Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0880:0881
Extra
PDB:
ATOM 1 O3' G A 879 65.242 117.673 54.724 1.00 33.19 O
ATOM 2 P C A 880 64.027 116.918 55.446 1.00 35.20 P
ATOM 3 OP1 C A 880 64.612 115.903 56.346 1.00 33.82 O
ATOM 4 OP2 C A 880 63.093 116.507 54.375 1.00 32.81 O
ATOM 5 O5' C A 880 63.312 118.035 56.326 1.00 32.17 O
ATOM 6 C5' C A 880 61.927 117.922 56.651 1.00 32.95 C
ATOM 7 C4' C A 880 61.562 118.886 57.752 1.00 34.99 C
ATOM 8 O4' C A 880 62.216 118.495 58.981 1.00 35.97 O
ATOM 9 C3' C A 880 61.919 120.348 57.534 1.00 35.08 C
ATOM 10 O3' C A 880 60.939 121.143 58.199 1.00 35.38 O
ATOM 11 C2' C A 880 63.266 120.466 58.247 1.00 35.49 C
ATOM 12 O2' C A 880 63.525 121.777 58.710 1.00 35.39 O
ATOM 13 C1' C A 880 63.053 119.538 59.438 1.00 34.93 C
ATOM 14 N1 C A 880 64.270 118.922 60.002 1.00 35.29 N
ATOM 15 C2 C A 880 64.879 119.513 61.107 1.00 35.97 C
ATOM 16 O2 C A 880 64.452 120.603 61.521 1.00 39.77 O
ATOM 17 N3 C A 880 65.922 118.888 61.696 1.00 34.64 N
ATOM 18 C4 C A 880 66.365 117.729 61.210 1.00 35.54 C
ATOM 19 N4 C A 880 67.361 117.115 61.856 1.00 36.87 N
ATOM 20 C5 C A 880 65.802 117.138 60.050 1.00 35.59 C
ATOM 21 C6 C A 880 64.772 117.764 59.480 1.00 35.92 C
ATOM 22 P A A 881 59.409 121.093 57.717 1.00 33.58 P
ATOM 23 OP1 A A 881 59.361 120.380 56.426 1.00 33.80 O
ATOM 24 OP2 A A 881 58.835 122.445 57.825 1.00 33.43 O
ATOM 25 O5' A A 881 58.708 120.184 58.813 1.00 33.58 O
TER
ATOM 1 O3' C B 880 60.939 121.143 58.199 1.00 35.38 O
ATOM 2 P A B 881 59.409 121.093 57.717 1.00 33.58 P
ATOM 3 OP1 A B 881 59.361 120.380 56.426 1.00 33.80 O
ATOM 4 OP2 A B 881 58.835 122.445 57.825 1.00 33.43 O
ATOM 5 O5' A B 881 58.708 120.184 58.813 1.00 33.58 O
ATOM 6 C5' A B 881 58.703 120.566 60.199 1.00 34.84 C
ATOM 7 C4' A B 881 58.329 119.383 61.064 1.00 36.56 C
ATOM 8 O4' A B 881 56.947 119.014 60.810 1.00 38.01 O
ATOM 9 C3' A B 881 59.152 118.121 60.835 1.00 37.40 C
ATOM 10 O3' A B 881 59.295 117.421 62.060 1.00 37.29 O
ATOM 11 C2' A B 881 58.303 117.338 59.841 1.00 37.11 C
ATOM 12 O2' A B 881 58.528 115.947 59.921 1.00 35.01 O
ATOM 13 C1' A B 881 56.886 117.696 60.291 1.00 38.82 C
ATOM 14 N9 A B 881 55.909 117.701 59.198 1.00 40.07 N
ATOM 15 C8 A B 881 56.029 118.323 57.978 1.00 41.15 C
ATOM 16 N7 A B 881 54.977 118.191 57.210 1.00 41.05 N
ATOM 17 C5 A B 881 54.106 117.424 57.967 1.00 40.05 C
ATOM 18 C6 A B 881 52.813 116.948 57.715 1.00 39.07 C
ATOM 19 N6 A B 881 52.143 117.189 56.586 1.00 36.64 N
ATOM 20 N1 A B 881 52.220 116.208 58.675 1.00 40.12 N
ATOM 21 C2 A B 881 52.891 115.972 59.810 1.00 40.67 C
ATOM 22 N3 A B 881 54.108 116.370 60.166 1.00 41.55 N
ATOM 23 C4 A B 881 54.670 117.104 59.190 1.00 40.87 C
ATOM 24 P A B 882 60.569 117.717 62.995 1.00 39.11 P
ATOM 25 OP1 A B 882 60.053 117.842 64.381 1.00 39.97 O
ATOM 26 OP2 A B 882 61.368 118.816 62.411 1.00 38.14 O
ATOM 27 O5' A B 882 61.450 116.399 62.906 1.00 35.48 O
TER
ATOM 2 P C A 880 64.027 116.918 55.446 1.00 35.20 P
ATOM 3 OP1 C A 880 64.612 115.903 56.346 1.00 33.82 O
ATOM 4 OP2 C A 880 63.093 116.507 54.375 1.00 32.81 O
ATOM 5 O5' C A 880 63.312 118.035 56.326 1.00 32.17 O
ATOM 6 C5' C A 880 61.927 117.922 56.651 1.00 32.95 C
ATOM 7 C4' C A 880 61.562 118.886 57.752 1.00 34.99 C
ATOM 8 O4' C A 880 62.216 118.495 58.981 1.00 35.97 O
ATOM 9 C3' C A 880 61.919 120.348 57.534 1.00 35.08 C
ATOM 10 O3' C A 880 60.939 121.143 58.199 1.00 35.38 O
ATOM 11 C2' C A 880 63.266 120.466 58.247 1.00 35.49 C
ATOM 12 O2' C A 880 63.525 121.777 58.710 1.00 35.39 O
ATOM 13 C1' C A 880 63.053 119.538 59.438 1.00 34.93 C
ATOM 14 N1 C A 880 64.270 118.922 60.002 1.00 35.29 N
ATOM 15 C2 C A 880 64.879 119.513 61.107 1.00 35.97 C
ATOM 16 O2 C A 880 64.452 120.603 61.521 1.00 39.77 O
ATOM 17 N3 C A 880 65.922 118.888 61.696 1.00 34.64 N
ATOM 18 C4 C A 880 66.365 117.729 61.210 1.00 35.54 C
ATOM 19 N4 C A 880 67.361 117.115 61.856 1.00 36.87 N
ATOM 20 C5 C A 880 65.802 117.138 60.050 1.00 35.59 C
ATOM 21 C6 C A 880 64.772 117.764 59.480 1.00 35.92 C
ATOM 22 P A A 881 59.409 121.093 57.717 1.00 33.58 P
ATOM 23 OP1 A A 881 59.361 120.380 56.426 1.00 33.80 O
ATOM 24 OP2 A A 881 58.835 122.445 57.825 1.00 33.43 O
ATOM 25 O5' A A 881 58.708 120.184 58.813 1.00 33.58 O
TER
ATOM 1 O3' C B 880 60.939 121.143 58.199 1.00 35.38 O
ATOM 2 P A B 881 59.409 121.093 57.717 1.00 33.58 P
ATOM 3 OP1 A B 881 59.361 120.380 56.426 1.00 33.80 O
ATOM 4 OP2 A B 881 58.835 122.445 57.825 1.00 33.43 O
ATOM 5 O5' A B 881 58.708 120.184 58.813 1.00 33.58 O
ATOM 6 C5' A B 881 58.703 120.566 60.199 1.00 34.84 C
ATOM 7 C4' A B 881 58.329 119.383 61.064 1.00 36.56 C
ATOM 8 O4' A B 881 56.947 119.014 60.810 1.00 38.01 O
ATOM 9 C3' A B 881 59.152 118.121 60.835 1.00 37.40 C
ATOM 10 O3' A B 881 59.295 117.421 62.060 1.00 37.29 O
ATOM 11 C2' A B 881 58.303 117.338 59.841 1.00 37.11 C
ATOM 12 O2' A B 881 58.528 115.947 59.921 1.00 35.01 O
ATOM 13 C1' A B 881 56.886 117.696 60.291 1.00 38.82 C
ATOM 14 N9 A B 881 55.909 117.701 59.198 1.00 40.07 N
ATOM 15 C8 A B 881 56.029 118.323 57.978 1.00 41.15 C
ATOM 16 N7 A B 881 54.977 118.191 57.210 1.00 41.05 N
ATOM 17 C5 A B 881 54.106 117.424 57.967 1.00 40.05 C
ATOM 18 C6 A B 881 52.813 116.948 57.715 1.00 39.07 C
ATOM 19 N6 A B 881 52.143 117.189 56.586 1.00 36.64 N
ATOM 20 N1 A B 881 52.220 116.208 58.675 1.00 40.12 N
ATOM 21 C2 A B 881 52.891 115.972 59.810 1.00 40.67 C
ATOM 22 N3 A B 881 54.108 116.370 60.166 1.00 41.55 N
ATOM 23 C4 A B 881 54.670 117.104 59.190 1.00 40.87 C
ATOM 24 P A B 882 60.569 117.717 62.995 1.00 39.11 P
ATOM 25 OP1 A B 882 60.053 117.842 64.381 1.00 39.97 O
ATOM 26 OP2 A B 882 61.368 118.816 62.411 1.00 38.14 O
ATOM 27 O5' A B 882 61.450 116.399 62.906 1.00 35.48 O
TER
Atoms:
C2: (64.879,119.513,61.107)
OP1: (64.612,115.903,56.346)
OP2: (63.093,116.507,54.375)
C4: (66.365,117.729,61.210)
O5': (63.312,118.035,56.326)
C3': (61.919,120.348,57.534)
C1': (63.053,119.538,59.438)
O4': (62.216,118.495,58.981)
C5': (61.927,117.922,56.651)
P: (64.027,116.918,55.446)
O2: (64.452,120.603,61.521)
C4': (61.562,118.886,57.752)
C2': (63.266,120.466,58.247)
O2': (63.525,121.777,58.710)
N1: (64.270,118.922,60.002)
N3: (65.922,118.888,61.696)
N4: (67.361,117.115,61.856)
C6: (64.772,117.764,59.480)
C5: (65.802,117.138,60.050)
O3': (60.939,121.143,58.199)
OP1: (64.612,115.903,56.346)
OP2: (63.093,116.507,54.375)
C4: (66.365,117.729,61.210)
O5': (63.312,118.035,56.326)
C3': (61.919,120.348,57.534)
C1': (63.053,119.538,59.438)
O4': (62.216,118.495,58.981)
C5': (61.927,117.922,56.651)
P: (64.027,116.918,55.446)
O2: (64.452,120.603,61.521)
C4': (61.562,118.886,57.752)
C2': (63.266,120.466,58.247)
O2': (63.525,121.777,58.710)
N1: (64.270,118.922,60.002)
N3: (65.922,118.888,61.696)
N4: (67.361,117.115,61.856)
C6: (64.772,117.764,59.480)
C5: (65.802,117.138,60.050)
O3': (60.939,121.143,58.199)
OP1: (59.361,120.380,56.426)
OP2: (58.835,122.445,57.825)
C3': (59.152,118.121,60.835)
C1': (56.886,117.696,60.291)
C5': (58.703,120.566,60.199)
O4': (56.947,119.014,60.810)
C8: (56.029,118.323,57.978)
O2': (58.528,115.947,59.921)
C6: (52.813,116.948,57.715)
C5: (54.106,117.424,57.967)
C4: (54.670,117.104,59.190)
P: (59.409,121.093,57.717)
C4': (58.329,119.383,61.064)
C2': (58.303,117.338,59.841)
C2: (52.891,115.972,59.810)
N1: (52.220,116.208,58.675)
N3: (54.108,116.370,60.166)
N6: (52.143,117.189,56.586)
N7: (54.977,118.191,57.210)
N9: (55.909,117.701,59.198)
O5': (58.708,120.184,58.813)
O3': (59.295,117.421,62.060)
OP2: (58.835,122.445,57.825)
C3': (59.152,118.121,60.835)
C1': (56.886,117.696,60.291)
C5': (58.703,120.566,60.199)
O4': (56.947,119.014,60.810)
C8: (56.029,118.323,57.978)
O2': (58.528,115.947,59.921)
C6: (52.813,116.948,57.715)
C5: (54.106,117.424,57.967)
C4: (54.670,117.104,59.190)
P: (59.409,121.093,57.717)
C4': (58.329,119.383,61.064)
C2': (58.303,117.338,59.841)
C2: (52.891,115.972,59.810)
N1: (52.220,116.208,58.675)
N3: (54.108,116.370,60.166)
N6: (52.143,117.189,56.586)
N7: (54.977,118.191,57.210)
N9: (55.909,117.701,59.198)
O5': (58.708,120.184,58.813)
O3': (59.295,117.421,62.060)
Image (generated by PyMOL):