ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01289:01286

Extra

PDB:
ATOM 1 O3' A A1288 20.680 113.656 77.232 1.00 33.95 O
ATOM 2 P A A1289 20.734 114.901 76.203 1.00 34.18 P
ATOM 3 OP1 A A1289 21.459 115.985 76.915 1.00 34.38 O
ATOM 4 OP2 A A1289 19.400 115.186 75.641 1.00 32.38 O
ATOM 5 O5' A A1289 21.635 114.369 74.997 1.00 34.51 O
ATOM 6 C5' A A1289 23.074 114.398 75.057 1.00 31.74 C
ATOM 7 C4' A A1289 23.659 113.801 73.792 1.00 32.76 C
ATOM 8 O4' A A1289 23.149 112.453 73.658 1.00 31.97 O
ATOM 9 C3' A A1289 23.304 114.478 72.470 1.00 31.58 C
ATOM 10 O3' A A1289 24.244 115.482 72.108 1.00 34.99 O
ATOM 11 C2' A A1289 23.469 113.338 71.473 1.00 31.23 C
ATOM 12 O2' A A1289 24.811 113.109 71.096 1.00 30.11 O
ATOM 13 C1' A A1289 22.973 112.144 72.287 1.00 32.10 C
ATOM 14 N9 A A1289 21.559 111.866 72.051 1.00 31.28 N
ATOM 15 C8 A A1289 20.478 112.648 72.370 1.00 30.37 C
ATOM 16 N7 A A1289 19.334 112.132 72.010 1.00 29.52 N
ATOM 17 C5 A A1289 19.682 110.924 71.419 1.00 29.76 C
ATOM 18 C6 A A1289 18.914 109.896 70.829 1.00 29.68 C
ATOM 19 N6 A A1289 17.588 109.924 70.742 1.00 27.88 N
ATOM 20 N1 A A1289 19.572 108.827 70.326 1.00 28.81 N
ATOM 21 C2 A A1289 20.907 108.801 70.418 1.00 28.42 C
ATOM 22 N3 A A1289 21.735 109.699 70.950 1.00 30.83 N
ATOM 23 C4 A A1289 21.049 110.749 71.438 1.00 29.74 C
ATOM 24 P A A1290 23.875 117.039 72.237 1.00 36.63 P
ATOM 25 OP1 A A1290 25.117 117.745 71.860 1.00 40.52 O
ATOM 26 OP2 A A1290 23.268 117.272 73.562 1.00 41.77 O
ATOM 27 O5' A A1290 22.730 117.386 71.176 1.00 40.81 O
TER

ATOM 1 O3' U B1285 7.489 112.593 75.787 1.00 38.18 O
ATOM 2 P G B1286 8.131 111.600 76.870 1.00 39.63 P
ATOM 3 OP1 G B1286 7.348 110.333 76.826 1.00 39.81 O
ATOM 4 OP2 G B1286 8.280 112.322 78.152 1.00 37.44 O
ATOM 5 O5' G B1286 9.577 111.269 76.294 1.00 38.23 O
ATOM 6 C5' G B1286 9.719 110.416 75.149 1.00 36.77 C
ATOM 7 C4' G B1286 11.159 110.363 74.700 1.00 38.06 C
ATOM 8 O4' G B1286 11.605 111.689 74.291 1.00 38.20 O
ATOM 9 C3' G B1286 12.186 109.984 75.753 1.00 37.71 C
ATOM 10 O3' G B1286 12.203 108.585 76.006 1.00 36.64 O
ATOM 11 C2' G B1286 13.480 110.467 75.101 1.00 35.81 C
ATOM 12 O2' G B1286 14.000 109.573 74.142 1.00 38.33 O
ATOM 13 C1' G B1286 13.013 111.752 74.412 1.00 35.56 C
ATOM 14 N9 G B1286 13.376 112.910 75.214 1.00 36.60 N
ATOM 15 C8 G B1286 12.610 113.602 76.121 1.00 34.84 C
ATOM 16 N7 G B1286 13.280 114.529 76.750 1.00 34.18 N
ATOM 17 C5 G B1286 14.559 114.452 76.210 1.00 36.87 C
ATOM 18 C6 G B1286 15.743 115.174 76.520 1.00 36.85 C
ATOM 19 O6 G B1286 15.913 116.047 77.376 1.00 38.36 O
ATOM 20 N1 G B1286 16.807 114.774 75.720 1.00 37.44 N
ATOM 21 C2 G B1286 16.751 113.800 74.753 1.00 35.34 C
ATOM 22 N2 G B1286 17.878 113.563 74.068 1.00 32.42 N
ATOM 23 N3 G B1286 15.669 113.110 74.474 1.00 34.83 N
ATOM 24 C4 G B1286 14.619 113.483 75.237 1.00 36.38 C
ATOM 25 P A B1287 12.109 108.052 77.522 1.00 36.26 P
ATOM 26 OP1 A B1287 12.118 106.575 77.465 1.00 36.48 O
ATOM 27 OP2 A B1287 10.981 108.751 78.169 1.00 35.66 O
ATOM 28 O5' A B1287 13.464 108.551 78.205 1.00 37.23 O
TER

Atoms:
OP1: (21.459,115.985,76.915)
OP2: (19.400,115.186,75.641)
C3': (23.304,114.478,72.470)
C1': (22.973,112.144,72.287)
C5': (23.074,114.398,75.057)
O4': (23.149,112.453,73.658)
C8: (20.478,112.648,72.370)
O2': (24.811,113.109,71.096)
C6: (18.914,109.896,70.829)
C5: (19.682,110.924,71.419)
C4: (21.049,110.749,71.438)
P: (20.734,114.901,76.203)
C4': (23.659,113.801,73.792)
C2': (23.469,113.338,71.473)
C2: (20.907,108.801,70.418)
N1: (19.572,108.827,70.326)
N3: (21.735,109.699,70.950)
N6: (17.588,109.924,70.742)
N7: (19.334,112.132,72.010)
N9: (21.559,111.866,72.051)
O5': (21.635,114.369,74.997)
O3': (24.244,115.482,72.108)
OP1: (7.348,110.333,76.826)
OP2: (8.280,112.322,78.152)
C3': (12.186,109.984,75.753)
C1': (13.013,111.752,74.412)
C5': (9.719,110.416,75.149)
O6: (15.913,116.047,77.376)
O4': (11.605,111.689,74.291)
C8: (12.610,113.602,76.121)
C2: (16.751,113.800,74.753)
C6: (15.743,115.174,76.520)
C5: (14.559,114.452,76.210)
C4: (14.619,113.483,75.237)
P: (8.131,111.600,76.870)
C4': (11.159,110.363,74.700)
C2': (13.480,110.467,75.101)
O2': (14.000,109.573,74.142)
N1: (16.807,114.774,75.720)
N2: (17.878,113.563,74.068)
N3: (15.669,113.110,74.474)
N7: (13.280,114.529,76.750)
N9: (13.376,112.910,75.214)
O5': (9.577,111.269,76.294)
O3': (12.203,108.585,76.006)
Image (generated by PyMOL):
PyMOL image
show in jmol