Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A880:A881
Extra
PDB:
ATOM 1 O3' G A 879 65.260 117.798 55.175 1.00 32.02 O
ATOM 2 P C A 880 64.035 117.044 55.889 1.00 34.80 P
ATOM 3 OP1 C A 880 64.556 116.234 57.005 1.00 34.65 O
ATOM 4 OP2 C A 880 63.182 116.429 54.863 1.00 36.13 O
ATOM 5 O5' C A 880 63.167 118.169 56.573 1.00 33.88 O
ATOM 6 C5' C A 880 61.873 117.847 57.094 1.00 35.05 C
ATOM 7 C4' C A 880 61.572 118.720 58.278 1.00 35.27 C
ATOM 8 O4' C A 880 62.361 118.286 59.416 1.00 36.30 O
ATOM 9 C3' C A 880 61.938 120.177 58.027 1.00 34.80 C
ATOM 10 O3' C A 880 60.985 121.010 58.683 1.00 35.57 O
ATOM 11 C2' C A 880 63.349 120.259 58.618 1.00 34.97 C
ATOM 12 O2' C A 880 63.754 121.542 59.021 1.00 35.19 O
ATOM 13 C1' C A 880 63.206 119.345 59.826 1.00 35.90 C
ATOM 14 N1 C A 880 64.444 118.789 60.418 1.00 35.54 N
ATOM 15 C2 C A 880 64.928 119.374 61.578 1.00 35.98 C
ATOM 16 O2 C A 880 64.361 120.396 62.008 1.00 38.12 O
ATOM 17 N3 C A 880 65.998 118.824 62.205 1.00 34.49 N
ATOM 18 C4 C A 880 66.587 117.741 61.694 1.00 34.74 C
ATOM 19 N4 C A 880 67.620 117.211 62.369 1.00 33.85 N
ATOM 20 C5 C A 880 66.144 117.151 60.479 1.00 34.24 C
ATOM 21 C6 C A 880 65.083 117.706 59.875 1.00 35.65 C
ATOM 22 P A A 881 59.442 121.009 58.196 1.00 35.38 P
ATOM 23 OP1 A A 881 59.335 120.210 56.950 1.00 35.78 O
ATOM 24 OP2 A A 881 58.869 122.366 58.252 1.00 32.06 O
ATOM 25 O5' A A 881 58.719 120.156 59.313 1.00 35.43 O
TER
ATOM 1 O3' C B 880 60.985 121.010 58.683 1.00 35.57 O
ATOM 2 P A B 881 59.442 121.009 58.196 1.00 35.38 P
ATOM 3 OP1 A B 881 59.335 120.210 56.950 1.00 35.78 O
ATOM 4 OP2 A B 881 58.869 122.366 58.252 1.00 32.06 O
ATOM 5 O5' A B 881 58.719 120.156 59.313 1.00 35.43 O
ATOM 6 C5' A B 881 58.753 120.555 60.674 1.00 35.25 C
ATOM 7 C4' A B 881 58.428 119.373 61.537 1.00 36.88 C
ATOM 8 O4' A B 881 57.048 118.987 61.319 1.00 39.08 O
ATOM 9 C3' A B 881 59.261 118.125 61.273 1.00 37.49 C
ATOM 10 O3' A B 881 59.363 117.420 62.498 1.00 37.72 O
ATOM 11 C2' A B 881 58.400 117.329 60.295 1.00 37.29 C
ATOM 12 O2' A B 881 58.596 115.946 60.473 1.00 36.41 O
ATOM 13 C1' A B 881 56.988 117.697 60.749 1.00 39.24 C
ATOM 14 N9 A B 881 56.030 117.758 59.651 1.00 41.42 N
ATOM 15 C8 A B 881 56.173 118.418 58.453 1.00 43.76 C
ATOM 16 N7 A B 881 55.141 118.301 57.656 1.00 44.02 N
ATOM 17 C5 A B 881 54.262 117.501 58.370 1.00 44.19 C
ATOM 18 C6 A B 881 52.998 116.997 58.058 1.00 43.95 C
ATOM 19 N6 A B 881 52.382 117.220 56.894 1.00 43.37 N
ATOM 20 N1 A B 881 52.380 116.238 58.984 1.00 44.14 N
ATOM 21 C2 A B 881 53.009 116.001 60.141 1.00 44.22 C
ATOM 22 N3 A B 881 54.209 116.412 60.551 1.00 44.54 N
ATOM 23 C4 A B 881 54.792 117.167 59.605 1.00 43.66 C
ATOM 24 P A B 882 60.583 117.720 63.503 1.00 37.81 P
ATOM 25 OP1 A B 882 59.991 117.708 64.857 1.00 37.68 O
ATOM 26 OP2 A B 882 61.390 118.896 63.067 1.00 36.42 O
ATOM 27 O5' A B 882 61.488 116.419 63.386 1.00 35.50 O
TER
ATOM 2 P C A 880 64.035 117.044 55.889 1.00 34.80 P
ATOM 3 OP1 C A 880 64.556 116.234 57.005 1.00 34.65 O
ATOM 4 OP2 C A 880 63.182 116.429 54.863 1.00 36.13 O
ATOM 5 O5' C A 880 63.167 118.169 56.573 1.00 33.88 O
ATOM 6 C5' C A 880 61.873 117.847 57.094 1.00 35.05 C
ATOM 7 C4' C A 880 61.572 118.720 58.278 1.00 35.27 C
ATOM 8 O4' C A 880 62.361 118.286 59.416 1.00 36.30 O
ATOM 9 C3' C A 880 61.938 120.177 58.027 1.00 34.80 C
ATOM 10 O3' C A 880 60.985 121.010 58.683 1.00 35.57 O
ATOM 11 C2' C A 880 63.349 120.259 58.618 1.00 34.97 C
ATOM 12 O2' C A 880 63.754 121.542 59.021 1.00 35.19 O
ATOM 13 C1' C A 880 63.206 119.345 59.826 1.00 35.90 C
ATOM 14 N1 C A 880 64.444 118.789 60.418 1.00 35.54 N
ATOM 15 C2 C A 880 64.928 119.374 61.578 1.00 35.98 C
ATOM 16 O2 C A 880 64.361 120.396 62.008 1.00 38.12 O
ATOM 17 N3 C A 880 65.998 118.824 62.205 1.00 34.49 N
ATOM 18 C4 C A 880 66.587 117.741 61.694 1.00 34.74 C
ATOM 19 N4 C A 880 67.620 117.211 62.369 1.00 33.85 N
ATOM 20 C5 C A 880 66.144 117.151 60.479 1.00 34.24 C
ATOM 21 C6 C A 880 65.083 117.706 59.875 1.00 35.65 C
ATOM 22 P A A 881 59.442 121.009 58.196 1.00 35.38 P
ATOM 23 OP1 A A 881 59.335 120.210 56.950 1.00 35.78 O
ATOM 24 OP2 A A 881 58.869 122.366 58.252 1.00 32.06 O
ATOM 25 O5' A A 881 58.719 120.156 59.313 1.00 35.43 O
TER
ATOM 1 O3' C B 880 60.985 121.010 58.683 1.00 35.57 O
ATOM 2 P A B 881 59.442 121.009 58.196 1.00 35.38 P
ATOM 3 OP1 A B 881 59.335 120.210 56.950 1.00 35.78 O
ATOM 4 OP2 A B 881 58.869 122.366 58.252 1.00 32.06 O
ATOM 5 O5' A B 881 58.719 120.156 59.313 1.00 35.43 O
ATOM 6 C5' A B 881 58.753 120.555 60.674 1.00 35.25 C
ATOM 7 C4' A B 881 58.428 119.373 61.537 1.00 36.88 C
ATOM 8 O4' A B 881 57.048 118.987 61.319 1.00 39.08 O
ATOM 9 C3' A B 881 59.261 118.125 61.273 1.00 37.49 C
ATOM 10 O3' A B 881 59.363 117.420 62.498 1.00 37.72 O
ATOM 11 C2' A B 881 58.400 117.329 60.295 1.00 37.29 C
ATOM 12 O2' A B 881 58.596 115.946 60.473 1.00 36.41 O
ATOM 13 C1' A B 881 56.988 117.697 60.749 1.00 39.24 C
ATOM 14 N9 A B 881 56.030 117.758 59.651 1.00 41.42 N
ATOM 15 C8 A B 881 56.173 118.418 58.453 1.00 43.76 C
ATOM 16 N7 A B 881 55.141 118.301 57.656 1.00 44.02 N
ATOM 17 C5 A B 881 54.262 117.501 58.370 1.00 44.19 C
ATOM 18 C6 A B 881 52.998 116.997 58.058 1.00 43.95 C
ATOM 19 N6 A B 881 52.382 117.220 56.894 1.00 43.37 N
ATOM 20 N1 A B 881 52.380 116.238 58.984 1.00 44.14 N
ATOM 21 C2 A B 881 53.009 116.001 60.141 1.00 44.22 C
ATOM 22 N3 A B 881 54.209 116.412 60.551 1.00 44.54 N
ATOM 23 C4 A B 881 54.792 117.167 59.605 1.00 43.66 C
ATOM 24 P A B 882 60.583 117.720 63.503 1.00 37.81 P
ATOM 25 OP1 A B 882 59.991 117.708 64.857 1.00 37.68 O
ATOM 26 OP2 A B 882 61.390 118.896 63.067 1.00 36.42 O
ATOM 27 O5' A B 882 61.488 116.419 63.386 1.00 35.50 O
TER
Atoms:
C2: (64.928,119.374,61.578)
OP1: (64.556,116.234,57.005)
OP2: (63.182,116.429,54.863)
C4: (66.587,117.741,61.694)
O5': (63.167,118.169,56.573)
C3': (61.938,120.177,58.027)
C1': (63.206,119.345,59.826)
O4': (62.361,118.286,59.416)
C5': (61.873,117.847,57.094)
P: (64.035,117.044,55.889)
O2: (64.361,120.396,62.008)
C4': (61.572,118.720,58.278)
C2': (63.349,120.259,58.618)
O2': (63.754,121.542,59.021)
N1: (64.444,118.789,60.418)
N3: (65.998,118.824,62.205)
N4: (67.620,117.211,62.369)
C6: (65.083,117.706,59.875)
C5: (66.144,117.151,60.479)
O3': (60.985,121.010,58.683)
OP1: (64.556,116.234,57.005)
OP2: (63.182,116.429,54.863)
C4: (66.587,117.741,61.694)
O5': (63.167,118.169,56.573)
C3': (61.938,120.177,58.027)
C1': (63.206,119.345,59.826)
O4': (62.361,118.286,59.416)
C5': (61.873,117.847,57.094)
P: (64.035,117.044,55.889)
O2: (64.361,120.396,62.008)
C4': (61.572,118.720,58.278)
C2': (63.349,120.259,58.618)
O2': (63.754,121.542,59.021)
N1: (64.444,118.789,60.418)
N3: (65.998,118.824,62.205)
N4: (67.620,117.211,62.369)
C6: (65.083,117.706,59.875)
C5: (66.144,117.151,60.479)
O3': (60.985,121.010,58.683)
OP1: (59.335,120.210,56.950)
OP2: (58.869,122.366,58.252)
C3': (59.261,118.125,61.273)
C1': (56.988,117.697,60.749)
C5': (58.753,120.555,60.674)
O4': (57.048,118.987,61.319)
C8: (56.173,118.418,58.453)
O2': (58.596,115.946,60.473)
C6: (52.998,116.997,58.058)
C5: (54.262,117.501,58.370)
C4: (54.792,117.167,59.605)
P: (59.442,121.009,58.196)
C4': (58.428,119.373,61.537)
C2': (58.400,117.329,60.295)
C2: (53.009,116.001,60.141)
N1: (52.380,116.238,58.984)
N3: (54.209,116.412,60.551)
N6: (52.382,117.220,56.894)
N7: (55.141,118.301,57.656)
N9: (56.030,117.758,59.651)
O5': (58.719,120.156,59.313)
O3': (59.363,117.420,62.498)
OP2: (58.869,122.366,58.252)
C3': (59.261,118.125,61.273)
C1': (56.988,117.697,60.749)
C5': (58.753,120.555,60.674)
O4': (57.048,118.987,61.319)
C8: (56.173,118.418,58.453)
O2': (58.596,115.946,60.473)
C6: (52.998,116.997,58.058)
C5: (54.262,117.501,58.370)
C4: (54.792,117.167,59.605)
P: (59.442,121.009,58.196)
C4': (58.428,119.373,61.537)
C2': (58.400,117.329,60.295)
C2: (53.009,116.001,60.141)
N1: (52.380,116.238,58.984)
N3: (54.209,116.412,60.551)
N6: (52.382,117.220,56.894)
N7: (55.141,118.301,57.656)
N9: (56.030,117.758,59.651)
O5': (58.719,120.156,59.313)
O3': (59.363,117.420,62.498)
Image (generated by PyMOL):