ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A423:A178

Extra

PDB:
ATOM 1 O3' U A 422 66.858 115.831 16.390 1.00 50.82 O
ATOM 2 P A A 423 65.841 115.502 17.597 1.00 51.48 P
ATOM 3 OP1 A A 423 66.109 116.551 18.590 1.00 51.48 O
ATOM 4 OP2 A A 423 65.918 114.067 17.994 1.00 50.90 O
ATOM 5 O5' A A 423 64.386 115.749 16.992 1.00 51.91 O
ATOM 6 C5' A A 423 64.064 116.980 16.313 1.00 52.75 C
ATOM 7 C4' A A 423 62.774 116.831 15.543 1.00 53.61 C
ATOM 8 O4' A A 423 62.929 115.807 14.532 1.00 54.71 O
ATOM 9 C3' A A 423 61.603 116.388 16.396 1.00 54.74 C
ATOM 10 O3' A A 423 60.944 117.525 16.945 1.00 55.17 O
ATOM 11 C2' A A 423 60.746 115.566 15.434 1.00 55.23 C
ATOM 12 O2' A A 423 59.899 116.340 14.604 1.00 57.58 O
ATOM 13 C1' A A 423 61.820 114.927 14.554 1.00 54.83 C
ATOM 14 N9 A A 423 62.311 113.608 14.960 1.00 54.79 N
ATOM 15 C8 A A 423 63.523 113.282 15.540 1.00 54.13 C
ATOM 16 N7 A A 423 63.688 111.995 15.735 1.00 53.75 N
ATOM 17 C5 A A 423 62.506 111.436 15.264 1.00 54.67 C
ATOM 18 C6 A A 423 62.052 110.106 15.177 1.00 54.90 C
ATOM 19 N6 A A 423 62.756 109.053 15.586 1.00 54.88 N
ATOM 20 N1 A A 423 60.829 109.895 14.650 1.00 55.77 N
ATOM 21 C2 A A 423 60.112 110.953 14.246 1.00 56.76 C
ATOM 22 N3 A A 423 60.423 112.246 14.275 1.00 55.72 N
ATOM 23 C4 A A 423 61.646 112.422 14.796 1.00 54.63 C
ATOM 24 P A A 424 60.162 117.387 18.336 1.00 55.23 P
ATOM 25 OP1 A A 424 59.214 118.520 18.520 1.00 56.08 O
ATOM 26 OP2 A A 424 61.152 117.085 19.395 1.00 56.55 O
ATOM 27 O5' A A 424 59.264 116.111 18.067 1.00 55.25 O
TER

ATOM 1 O3' A B 177 71.846 107.931 24.987 1.00 47.07 O
ATOM 2 P G B 178 72.922 107.595 23.845 1.00 48.41 P
ATOM 3 OP1 G B 178 73.623 106.369 24.336 1.00 47.17 O
ATOM 4 OP2 G B 178 73.712 108.798 23.511 1.00 46.14 O
ATOM 5 O5' G B 178 72.026 107.209 22.584 1.00 48.15 O
ATOM 6 C5' G B 178 71.289 105.981 22.558 1.00 48.23 C
ATOM 7 C4' G B 178 70.358 105.968 21.375 1.00 49.19 C
ATOM 8 O4' G B 178 69.374 107.028 21.502 1.00 50.03 O
ATOM 9 C3' G B 178 71.026 106.230 20.041 1.00 49.76 C
ATOM 10 O3' G B 178 71.623 105.018 19.581 1.00 51.93 O
ATOM 11 C2' G B 178 69.859 106.726 19.192 1.00 49.95 C
ATOM 12 O2' G B 178 69.035 105.661 18.758 1.00 50.15 O
ATOM 13 C1' G B 178 69.051 107.539 20.217 1.00 49.86 C
ATOM 14 N9 G B 178 69.275 108.989 20.220 1.00 50.19 N
ATOM 15 C8 G B 178 70.328 109.647 20.804 1.00 49.91 C
ATOM 16 N7 G B 178 70.277 110.940 20.653 1.00 49.76 N
ATOM 17 C5 G B 178 69.120 111.160 19.925 1.00 50.68 C
ATOM 18 C6 G B 178 68.562 112.374 19.442 1.00 52.54 C
ATOM 19 O6 G B 178 68.995 113.533 19.577 1.00 53.75 O
ATOM 20 N1 G B 178 67.387 112.149 18.729 1.00 52.11 N
ATOM 21 C2 G B 178 66.823 110.920 18.505 1.00 50.21 C
ATOM 22 N2 G B 178 65.682 110.923 17.787 1.00 49.16 N
ATOM 23 N3 G B 178 67.339 109.774 18.949 1.00 49.56 N
ATOM 24 C4 G B 178 68.482 109.969 19.645 1.00 49.95 C
ATOM 25 P A B 179 73.028 105.059 18.804 1.00 54.70 P
ATOM 26 OP1 A B 179 73.574 103.667 18.861 1.00 53.47 O
ATOM 27 OP2 A B 179 73.846 106.173 19.353 1.00 55.92 O
ATOM 28 O5' A B 179 72.566 105.447 17.320 1.00 55.84 O
TER

Atoms:
OP1: (66.109,116.551,18.590)
OP2: (65.918,114.067,17.994)
C3': (61.603,116.388,16.396)
C1': (61.820,114.927,14.554)
C5': (64.064,116.980,16.313)
O4': (62.929,115.807,14.532)
C8: (63.523,113.282,15.540)
O2': (59.899,116.340,14.604)
C6: (62.052,110.106,15.177)
C5: (62.506,111.436,15.264)
C4: (61.646,112.422,14.796)
P: (65.841,115.502,17.597)
C4': (62.774,116.831,15.543)
C2': (60.746,115.566,15.434)
C2: (60.112,110.953,14.246)
N1: (60.829,109.895,14.650)
N3: (60.423,112.246,14.275)
N6: (62.756,109.053,15.586)
N7: (63.688,111.995,15.735)
N9: (62.311,113.608,14.960)
O5': (64.386,115.749,16.992)
O3': (60.944,117.525,16.945)
OP1: (73.623,106.369,24.336)
OP2: (73.712,108.798,23.511)
C3': (71.026,106.230,20.041)
C1': (69.051,107.539,20.217)
C5': (71.289,105.981,22.558)
O6: (68.995,113.533,19.577)
O4': (69.374,107.028,21.502)
C8: (70.328,109.647,20.804)
C2: (66.823,110.920,18.505)
C6: (68.562,112.374,19.442)
C5: (69.120,111.160,19.925)
C4: (68.482,109.969,19.645)
P: (72.922,107.595,23.845)
C4': (70.358,105.968,21.375)
C2': (69.859,106.726,19.192)
O2': (69.035,105.661,18.758)
N1: (67.387,112.149,18.729)
N2: (65.682,110.923,17.787)
N3: (67.339,109.774,18.949)
N7: (70.277,110.940,20.653)
N9: (69.275,108.989,20.220)
O5': (72.026,107.209,22.584)
O3': (71.623,105.018,19.581)
Image (generated by PyMOL):
PyMOL image
show in jmol