Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0880:0881
Extra
PDB:
ATOM 1 O3' G A 879 65.436 117.847 55.083 1.00 36.83 O
ATOM 2 P C A 880 64.209 117.097 55.794 1.00 39.38 P
ATOM 3 OP1 C A 880 64.775 116.058 56.685 1.00 38.54 O
ATOM 4 OP2 C A 880 63.255 116.723 54.720 1.00 38.58 O
ATOM 5 O5' C A 880 63.492 118.195 56.694 1.00 39.22 O
ATOM 6 C5' C A 880 62.119 118.020 57.103 1.00 41.40 C
ATOM 7 C4' C A 880 61.751 119.025 58.173 1.00 42.29 C
ATOM 8 O4' C A 880 62.419 118.697 59.419 1.00 42.64 O
ATOM 9 C3' C A 880 62.107 120.473 57.872 1.00 41.46 C
ATOM 10 O3' C A 880 61.145 121.307 58.506 1.00 42.12 O
ATOM 11 C2' C A 880 63.473 120.612 58.540 1.00 42.35 C
ATOM 12 O2' C A 880 63.771 121.938 58.921 1.00 44.47 O
ATOM 13 C1' C A 880 63.288 119.748 59.785 1.00 42.25 C
ATOM 14 N1 C A 880 64.520 119.150 60.336 1.00 41.44 N
ATOM 15 C2 C A 880 65.100 119.717 61.472 1.00 42.04 C
ATOM 16 O2 C A 880 64.617 120.766 61.939 1.00 43.78 O
ATOM 17 N3 C A 880 66.170 119.115 62.035 1.00 39.94 N
ATOM 18 C4 C A 880 66.667 118.003 61.501 1.00 38.89 C
ATOM 19 N4 C A 880 67.687 117.419 62.117 1.00 38.81 N
ATOM 20 C5 C A 880 66.131 117.435 60.318 1.00 40.59 C
ATOM 21 C6 C A 880 65.071 118.035 59.770 1.00 41.67 C
ATOM 22 P A A 881 59.615 121.273 58.017 1.00 42.22 P
ATOM 23 OP1 A A 881 59.524 120.495 56.753 1.00 40.38 O
ATOM 24 OP2 A A 881 59.084 122.652 58.074 1.00 41.39 O
ATOM 25 O5' A A 881 58.877 120.429 59.139 1.00 41.26 O
TER
ATOM 1 O3' C B 880 61.145 121.307 58.506 1.00 42.12 O
ATOM 2 P A B 881 59.615 121.273 58.017 1.00 42.22 P
ATOM 3 OP1 A B 881 59.524 120.495 56.753 1.00 40.38 O
ATOM 4 OP2 A B 881 59.084 122.652 58.074 1.00 41.39 O
ATOM 5 O5' A B 881 58.877 120.429 59.139 1.00 41.26 O
ATOM 6 C5' A B 881 58.869 120.855 60.511 1.00 42.97 C
ATOM 7 C4' A B 881 58.530 119.684 61.410 1.00 42.60 C
ATOM 8 O4' A B 881 57.165 119.262 61.141 1.00 43.10 O
ATOM 9 C3' A B 881 59.395 118.446 61.202 1.00 40.69 C
ATOM 10 O3' A B 881 59.458 117.703 62.417 1.00 41.92 O
ATOM 11 C2' A B 881 58.606 117.684 60.145 1.00 39.93 C
ATOM 12 O2' A B 881 58.876 116.306 60.134 1.00 36.05 O
ATOM 13 C1' A B 881 57.166 117.962 60.580 1.00 43.20 C
ATOM 14 N9 A B 881 56.190 117.955 59.487 1.00 46.18 N
ATOM 15 C8 A B 881 56.327 118.515 58.241 1.00 47.16 C
ATOM 16 N7 A B 881 55.272 118.378 57.480 1.00 47.24 N
ATOM 17 C5 A B 881 54.379 117.675 58.272 1.00 46.34 C
ATOM 18 C6 A B 881 53.078 117.223 58.042 1.00 46.76 C
ATOM 19 N6 A B 881 52.415 117.429 56.901 1.00 46.32 N
ATOM 20 N1 A B 881 52.466 116.545 59.035 1.00 47.11 N
ATOM 21 C2 A B 881 53.128 116.348 60.175 1.00 46.41 C
ATOM 22 N3 A B 881 54.350 116.732 60.515 1.00 47.17 N
ATOM 23 C4 A B 881 54.932 117.399 59.507 1.00 46.51 C
ATOM 24 P A B 882 60.665 117.957 63.462 1.00 43.14 P
ATOM 25 OP1 A B 882 60.078 117.831 64.825 1.00 42.48 O
ATOM 26 OP2 A B 882 61.402 119.191 63.096 1.00 42.35 O
ATOM 27 O5' A B 882 61.637 116.707 63.282 1.00 39.77 O
TER
ATOM 2 P C A 880 64.209 117.097 55.794 1.00 39.38 P
ATOM 3 OP1 C A 880 64.775 116.058 56.685 1.00 38.54 O
ATOM 4 OP2 C A 880 63.255 116.723 54.720 1.00 38.58 O
ATOM 5 O5' C A 880 63.492 118.195 56.694 1.00 39.22 O
ATOM 6 C5' C A 880 62.119 118.020 57.103 1.00 41.40 C
ATOM 7 C4' C A 880 61.751 119.025 58.173 1.00 42.29 C
ATOM 8 O4' C A 880 62.419 118.697 59.419 1.00 42.64 O
ATOM 9 C3' C A 880 62.107 120.473 57.872 1.00 41.46 C
ATOM 10 O3' C A 880 61.145 121.307 58.506 1.00 42.12 O
ATOM 11 C2' C A 880 63.473 120.612 58.540 1.00 42.35 C
ATOM 12 O2' C A 880 63.771 121.938 58.921 1.00 44.47 O
ATOM 13 C1' C A 880 63.288 119.748 59.785 1.00 42.25 C
ATOM 14 N1 C A 880 64.520 119.150 60.336 1.00 41.44 N
ATOM 15 C2 C A 880 65.100 119.717 61.472 1.00 42.04 C
ATOM 16 O2 C A 880 64.617 120.766 61.939 1.00 43.78 O
ATOM 17 N3 C A 880 66.170 119.115 62.035 1.00 39.94 N
ATOM 18 C4 C A 880 66.667 118.003 61.501 1.00 38.89 C
ATOM 19 N4 C A 880 67.687 117.419 62.117 1.00 38.81 N
ATOM 20 C5 C A 880 66.131 117.435 60.318 1.00 40.59 C
ATOM 21 C6 C A 880 65.071 118.035 59.770 1.00 41.67 C
ATOM 22 P A A 881 59.615 121.273 58.017 1.00 42.22 P
ATOM 23 OP1 A A 881 59.524 120.495 56.753 1.00 40.38 O
ATOM 24 OP2 A A 881 59.084 122.652 58.074 1.00 41.39 O
ATOM 25 O5' A A 881 58.877 120.429 59.139 1.00 41.26 O
TER
ATOM 1 O3' C B 880 61.145 121.307 58.506 1.00 42.12 O
ATOM 2 P A B 881 59.615 121.273 58.017 1.00 42.22 P
ATOM 3 OP1 A B 881 59.524 120.495 56.753 1.00 40.38 O
ATOM 4 OP2 A B 881 59.084 122.652 58.074 1.00 41.39 O
ATOM 5 O5' A B 881 58.877 120.429 59.139 1.00 41.26 O
ATOM 6 C5' A B 881 58.869 120.855 60.511 1.00 42.97 C
ATOM 7 C4' A B 881 58.530 119.684 61.410 1.00 42.60 C
ATOM 8 O4' A B 881 57.165 119.262 61.141 1.00 43.10 O
ATOM 9 C3' A B 881 59.395 118.446 61.202 1.00 40.69 C
ATOM 10 O3' A B 881 59.458 117.703 62.417 1.00 41.92 O
ATOM 11 C2' A B 881 58.606 117.684 60.145 1.00 39.93 C
ATOM 12 O2' A B 881 58.876 116.306 60.134 1.00 36.05 O
ATOM 13 C1' A B 881 57.166 117.962 60.580 1.00 43.20 C
ATOM 14 N9 A B 881 56.190 117.955 59.487 1.00 46.18 N
ATOM 15 C8 A B 881 56.327 118.515 58.241 1.00 47.16 C
ATOM 16 N7 A B 881 55.272 118.378 57.480 1.00 47.24 N
ATOM 17 C5 A B 881 54.379 117.675 58.272 1.00 46.34 C
ATOM 18 C6 A B 881 53.078 117.223 58.042 1.00 46.76 C
ATOM 19 N6 A B 881 52.415 117.429 56.901 1.00 46.32 N
ATOM 20 N1 A B 881 52.466 116.545 59.035 1.00 47.11 N
ATOM 21 C2 A B 881 53.128 116.348 60.175 1.00 46.41 C
ATOM 22 N3 A B 881 54.350 116.732 60.515 1.00 47.17 N
ATOM 23 C4 A B 881 54.932 117.399 59.507 1.00 46.51 C
ATOM 24 P A B 882 60.665 117.957 63.462 1.00 43.14 P
ATOM 25 OP1 A B 882 60.078 117.831 64.825 1.00 42.48 O
ATOM 26 OP2 A B 882 61.402 119.191 63.096 1.00 42.35 O
ATOM 27 O5' A B 882 61.637 116.707 63.282 1.00 39.77 O
TER
Atoms:
C2: (65.100,119.717,61.472)
OP1: (64.775,116.058,56.685)
OP2: (63.255,116.723,54.720)
C4: (66.667,118.003,61.501)
O5': (63.492,118.195,56.694)
C3': (62.107,120.473,57.872)
C1': (63.288,119.748,59.785)
O4': (62.419,118.697,59.419)
C5': (62.119,118.020,57.103)
P: (64.209,117.097,55.794)
O2: (64.617,120.766,61.939)
C4': (61.751,119.025,58.173)
C2': (63.473,120.612,58.540)
O2': (63.771,121.938,58.921)
N1: (64.520,119.150,60.336)
N3: (66.170,119.115,62.035)
N4: (67.687,117.419,62.117)
C6: (65.071,118.035,59.770)
C5: (66.131,117.435,60.318)
O3': (61.145,121.307,58.506)
OP1: (64.775,116.058,56.685)
OP2: (63.255,116.723,54.720)
C4: (66.667,118.003,61.501)
O5': (63.492,118.195,56.694)
C3': (62.107,120.473,57.872)
C1': (63.288,119.748,59.785)
O4': (62.419,118.697,59.419)
C5': (62.119,118.020,57.103)
P: (64.209,117.097,55.794)
O2: (64.617,120.766,61.939)
C4': (61.751,119.025,58.173)
C2': (63.473,120.612,58.540)
O2': (63.771,121.938,58.921)
N1: (64.520,119.150,60.336)
N3: (66.170,119.115,62.035)
N4: (67.687,117.419,62.117)
C6: (65.071,118.035,59.770)
C5: (66.131,117.435,60.318)
O3': (61.145,121.307,58.506)
OP1: (59.524,120.495,56.753)
OP2: (59.084,122.652,58.074)
C3': (59.395,118.446,61.202)
C1': (57.166,117.962,60.580)
C5': (58.869,120.855,60.511)
O4': (57.165,119.262,61.141)
C8: (56.327,118.515,58.241)
O2': (58.876,116.306,60.134)
C6: (53.078,117.223,58.042)
C5: (54.379,117.675,58.272)
C4: (54.932,117.399,59.507)
P: (59.615,121.273,58.017)
C4': (58.530,119.684,61.410)
C2': (58.606,117.684,60.145)
C2: (53.128,116.348,60.175)
N1: (52.466,116.545,59.035)
N3: (54.350,116.732,60.515)
N6: (52.415,117.429,56.901)
N7: (55.272,118.378,57.480)
N9: (56.190,117.955,59.487)
O5': (58.877,120.429,59.139)
O3': (59.458,117.703,62.417)
OP2: (59.084,122.652,58.074)
C3': (59.395,118.446,61.202)
C1': (57.166,117.962,60.580)
C5': (58.869,120.855,60.511)
O4': (57.165,119.262,61.141)
C8: (56.327,118.515,58.241)
O2': (58.876,116.306,60.134)
C6: (53.078,117.223,58.042)
C5: (54.379,117.675,58.272)
C4: (54.932,117.399,59.507)
P: (59.615,121.273,58.017)
C4': (58.530,119.684,61.410)
C2': (58.606,117.684,60.145)
C2: (53.128,116.348,60.175)
N1: (52.466,116.545,59.035)
N3: (54.350,116.732,60.515)
N6: (52.415,117.429,56.901)
N7: (55.272,118.378,57.480)
N9: (56.190,117.955,59.487)
O5': (58.877,120.429,59.139)
O3': (59.458,117.703,62.417)
Image (generated by PyMOL):