Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0880:0881
Extra
PDB:
ATOM 1 O3' G A 879 65.271 117.534 54.829 1.00 28.75 O
ATOM 2 P C A 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 3 OP1 C A 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 4 OP2 C A 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 5 O5' C A 880 63.307 117.904 56.387 1.00 26.33 O
ATOM 6 C5' C A 880 61.941 117.733 56.761 1.00 28.38 C
ATOM 7 C4' C A 880 61.584 118.697 57.860 1.00 29.17 C
ATOM 8 O4' C A 880 62.270 118.327 59.084 1.00 28.86 O
ATOM 9 C3' C A 880 61.956 120.144 57.590 1.00 28.40 C
ATOM 10 O3' C A 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 11 C2' C A 880 63.330 120.252 58.251 1.00 28.76 C
ATOM 12 O2' C A 880 63.656 121.565 58.655 1.00 30.73 O
ATOM 13 C1' C A 880 63.136 119.368 59.479 1.00 28.08 C
ATOM 14 N1 C A 880 64.352 118.754 60.042 1.00 26.81 N
ATOM 15 C2 C A 880 64.909 119.303 61.193 1.00 27.51 C
ATOM 16 O2 C A 880 64.434 120.359 61.645 1.00 30.28 O
ATOM 17 N3 C A 880 65.952 118.681 61.784 1.00 26.12 N
ATOM 18 C4 C A 880 66.452 117.569 61.249 1.00 26.94 C
ATOM 19 N4 C A 880 67.458 116.959 61.887 1.00 27.35 N
ATOM 20 C5 C A 880 65.941 117.023 60.041 1.00 26.95 C
ATOM 21 C6 C A 880 64.903 117.642 59.476 1.00 26.54 C
ATOM 22 P A A 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 23 OP1 A A 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 24 OP2 A A 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 25 O5' A A 881 58.714 120.116 58.878 1.00 28.73 O
TER
ATOM 1 O3' C B 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 2 P A B 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 3 OP1 A B 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 4 OP2 A B 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 5 O5' A B 881 58.714 120.116 58.878 1.00 28.73 O
ATOM 6 C5' A B 881 58.695 120.531 60.256 1.00 29.55 C
ATOM 7 C4' A B 881 58.362 119.356 61.149 1.00 28.58 C
ATOM 8 O4' A B 881 56.999 118.932 60.891 1.00 30.14 O
ATOM 9 C3' A B 881 59.229 118.121 60.950 1.00 26.72 C
ATOM 10 O3' A B 881 59.320 117.412 62.171 1.00 27.44 O
ATOM 11 C2' A B 881 58.438 117.318 59.931 1.00 26.40 C
ATOM 12 O2' A B 881 58.727 115.944 60.040 1.00 23.32 O
ATOM 13 C1' A B 881 56.997 117.626 60.344 1.00 29.40 C
ATOM 14 N9 A B 881 56.039 117.627 59.236 1.00 30.76 N
ATOM 15 C8 A B 881 56.187 118.208 58.004 1.00 31.55 C
ATOM 16 N7 A B 881 55.142 118.075 57.227 1.00 33.72 N
ATOM 17 C5 A B 881 54.245 117.352 57.996 1.00 33.30 C
ATOM 18 C6 A B 881 52.945 116.885 57.742 1.00 33.40 C
ATOM 19 N6 A B 881 52.285 117.110 56.602 1.00 32.58 N
ATOM 20 N1 A B 881 52.335 116.175 58.714 1.00 33.83 N
ATOM 21 C2 A B 881 52.989 115.964 59.859 1.00 33.62 C
ATOM 22 N3 A B 881 54.203 116.364 60.222 1.00 34.21 N
ATOM 23 C4 A B 881 54.787 117.060 59.233 1.00 32.74 C
ATOM 24 P A B 882 60.634 117.563 63.079 1.00 30.50 P
ATOM 25 OP1 A B 882 60.178 117.701 64.490 1.00 28.94 O
ATOM 26 OP2 A B 882 61.503 118.606 62.479 1.00 31.50 O
ATOM 27 O5' A B 882 61.392 116.176 62.930 1.00 27.32 O
TER
ATOM 2 P C A 880 64.050 116.788 55.544 1.00 28.83 P
ATOM 3 OP1 C A 880 64.598 115.777 56.477 1.00 28.97 O
ATOM 4 OP2 C A 880 63.142 116.375 54.448 1.00 28.82 O
ATOM 5 O5' C A 880 63.307 117.904 56.387 1.00 26.33 O
ATOM 6 C5' C A 880 61.941 117.733 56.761 1.00 28.38 C
ATOM 7 C4' C A 880 61.584 118.697 57.860 1.00 29.17 C
ATOM 8 O4' C A 880 62.270 118.327 59.084 1.00 28.86 O
ATOM 9 C3' C A 880 61.956 120.144 57.590 1.00 28.40 C
ATOM 10 O3' C A 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 11 C2' C A 880 63.330 120.252 58.251 1.00 28.76 C
ATOM 12 O2' C A 880 63.656 121.565 58.655 1.00 30.73 O
ATOM 13 C1' C A 880 63.136 119.368 59.479 1.00 28.08 C
ATOM 14 N1 C A 880 64.352 118.754 60.042 1.00 26.81 N
ATOM 15 C2 C A 880 64.909 119.303 61.193 1.00 27.51 C
ATOM 16 O2 C A 880 64.434 120.359 61.645 1.00 30.28 O
ATOM 17 N3 C A 880 65.952 118.681 61.784 1.00 26.12 N
ATOM 18 C4 C A 880 66.452 117.569 61.249 1.00 26.94 C
ATOM 19 N4 C A 880 67.458 116.959 61.887 1.00 27.35 N
ATOM 20 C5 C A 880 65.941 117.023 60.041 1.00 26.95 C
ATOM 21 C6 C A 880 64.903 117.642 59.476 1.00 26.54 C
ATOM 22 P A A 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 23 OP1 A A 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 24 OP2 A A 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 25 O5' A A 881 58.714 120.116 58.878 1.00 28.73 O
TER
ATOM 1 O3' C B 880 61.005 120.954 58.265 1.00 30.09 O
ATOM 2 P A B 881 59.476 120.967 57.776 1.00 29.57 P
ATOM 3 OP1 A B 881 59.372 120.233 56.491 1.00 29.74 O
ATOM 4 OP2 A B 881 59.006 122.370 57.865 1.00 29.31 O
ATOM 5 O5' A B 881 58.714 120.116 58.878 1.00 28.73 O
ATOM 6 C5' A B 881 58.695 120.531 60.256 1.00 29.55 C
ATOM 7 C4' A B 881 58.362 119.356 61.149 1.00 28.58 C
ATOM 8 O4' A B 881 56.999 118.932 60.891 1.00 30.14 O
ATOM 9 C3' A B 881 59.229 118.121 60.950 1.00 26.72 C
ATOM 10 O3' A B 881 59.320 117.412 62.171 1.00 27.44 O
ATOM 11 C2' A B 881 58.438 117.318 59.931 1.00 26.40 C
ATOM 12 O2' A B 881 58.727 115.944 60.040 1.00 23.32 O
ATOM 13 C1' A B 881 56.997 117.626 60.344 1.00 29.40 C
ATOM 14 N9 A B 881 56.039 117.627 59.236 1.00 30.76 N
ATOM 15 C8 A B 881 56.187 118.208 58.004 1.00 31.55 C
ATOM 16 N7 A B 881 55.142 118.075 57.227 1.00 33.72 N
ATOM 17 C5 A B 881 54.245 117.352 57.996 1.00 33.30 C
ATOM 18 C6 A B 881 52.945 116.885 57.742 1.00 33.40 C
ATOM 19 N6 A B 881 52.285 117.110 56.602 1.00 32.58 N
ATOM 20 N1 A B 881 52.335 116.175 58.714 1.00 33.83 N
ATOM 21 C2 A B 881 52.989 115.964 59.859 1.00 33.62 C
ATOM 22 N3 A B 881 54.203 116.364 60.222 1.00 34.21 N
ATOM 23 C4 A B 881 54.787 117.060 59.233 1.00 32.74 C
ATOM 24 P A B 882 60.634 117.563 63.079 1.00 30.50 P
ATOM 25 OP1 A B 882 60.178 117.701 64.490 1.00 28.94 O
ATOM 26 OP2 A B 882 61.503 118.606 62.479 1.00 31.50 O
ATOM 27 O5' A B 882 61.392 116.176 62.930 1.00 27.32 O
TER
Atoms:
C2: (64.909,119.303,61.193)
OP1: (64.598,115.777,56.477)
OP2: (63.142,116.375,54.448)
C4: (66.452,117.569,61.249)
O5': (63.307,117.904,56.387)
C3': (61.956,120.144,57.590)
C1': (63.136,119.368,59.479)
O4': (62.270,118.327,59.084)
C5': (61.941,117.733,56.761)
P: (64.050,116.788,55.544)
O2: (64.434,120.359,61.645)
C4': (61.584,118.697,57.860)
C2': (63.330,120.252,58.251)
O2': (63.656,121.565,58.655)
N1: (64.352,118.754,60.042)
N3: (65.952,118.681,61.784)
N4: (67.458,116.959,61.887)
C6: (64.903,117.642,59.476)
C5: (65.941,117.023,60.041)
O3': (61.005,120.954,58.265)
OP1: (64.598,115.777,56.477)
OP2: (63.142,116.375,54.448)
C4: (66.452,117.569,61.249)
O5': (63.307,117.904,56.387)
C3': (61.956,120.144,57.590)
C1': (63.136,119.368,59.479)
O4': (62.270,118.327,59.084)
C5': (61.941,117.733,56.761)
P: (64.050,116.788,55.544)
O2: (64.434,120.359,61.645)
C4': (61.584,118.697,57.860)
C2': (63.330,120.252,58.251)
O2': (63.656,121.565,58.655)
N1: (64.352,118.754,60.042)
N3: (65.952,118.681,61.784)
N4: (67.458,116.959,61.887)
C6: (64.903,117.642,59.476)
C5: (65.941,117.023,60.041)
O3': (61.005,120.954,58.265)
OP1: (59.372,120.233,56.491)
OP2: (59.006,122.370,57.865)
C3': (59.229,118.121,60.950)
C1': (56.997,117.626,60.344)
C5': (58.695,120.531,60.256)
O4': (56.999,118.932,60.891)
C8: (56.187,118.208,58.004)
O2': (58.727,115.944,60.040)
C6: (52.945,116.885,57.742)
C5: (54.245,117.352,57.996)
C4: (54.787,117.060,59.233)
P: (59.476,120.967,57.776)
C4': (58.362,119.356,61.149)
C2': (58.438,117.318,59.931)
C2: (52.989,115.964,59.859)
N1: (52.335,116.175,58.714)
N3: (54.203,116.364,60.222)
N6: (52.285,117.110,56.602)
N7: (55.142,118.075,57.227)
N9: (56.039,117.627,59.236)
O5': (58.714,120.116,58.878)
O3': (59.320,117.412,62.171)
OP2: (59.006,122.370,57.865)
C3': (59.229,118.121,60.950)
C1': (56.997,117.626,60.344)
C5': (58.695,120.531,60.256)
O4': (56.999,118.932,60.891)
C8: (56.187,118.208,58.004)
O2': (58.727,115.944,60.040)
C6: (52.945,116.885,57.742)
C5: (54.245,117.352,57.996)
C4: (54.787,117.060,59.233)
P: (59.476,120.967,57.776)
C4': (58.362,119.356,61.149)
C2': (58.438,117.318,59.931)
C2: (52.989,115.964,59.859)
N1: (52.335,116.175,58.714)
N3: (54.203,116.364,60.222)
N6: (52.285,117.110,56.602)
N7: (55.142,118.075,57.227)
N9: (56.039,117.627,59.236)
O5': (58.714,120.116,58.878)
O3': (59.320,117.412,62.171)
Image (generated by PyMOL):