -63.113 81.416 1.00 1.59 C
ATOM 10 O3' A A 427 -57.624 -64.029 80.620 1.00 1.59 O
ATOM 11 C2' A A 427 -58.711 -63.696 82.741 1.00 1.59 C
ATOM 12 O2' A A 427 -57.675 -64.501 83.259 1.00 1.59 O
ATOM 13 C1' A A 427 -58.816 -62.457 83.595 1.00 1.59 C
ATOM 14 N9 A A 427 -60.179 -61.942 83.684 1.00 1.48 N
ATOM 15 C8 A A 427 -60.712 -60.755 83.267 1.00 1.48 C
ATOM 16 N7 A A 427 -61.971 -60.651 83.620 1.00 1.48 N
ATOM 17 C5 A A 427 -62.230 -61.825 84.315 1.00 1.48 C
ATOM 18 C6 A A 427 -63.359 -62.321 84.953 1.00 1.48 C
ATOM 19 N6 A A 427 -64.488 -61.637 84.962 1.00 1.48 N
ATOM 20 N1 A A 427 -63.311 -63.536 85.552 1.00 1.48 N
ATOM 21 C2 A A 427 -62.146 -64.196 85.509 1.00 1.48 C
ATOM 22 N3 A A 427 -60.994 -63.837 84.938 1.00 1.48 N
ATOM 23 C4 A A 427 -61.132 -62.631 84.361 1.00 1.48 C
ATOM 24 P A A 428 -58.125 -64.332 79.143 1.00 1.04 P
ATOM 25 OP1 A A 428 -56.913 -64.569 78.318 1.00 1.04 O
ATOM 26 OP2 A A 428 -59.046 -63.227 78.753 1.00 1.04 O
ATOM 27 O5' A A 428 -58.946 -65.688 79.332 1.00 1.04 O
TER
ATOM 1 O3' A B 218 -67.904 -52.057 76.447 1.00 0.04 O
ATOM 2 P G B 219 -67.587 -50.874 77.496 1.00 0.01 P
ATOM 3 OP1 G B 219 -68.588 -49.801 77.264 1.00 0.01 O
ATOM 4 OP2 G B 219 -66.141 -50.540 77.348 1.00 0.01 O
ATOM 5 O5' G B 219 -67.845 -51.581 78.905 1.00 0.01 O
ATOM 6 C5' G B 219 -69.042 -52.310 79.142 1.00 0.01 C
ATOM 7 C4' G B 219 -68.845 -53.429 80.138 1.00 0.01 C
ATOM 8 O4' G B 219 -68.039 -54.463 79.549 1.00 0.01 O
ATOM 9 C3' G B 219 -68.121 -53.080 81.429 1.00 0.01 C
ATOM 10 O3' G B 219 -68.977 -52.540 82.403 1.00 0.01 O
ATOM 11 C2' G B 219 -67.567 -54.416 81.854 1.00 0.01 C
ATOM 12 O2' G B 219 -68.584 -55.204 82.461 1.00 0.01 O
ATOM 13 C1' G B 219 -67.200 -55.033 80.521 1.00 0.01 C
ATOM 14 N9 G B 219 -65.807 -54.750 80.151 1.00 0.01 N
ATOM 15 C8 G B 219 -65.381 -53.740 79.333 1.00 0.01 C
ATOM 16 N7 G B 219 -64.097 -53.716 79.168 1.00 0.01 N
ATOM 17 C5 G B 219 -63.646 -54.790 79.920 1.00 0.01 C
ATOM 18 C6 G B 219 -62.316 -55.264 80.123 1.00 0.01 C
ATOM 19 O6 G B 219 -61.236 -54.822 79.669 1.00 0.01 O
ATOM 20 N1 G B 219 -62.344 -56.379 80.965 1.00 0.01 N
ATOM 21 C2 G B 219 -63.468 -56.933 81.525 1.00 0.01 C
ATOM 22 N2 G B 219 -63.259 -58.001 82.296 1.00 0.01 N
ATOM 23 N3 G B 219 -64.692 -56.499 81.340 1.00 0.01 N
ATOM 24 C4 G B 219 -64.700 -55.437 80.533 1.00 0.01 C
ATOM 25 P A B 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 26 OP1 A B 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 27 OP2 A B 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 28 O5' A B 220 -68.773 -51.075 84.376 1.00 0.09 O
TER
Atoms:
OP1: (-57.252,-58.068,80.066)
OP2: (-59.788,-57.832,80.626)
C3': (-58.312,-63.113,81.416)
C1': (-58.816,-62.457,83.595)
C5': (-57.495,-60.777,80.877)
O4': (-58.002,-61.470,83.046)
C8: (-60.712,-60.755,83.267)
O2': (-57.675,-64.501,83.259)
C6: (-63.359,-62.321,84.953)
C5: (-62.230,-61.825,84.315)
C4: (-61.132,-62.631,84.361)
P: (-58.417,-58.343,80.989)
C4': (-57.452,-61.920,81.805)
C2': (-58.711,-63.696,82.741)
C2: (-62.146,-64.196,85.509)
N1: (-63.311,-63.536,85.552)
N3: (-60.994,-63.837,84.938)
N6: (-64.488,-61.637,84.962)
N7: (-61.971,-60.651,83.620)
N9: (-60.179,-61.942,83.684)
O5': (-58.506,-59.894,81.300)
O3': (-57.624,-64.029,80.620)
OP2: (-59.788,-57.832,80.626)
C3': (-58.312,-63.113,81.416)
C1': (-58.816,-62.457,83.595)
C5': (-57.495,-60.777,80.877)
O4': (-58.002,-61.470,83.046)
C8: (-60.712,-60.755,83.267)
O2': (-57.675,-64.501,83.259)
C6: (-63.359,-62.321,84.953)
C5: (-62.230,-61.825,84.315)
C4: (-61.132,-62.631,84.361)
P: (-58.417,-58.343,80.989)
C4': (-57.452,-61.920,81.805)
C2': (-58.711,-63.696,82.741)
C2: (-62.146,-64.196,85.509)
N1: (-63.311,-63.536,85.552)
N3: (-60.994,-63.837,84.938)
N6: (-64.488,-61.637,84.962)
N7: (-61.971,-60.651,83.620)
N9: (-60.179,-61.942,83.684)
O5': (-58.506,-59.894,81.300)
O3': (-57.624,-64.029,80.620)
OP1: (-68.588,-49.801,77.264)
OP2: (-66.141,-50.540,77.348)
C3': (-68.121,-53.080,81.429)
C1': (-67.200,-55.033,80.521)
C5': (-69.042,-52.310,79.142)
O6: (-61.236,-54.822,79.669)
O4': (-68.039,-54.463,79.549)
C8: (-65.381,-53.740,79.333)
C2: (-63.468,-56.933,81.525)
C6: (-62.316,-55.264,80.123)
C5: (-63.646,-54.790,79.920)
C4: (-64.700,-55.437,80.533)
P: (-67.587,-50.874,77.496)
C4': (-68.845,-53.429,80.138)
C2': (-67.567,-54.416,81.854)
O2': (-68.584,-55.204,82.461)
N1: (-62.344,-56.379,80.965)
N2: (-63.259,-58.001,82.296)
N3: (-64.692,-56.499,81.340)
N7: (-64.097,-53.716,79.168)
N9: (-65.807,-54.750,80.151)
O5': (-67.845,-51.581,78.905)
O3': (-68.977,-52.540,82.403)
OP2: (-66.141,-50.540,77.348)
C3': (-68.121,-53.080,81.429)
C1': (-67.200,-55.033,80.521)
C5': (-69.042,-52.310,79.142)
O6: (-61.236,-54.822,79.669)
O4': (-68.039,-54.463,79.549)
C8: (-65.381,-53.740,79.333)
C2: (-63.468,-56.933,81.525)
C6: (-62.316,-55.264,80.123)
C5: (-63.646,-54.790,79.920)
C4: (-64.700,-55.437,80.533)
P: (-67.587,-50.874,77.496)
C4': (-68.845,-53.429,80.138)
C2': (-67.567,-54.416,81.854)
O2': (-68.584,-55.204,82.461)
N1: (-62.344,-56.379,80.965)
N2: (-63.259,-58.001,82.296)
N3: (-64.692,-56.499,81.340)
N7: (-64.097,-53.716,79.168)
N9: (-65.807,-54.750,80.151)
O5': (-67.845,-51.581,78.905)
O3': (-68.977,-52.540,82.403)
Image (generated by PyMOL):