Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02064:02117
Extra
PDB:
ATOM 1 O3' U A2063 94.556 101.945 74.752 1.00 47.29 O
ATOM 2 P A A2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 3 OP1 A A2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 4 OP2 A A2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 5 O5' A A2064 92.056 102.147 74.830 1.00 43.34 O
ATOM 6 C5' A A2064 91.862 100.974 75.640 1.00 40.40 C
ATOM 7 C4' A A2064 90.490 100.416 75.384 1.00 37.54 C
ATOM 8 O4' A A2064 89.502 101.376 75.837 1.00 37.76 O
ATOM 9 C3' A A2064 90.202 100.247 73.907 1.00 36.47 C
ATOM 10 O3' A A2064 90.681 99.007 73.425 1.00 34.97 O
ATOM 11 C2' A A2064 88.694 100.381 73.834 1.00 37.39 C
ATOM 12 O2' A A2064 88.047 99.182 74.204 1.00 39.34 O
ATOM 13 C1' A A2064 88.441 101.453 74.899 1.00 38.60 C
ATOM 14 N9 A A2064 88.346 102.837 74.413 1.00 38.05 N
ATOM 15 C8 A A2064 89.180 103.890 74.704 1.00 37.18 C
ATOM 16 N7 A A2064 88.816 105.023 74.159 1.00 36.23 N
ATOM 17 C5 A A2064 87.673 104.696 73.447 1.00 37.24 C
ATOM 18 C6 A A2064 86.810 105.461 72.650 1.00 37.06 C
ATOM 19 N6 A A2064 86.981 106.760 72.415 1.00 37.79 N
ATOM 20 N1 A A2064 85.754 104.839 72.091 1.00 37.50 N
ATOM 21 C2 A A2064 85.590 103.533 72.316 1.00 38.43 C
ATOM 22 N3 A A2064 86.335 102.702 73.039 1.00 38.89 N
ATOM 23 C4 A A2064 87.374 103.354 73.588 1.00 37.99 C
ATOM 24 P C A2065 91.037 98.856 71.875 1.00 36.98 P
ATOM 25 OP1 C A2065 91.601 97.502 71.657 1.00 38.31 O
ATOM 26 OP2 C A2065 91.807 100.047 71.449 1.00 37.55 O
ATOM 27 O5' C A2065 89.620 98.936 71.169 1.00 35.92 O
TER
ATOM 1 O3' G B2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 2 P G B2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G B2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G B2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G B2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G B2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G B2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G B2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G B2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G B2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G B2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G B2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G B2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G B2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G B2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G B2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G B2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G B2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G B2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G B2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G B2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G B2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G B2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G B2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G B2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G B2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G B2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G B2118 96.603 114.826 69.143 1.00 32.88 O
TER
ATOM 2 P A A2064 93.376 103.015 74.938 1.00 43.90 P
ATOM 3 OP1 A A2064 93.422 103.931 73.772 1.00 42.90 O
ATOM 4 OP2 A A2064 93.434 103.561 76.315 1.00 41.91 O
ATOM 5 O5' A A2064 92.056 102.147 74.830 1.00 43.34 O
ATOM 6 C5' A A2064 91.862 100.974 75.640 1.00 40.40 C
ATOM 7 C4' A A2064 90.490 100.416 75.384 1.00 37.54 C
ATOM 8 O4' A A2064 89.502 101.376 75.837 1.00 37.76 O
ATOM 9 C3' A A2064 90.202 100.247 73.907 1.00 36.47 C
ATOM 10 O3' A A2064 90.681 99.007 73.425 1.00 34.97 O
ATOM 11 C2' A A2064 88.694 100.381 73.834 1.00 37.39 C
ATOM 12 O2' A A2064 88.047 99.182 74.204 1.00 39.34 O
ATOM 13 C1' A A2064 88.441 101.453 74.899 1.00 38.60 C
ATOM 14 N9 A A2064 88.346 102.837 74.413 1.00 38.05 N
ATOM 15 C8 A A2064 89.180 103.890 74.704 1.00 37.18 C
ATOM 16 N7 A A2064 88.816 105.023 74.159 1.00 36.23 N
ATOM 17 C5 A A2064 87.673 104.696 73.447 1.00 37.24 C
ATOM 18 C6 A A2064 86.810 105.461 72.650 1.00 37.06 C
ATOM 19 N6 A A2064 86.981 106.760 72.415 1.00 37.79 N
ATOM 20 N1 A A2064 85.754 104.839 72.091 1.00 37.50 N
ATOM 21 C2 A A2064 85.590 103.533 72.316 1.00 38.43 C
ATOM 22 N3 A A2064 86.335 102.702 73.039 1.00 38.89 N
ATOM 23 C4 A A2064 87.374 103.354 73.588 1.00 37.99 C
ATOM 24 P C A2065 91.037 98.856 71.875 1.00 36.98 P
ATOM 25 OP1 C A2065 91.601 97.502 71.657 1.00 38.31 O
ATOM 26 OP2 C A2065 91.807 100.047 71.449 1.00 37.55 O
ATOM 27 O5' C A2065 89.620 98.936 71.169 1.00 35.92 O
TER
ATOM 1 O3' G B2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 2 P G B2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G B2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G B2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G B2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G B2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G B2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G B2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G B2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G B2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G B2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G B2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G B2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G B2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G B2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G B2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G B2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G B2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G B2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G B2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G B2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G B2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G B2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G B2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G B2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G B2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G B2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G B2118 96.603 114.826 69.143 1.00 32.88 O
TER
Atoms:
OP1: (93.422,103.931,73.772)
OP2: (93.434,103.561,76.315)
C3': (90.202,100.247,73.907)
C1': (88.441,101.453,74.899)
C5': (91.862,100.974,75.640)
O4': (89.502,101.376,75.837)
C8: (89.180,103.890,74.704)
O2': (88.047,99.182,74.204)
C6: (86.810,105.461,72.650)
C5: (87.673,104.696,73.447)
C4: (87.374,103.354,73.588)
P: (93.376,103.015,74.938)
C4': (90.490,100.416,75.384)
C2': (88.694,100.381,73.834)
C2: (85.590,103.533,72.316)
N1: (85.754,104.839,72.091)
N3: (86.335,102.702,73.039)
N6: (86.981,106.760,72.415)
N7: (88.816,105.023,74.159)
N9: (88.346,102.837,74.413)
O5': (92.056,102.147,74.830)
O3': (90.681,99.007,73.425)
OP2: (93.434,103.561,76.315)
C3': (90.202,100.247,73.907)
C1': (88.441,101.453,74.899)
C5': (91.862,100.974,75.640)
O4': (89.502,101.376,75.837)
C8: (89.180,103.890,74.704)
O2': (88.047,99.182,74.204)
C6: (86.810,105.461,72.650)
C5: (87.673,104.696,73.447)
C4: (87.374,103.354,73.588)
P: (93.376,103.015,74.938)
C4': (90.490,100.416,75.384)
C2': (88.694,100.381,73.834)
C2: (85.590,103.533,72.316)
N1: (85.754,104.839,72.091)
N3: (86.335,102.702,73.039)
N6: (86.981,106.760,72.415)
N7: (88.816,105.023,74.159)
N9: (88.346,102.837,74.413)
O5': (92.056,102.147,74.830)
O3': (90.681,99.007,73.425)
OP1: (98.803,107.864,69.990)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
Image (generated by PyMOL):