ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01289:01286

Extra

PDB:
ATOM 1 O3' G A1288 21.129 114.356 77.035 1.00 34.87 O
ATOM 2 P A A1289 21.140 115.625 76.049 1.00 33.54 P
ATOM 3 OP1 A A1289 21.852 116.719 76.752 1.00 34.48 O
ATOM 4 OP2 A A1289 19.762 115.848 75.573 1.00 32.08 O
ATOM 5 O5' A A1289 22.027 115.151 74.814 1.00 32.03 O
ATOM 6 C5' A A1289 23.460 115.265 74.839 1.00 29.30 C
ATOM 7 C4' A A1289 24.041 114.636 73.605 1.00 28.92 C
ATOM 8 O4' A A1289 23.474 113.309 73.511 1.00 30.65 O
ATOM 9 C3' A A1289 23.682 115.279 72.271 1.00 28.69 C
ATOM 10 O3' A A1289 24.600 116.299 71.897 1.00 28.29 O
ATOM 11 C2' A A1289 23.849 114.113 71.308 1.00 30.79 C
ATOM 12 O2' A A1289 25.201 113.850 70.983 1.00 31.94 O
ATOM 13 C1' A A1289 23.334 112.948 72.149 1.00 31.32 C
ATOM 14 N9 A A1289 21.939 112.596 71.882 1.00 30.98 N
ATOM 15 C8 A A1289 20.802 113.311 72.151 1.00 29.57 C
ATOM 16 N7 A A1289 19.701 112.711 71.774 1.00 29.78 N
ATOM 17 C5 A A1289 20.143 111.517 71.220 1.00 30.76 C
ATOM 18 C6 A A1289 19.462 110.421 70.640 1.00 32.32 C
ATOM 19 N6 A A1289 18.135 110.357 70.498 1.00 34.20 N
ATOM 20 N1 A A1289 20.204 109.379 70.202 1.00 32.91 N
ATOM 21 C2 A A1289 21.534 109.446 70.327 1.00 33.23 C
ATOM 22 N3 A A1289 22.285 110.419 70.842 1.00 33.83 N
ATOM 23 C4 A A1289 21.518 111.434 71.280 1.00 31.48 C
ATOM 24 P G A1290 24.202 117.852 72.036 1.00 33.22 P
ATOM 25 OP1 G A1290 25.360 118.607 71.507 1.00 32.76 O
ATOM 26 OP2 G A1290 23.746 118.086 73.422 1.00 33.70 O
ATOM 27 O5' G A1290 22.929 118.121 71.102 1.00 34.77 O
TER

ATOM 1 O3' C B1285 7.813 113.397 75.526 1.00 35.92 O
ATOM 2 P G B1286 8.456 112.437 76.639 1.00 40.62 P
ATOM 3 OP1 G B1286 7.670 111.171 76.612 1.00 39.65 O
ATOM 4 OP2 G B1286 8.612 113.195 77.911 1.00 36.93 O
ATOM 5 O5' G B1286 9.906 112.104 76.080 1.00 38.59 O
ATOM 6 C5' G B1286 10.056 111.258 74.934 1.00 38.71 C
ATOM 7 C4' G B1286 11.499 111.196 74.504 1.00 38.36 C
ATOM 8 O4' G B1286 11.952 112.510 74.088 1.00 38.32 O
ATOM 9 C3' G B1286 12.515 110.830 75.569 1.00 36.97 C
ATOM 10 O3' G B1286 12.515 109.442 75.854 1.00 36.60 O
ATOM 11 C2' G B1286 13.813 111.274 74.910 1.00 35.42 C
ATOM 12 O2' G B1286 14.280 110.342 73.953 1.00 34.46 O
ATOM 13 C1' G B1286 13.363 112.566 74.217 1.00 36.20 C
ATOM 14 N9 G B1286 13.728 113.729 75.012 1.00 34.63 N
ATOM 15 C8 G B1286 12.945 114.452 75.879 1.00 34.88 C
ATOM 16 N7 G B1286 13.611 115.376 76.515 1.00 34.83 N
ATOM 17 C5 G B1286 14.905 115.265 76.018 1.00 35.49 C
ATOM 18 C6 G B1286 16.086 115.973 76.347 1.00 34.22 C
ATOM 19 O6 G B1286 16.247 116.860 77.187 1.00 36.09 O
ATOM 20 N1 G B1286 17.166 115.543 75.589 1.00 34.37 N
ATOM 21 C2 G B1286 17.127 114.546 74.652 1.00 35.18 C
ATOM 22 N2 G B1286 18.273 114.279 74.019 1.00 35.72 N
ATOM 23 N3 G B1286 16.046 113.862 74.355 1.00 36.30 N
ATOM 24 C4 G B1286 14.978 114.273 75.069 1.00 35.70 C
ATOM 25 P A B1287 12.379 108.952 77.375 1.00 36.82 P
ATOM 26 OP1 A B1287 12.336 107.471 77.345 1.00 34.49 O
ATOM 27 OP2 A B1287 11.277 109.716 78.012 1.00 36.17 O
ATOM 28 O5' A B1287 13.728 109.427 78.073 1.00 36.91 O
TER

Atoms:
OP1: (21.852,116.719,76.752)
OP2: (19.762,115.848,75.573)
C3': (23.682,115.279,72.271)
C1': (23.334,112.948,72.149)
C5': (23.460,115.265,74.839)
O4': (23.474,113.309,73.511)
C8: (20.802,113.311,72.151)
O2': (25.201,113.850,70.983)
C6: (19.462,110.421,70.640)
C5: (20.143,111.517,71.220)
C4: (21.518,111.434,71.280)
P: (21.140,115.625,76.049)
C4': (24.041,114.636,73.605)
C2': (23.849,114.113,71.308)
C2: (21.534,109.446,70.327)
N1: (20.204,109.379,70.202)
N3: (22.285,110.419,70.842)
N6: (18.135,110.357,70.498)
N7: (19.701,112.711,71.774)
N9: (21.939,112.596,71.882)
O5': (22.027,115.151,74.814)
O3': (24.600,116.299,71.897)
OP1: (7.670,111.171,76.612)
OP2: (8.612,113.195,77.911)
C3': (12.515,110.830,75.569)
C1': (13.363,112.566,74.217)
C5': (10.056,111.258,74.934)
O6: (16.247,116.860,77.187)
O4': (11.952,112.510,74.088)
C8: (12.945,114.452,75.879)
C2: (17.127,114.546,74.652)
C6: (16.086,115.973,76.347)
C5: (14.905,115.265,76.018)
C4: (14.978,114.273,75.069)
P: (8.456,112.437,76.639)
C4': (11.499,111.196,74.504)
C2': (13.813,111.274,74.910)
O2': (14.280,110.342,73.953)
N1: (17.166,115.543,75.589)
N2: (18.273,114.279,74.019)
N3: (16.046,113.862,74.355)
N7: (13.611,115.376,76.515)
N9: (13.728,113.729,75.012)
O5': (9.906,112.104,76.080)
O3': (12.515,109.442,75.854)
Image (generated by PyMOL):
PyMOL image
show in jmol