ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1240:A1237

Extra

PDB:
ATOM 1 O3' A A1239 256.086 130.345 14.785 1.00100.94 O
ATOM 2 P A A1240 255.142 130.871 15.965 1.00 67.08 P
ATOM 3 OP1 A A1240 254.242 131.880 15.345 1.00 74.17 O
ATOM 4 OP2 A A1240 256.011 131.267 17.106 1.00 74.17 O
ATOM 5 O5' A A1240 254.292 129.592 16.410 1.00 67.08 O
ATOM 6 C5' A A1240 253.154 129.150 15.637 1.00 67.08 C
ATOM 7 C4' A A1240 252.653 127.815 16.143 1.00 67.08 C
ATOM 8 O4' A A1240 253.753 126.876 16.139 1.00 67.08 O
ATOM 9 C3' A A1240 252.123 127.783 17.568 1.00 67.08 C
ATOM 10 O3' A A1240 250.744 128.141 17.625 1.00 67.08 O
ATOM 11 C2' A A1240 252.345 126.331 17.992 1.00 67.08 C
ATOM 12 O2' A A1240 251.291 125.448 17.661 1.00 67.08 O
ATOM 13 C1' A A1240 253.605 125.959 17.208 1.00 67.08 C
ATOM 14 N9 A A1240 254.830 125.969 18.007 1.00 74.17 N
ATOM 15 C8 A A1240 255.529 127.044 18.502 1.00 74.17 C
ATOM 16 N7 A A1240 256.585 126.709 19.203 1.00 74.17 N
ATOM 17 C5 A A1240 256.583 125.322 19.164 1.00 74.17 C
ATOM 18 C6 A A1240 257.446 124.357 19.714 1.00 74.17 C
ATOM 19 N6 A A1240 258.507 124.653 20.457 1.00 74.17 N
ATOM 20 N1 A A1240 257.173 123.060 19.475 1.00 74.17 N
ATOM 21 C2 A A1240 256.099 122.759 18.737 1.00 74.17 C
ATOM 22 N3 A A1240 255.208 123.573 18.170 1.00 74.17 N
ATOM 23 C4 A A1240 255.513 124.856 18.424 1.00 74.17 C
ATOM 24 P C A1241 250.295 129.469 18.410 1.00 88.32 P
ATOM 25 OP1 C A1241 248.817 129.416 18.481 1.00 73.13 O
ATOM 26 OP2 C A1241 250.957 130.631 17.749 1.00 73.13 O
ATOM 27 O5' C A1241 250.899 129.292 19.881 1.00 88.32 O
TER

ATOM 1 O3' G B1236 266.695 131.850 22.893 1.00106.38 O
ATOM 2 P G B1237 267.127 131.634 21.365 1.00117.34 P
ATOM 3 OP1 G B1237 268.443 130.943 21.378 1.00 75.85 O
ATOM 4 OP2 G B1237 266.975 132.930 20.652 1.00 75.85 O
ATOM 5 O5' G B1237 266.030 130.626 20.802 1.00117.34 O
ATOM 6 C5' G B1237 265.931 129.285 21.320 1.00117.34 C
ATOM 7 C4' G B1237 264.674 128.607 20.818 1.00117.34 C
ATOM 8 O4' G B1237 263.497 129.265 21.361 1.00117.34 O
ATOM 9 C3' G B1237 264.431 128.611 19.317 1.00117.34 C
ATOM 10 O3' G B1237 265.173 127.623 18.618 1.00117.34 O
ATOM 11 C2' G B1237 262.934 128.356 19.239 1.00117.34 C
ATOM 12 O2' G B1237 262.626 126.987 19.406 1.00117.34 O
ATOM 13 C1' G B1237 262.425 129.148 20.443 1.00117.34 C
ATOM 14 N9 G B1237 261.994 130.480 20.025 1.00 75.85 N
ATOM 15 C8 G B1237 262.747 131.627 19.930 1.00 75.85 C
ATOM 16 N7 G B1237 262.081 132.640 19.440 1.00 75.85 N
ATOM 17 C5 G B1237 260.807 132.136 19.216 1.00 75.85 C
ATOM 18 C6 G B1237 259.641 132.761 18.676 1.00 75.85 C
ATOM 19 O6 G B1237 259.499 133.928 18.280 1.00 75.85 O
ATOM 20 N1 G B1237 258.567 131.875 18.621 1.00 75.85 N
ATOM 21 C2 G B1237 258.602 130.562 19.032 1.00 75.85 C
ATOM 22 N2 G B1237 257.465 129.861 18.899 1.00 75.85 N
ATOM 23 N3 G B1237 259.673 129.973 19.535 1.00 75.85 N
ATOM 24 C4 G B1237 260.732 130.811 19.593 1.00 75.85 C
ATOM 25 P C B1238 266.018 128.050 17.315 1.00109.81 P
ATOM 26 OP1 C B1238 266.779 126.846 16.879 1.00 87.90 O
ATOM 27 OP2 C B1238 266.748 129.310 17.629 1.00 87.90 O
ATOM 28 O5' C B1238 264.921 128.411 16.210 1.00109.81 O
TER

Atoms:
OP1: (254.242,131.880,15.345)
OP2: (256.011,131.267,17.106)
C3': (252.123,127.783,17.568)
C1': (253.605,125.959,17.208)
C5': (253.154,129.150,15.637)
O4': (253.753,126.876,16.139)
C8: (255.529,127.044,18.502)
O2': (251.291,125.448,17.661)
C6: (257.446,124.357,19.714)
C5: (256.583,125.322,19.164)
C4: (255.513,124.856,18.424)
P: (255.142,130.871,15.965)
C4': (252.653,127.815,16.143)
C2': (252.345,126.331,17.992)
C2: (256.099,122.759,18.737)
N1: (257.173,123.060,19.475)
N3: (255.208,123.573,18.170)
N6: (258.507,124.653,20.457)
N7: (256.585,126.709,19.203)
N9: (254.830,125.969,18.007)
O5': (254.292,129.592,16.410)
O3': (250.744,128.141,17.625)
OP1: (268.443,130.943,21.378)
OP2: (266.975,132.930,20.652)
C3': (264.431,128.611,19.317)
C1': (262.425,129.148,20.443)
C5': (265.931,129.285,21.320)
O6: (259.499,133.928,18.280)
O4': (263.497,129.265,21.361)
C8: (262.747,131.627,19.930)
C2: (258.602,130.562,19.032)
C6: (259.641,132.761,18.676)
C5: (260.807,132.136,19.216)
C4: (260.732,130.811,19.593)
P: (267.127,131.634,21.365)
C4': (264.674,128.607,20.818)
C2': (262.934,128.356,19.239)
O2': (262.626,126.987,19.406)
N1: (258.567,131.875,18.621)
N2: (257.465,129.861,18.899)
N3: (259.673,129.973,19.535)
N7: (262.081,132.640,19.440)
N9: (261.994,130.480,20.025)
O5': (266.030,130.626,20.802)
O3': (265.173,127.623,18.618)
Image (generated by PyMOL):
PyMOL image
show in jmol