Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0880:0881
Extra
PDB:
ATOM 1 O3' G A 879 65.130 117.504 54.813 1.00 23.73 O
ATOM 2 P C A 880 63.949 116.687 55.524 1.00 23.72 P
ATOM 3 OP1 C A 880 64.568 115.772 56.505 1.00 22.40 O
ATOM 4 OP2 C A 880 63.104 116.140 54.436 1.00 22.06 O
ATOM 5 O5' C A 880 63.138 117.796 56.326 1.00 21.54 O
ATOM 6 C5' C A 880 61.804 117.554 56.780 1.00 25.01 C
ATOM 7 C4' C A 880 61.439 118.527 57.876 1.00 27.83 C
ATOM 8 O4' C A 880 62.144 118.186 59.095 1.00 29.08 O
ATOM 9 C3' C A 880 61.749 119.993 57.607 1.00 28.28 C
ATOM 10 O3' C A 880 60.767 120.789 58.280 1.00 27.84 O
ATOM 11 C2' C A 880 63.129 120.144 58.253 1.00 29.09 C
ATOM 12 O2' C A 880 63.432 121.470 58.631 1.00 31.13 O
ATOM 13 C1' C A 880 62.973 119.261 59.488 1.00 28.84 C
ATOM 14 N1 C A 880 64.206 118.690 60.071 1.00 28.65 N
ATOM 15 C2 C A 880 64.734 119.253 61.241 1.00 30.47 C
ATOM 16 O2 C A 880 64.220 120.290 61.703 1.00 33.43 O
ATOM 17 N3 C A 880 65.794 118.657 61.839 1.00 29.24 N
ATOM 18 C4 C A 880 66.331 117.560 61.305 1.00 28.20 C
ATOM 19 N4 C A 880 67.343 116.975 61.957 1.00 28.86 N
ATOM 20 C5 C A 880 65.852 117.004 60.090 1.00 27.70 C
ATOM 21 C6 C A 880 64.803 117.596 59.510 1.00 28.59 C
ATOM 22 P A A 881 59.251 120.832 57.733 1.00 27.13 P
ATOM 23 OP1 A A 881 59.178 120.059 56.473 1.00 26.95 O
ATOM 24 OP2 A A 881 58.778 122.232 57.759 1.00 26.91 O
ATOM 25 O5' A A 881 58.419 120.039 58.833 1.00 27.28 O
TER
ATOM 1 O3' C B 880 60.767 120.789 58.280 1.00 27.84 O
ATOM 2 P A B 881 59.251 120.832 57.733 1.00 27.13 P
ATOM 3 OP1 A B 881 59.178 120.059 56.473 1.00 26.95 O
ATOM 4 OP2 A B 881 58.778 122.232 57.759 1.00 26.91 O
ATOM 5 O5' A B 881 58.419 120.039 58.833 1.00 27.28 O
ATOM 6 C5' A B 881 58.466 120.421 60.226 1.00 27.56 C
ATOM 7 C4' A B 881 58.169 119.227 61.117 1.00 26.93 C
ATOM 8 O4' A B 881 56.799 118.789 60.917 1.00 27.02 O
ATOM 9 C3' A B 881 59.035 117.995 60.892 1.00 26.37 C
ATOM 10 O3' A B 881 59.157 117.274 62.105 1.00 26.87 O
ATOM 11 C2' A B 881 58.222 117.205 59.874 1.00 26.27 C
ATOM 12 O2' A B 881 58.502 115.825 59.914 1.00 19.98 O
ATOM 13 C1' A B 881 56.786 117.510 60.311 1.00 27.29 C
ATOM 14 N9 A B 881 55.843 117.565 59.193 1.00 29.43 N
ATOM 15 C8 A B 881 56.020 118.170 57.971 1.00 30.13 C
ATOM 16 N7 A B 881 54.985 118.062 57.171 1.00 31.69 N
ATOM 17 C5 A B 881 54.062 117.337 57.915 1.00 31.17 C
ATOM 18 C6 A B 881 52.754 116.894 57.635 1.00 29.60 C
ATOM 19 N6 A B 881 52.116 117.136 56.490 1.00 28.70 N
ATOM 20 N1 A B 881 52.114 116.188 58.587 1.00 30.26 N
ATOM 21 C2 A B 881 52.744 115.953 59.742 1.00 31.94 C
ATOM 22 N3 A B 881 53.961 116.322 60.131 1.00 32.50 N
ATOM 23 C4 A B 881 54.578 117.020 59.160 1.00 31.42 C
ATOM 24 P A B 882 60.418 117.537 63.062 1.00 28.44 P
ATOM 25 OP1 A B 882 59.904 117.610 64.457 1.00 28.47 O
ATOM 26 OP2 A B 882 61.211 118.659 62.515 1.00 29.76 O
ATOM 27 O5' A B 882 61.294 116.216 62.948 1.00 26.04 O
TER
ATOM 2 P C A 880 63.949 116.687 55.524 1.00 23.72 P
ATOM 3 OP1 C A 880 64.568 115.772 56.505 1.00 22.40 O
ATOM 4 OP2 C A 880 63.104 116.140 54.436 1.00 22.06 O
ATOM 5 O5' C A 880 63.138 117.796 56.326 1.00 21.54 O
ATOM 6 C5' C A 880 61.804 117.554 56.780 1.00 25.01 C
ATOM 7 C4' C A 880 61.439 118.527 57.876 1.00 27.83 C
ATOM 8 O4' C A 880 62.144 118.186 59.095 1.00 29.08 O
ATOM 9 C3' C A 880 61.749 119.993 57.607 1.00 28.28 C
ATOM 10 O3' C A 880 60.767 120.789 58.280 1.00 27.84 O
ATOM 11 C2' C A 880 63.129 120.144 58.253 1.00 29.09 C
ATOM 12 O2' C A 880 63.432 121.470 58.631 1.00 31.13 O
ATOM 13 C1' C A 880 62.973 119.261 59.488 1.00 28.84 C
ATOM 14 N1 C A 880 64.206 118.690 60.071 1.00 28.65 N
ATOM 15 C2 C A 880 64.734 119.253 61.241 1.00 30.47 C
ATOM 16 O2 C A 880 64.220 120.290 61.703 1.00 33.43 O
ATOM 17 N3 C A 880 65.794 118.657 61.839 1.00 29.24 N
ATOM 18 C4 C A 880 66.331 117.560 61.305 1.00 28.20 C
ATOM 19 N4 C A 880 67.343 116.975 61.957 1.00 28.86 N
ATOM 20 C5 C A 880 65.852 117.004 60.090 1.00 27.70 C
ATOM 21 C6 C A 880 64.803 117.596 59.510 1.00 28.59 C
ATOM 22 P A A 881 59.251 120.832 57.733 1.00 27.13 P
ATOM 23 OP1 A A 881 59.178 120.059 56.473 1.00 26.95 O
ATOM 24 OP2 A A 881 58.778 122.232 57.759 1.00 26.91 O
ATOM 25 O5' A A 881 58.419 120.039 58.833 1.00 27.28 O
TER
ATOM 1 O3' C B 880 60.767 120.789 58.280 1.00 27.84 O
ATOM 2 P A B 881 59.251 120.832 57.733 1.00 27.13 P
ATOM 3 OP1 A B 881 59.178 120.059 56.473 1.00 26.95 O
ATOM 4 OP2 A B 881 58.778 122.232 57.759 1.00 26.91 O
ATOM 5 O5' A B 881 58.419 120.039 58.833 1.00 27.28 O
ATOM 6 C5' A B 881 58.466 120.421 60.226 1.00 27.56 C
ATOM 7 C4' A B 881 58.169 119.227 61.117 1.00 26.93 C
ATOM 8 O4' A B 881 56.799 118.789 60.917 1.00 27.02 O
ATOM 9 C3' A B 881 59.035 117.995 60.892 1.00 26.37 C
ATOM 10 O3' A B 881 59.157 117.274 62.105 1.00 26.87 O
ATOM 11 C2' A B 881 58.222 117.205 59.874 1.00 26.27 C
ATOM 12 O2' A B 881 58.502 115.825 59.914 1.00 19.98 O
ATOM 13 C1' A B 881 56.786 117.510 60.311 1.00 27.29 C
ATOM 14 N9 A B 881 55.843 117.565 59.193 1.00 29.43 N
ATOM 15 C8 A B 881 56.020 118.170 57.971 1.00 30.13 C
ATOM 16 N7 A B 881 54.985 118.062 57.171 1.00 31.69 N
ATOM 17 C5 A B 881 54.062 117.337 57.915 1.00 31.17 C
ATOM 18 C6 A B 881 52.754 116.894 57.635 1.00 29.60 C
ATOM 19 N6 A B 881 52.116 117.136 56.490 1.00 28.70 N
ATOM 20 N1 A B 881 52.114 116.188 58.587 1.00 30.26 N
ATOM 21 C2 A B 881 52.744 115.953 59.742 1.00 31.94 C
ATOM 22 N3 A B 881 53.961 116.322 60.131 1.00 32.50 N
ATOM 23 C4 A B 881 54.578 117.020 59.160 1.00 31.42 C
ATOM 24 P A B 882 60.418 117.537 63.062 1.00 28.44 P
ATOM 25 OP1 A B 882 59.904 117.610 64.457 1.00 28.47 O
ATOM 26 OP2 A B 882 61.211 118.659 62.515 1.00 29.76 O
ATOM 27 O5' A B 882 61.294 116.216 62.948 1.00 26.04 O
TER
Atoms:
C2: (64.734,119.253,61.241)
OP1: (64.568,115.772,56.505)
OP2: (63.104,116.140,54.436)
C4: (66.331,117.560,61.305)
O5': (63.138,117.796,56.326)
C3': (61.749,119.993,57.607)
C1': (62.973,119.261,59.488)
O4': (62.144,118.186,59.095)
C5': (61.804,117.554,56.780)
P: (63.949,116.687,55.524)
O2: (64.220,120.290,61.703)
C4': (61.439,118.527,57.876)
C2': (63.129,120.144,58.253)
O2': (63.432,121.470,58.631)
N1: (64.206,118.690,60.071)
N3: (65.794,118.657,61.839)
N4: (67.343,116.975,61.957)
C6: (64.803,117.596,59.510)
C5: (65.852,117.004,60.090)
O3': (60.767,120.789,58.280)
OP1: (64.568,115.772,56.505)
OP2: (63.104,116.140,54.436)
C4: (66.331,117.560,61.305)
O5': (63.138,117.796,56.326)
C3': (61.749,119.993,57.607)
C1': (62.973,119.261,59.488)
O4': (62.144,118.186,59.095)
C5': (61.804,117.554,56.780)
P: (63.949,116.687,55.524)
O2: (64.220,120.290,61.703)
C4': (61.439,118.527,57.876)
C2': (63.129,120.144,58.253)
O2': (63.432,121.470,58.631)
N1: (64.206,118.690,60.071)
N3: (65.794,118.657,61.839)
N4: (67.343,116.975,61.957)
C6: (64.803,117.596,59.510)
C5: (65.852,117.004,60.090)
O3': (60.767,120.789,58.280)
OP1: (59.178,120.059,56.473)
OP2: (58.778,122.232,57.759)
C3': (59.035,117.995,60.892)
C1': (56.786,117.510,60.311)
C5': (58.466,120.421,60.226)
O4': (56.799,118.789,60.917)
C8: (56.020,118.170,57.971)
O2': (58.502,115.825,59.914)
C6: (52.754,116.894,57.635)
C5: (54.062,117.337,57.915)
C4: (54.578,117.020,59.160)
P: (59.251,120.832,57.733)
C4': (58.169,119.227,61.117)
C2': (58.222,117.205,59.874)
C2: (52.744,115.953,59.742)
N1: (52.114,116.188,58.587)
N3: (53.961,116.322,60.131)
N6: (52.116,117.136,56.490)
N7: (54.985,118.062,57.171)
N9: (55.843,117.565,59.193)
O5': (58.419,120.039,58.833)
O3': (59.157,117.274,62.105)
OP2: (58.778,122.232,57.759)
C3': (59.035,117.995,60.892)
C1': (56.786,117.510,60.311)
C5': (58.466,120.421,60.226)
O4': (56.799,118.789,60.917)
C8: (56.020,118.170,57.971)
O2': (58.502,115.825,59.914)
C6: (52.754,116.894,57.635)
C5: (54.062,117.337,57.915)
C4: (54.578,117.020,59.160)
P: (59.251,120.832,57.733)
C4': (58.169,119.227,61.117)
C2': (58.222,117.205,59.874)
C2: (52.744,115.953,59.742)
N1: (52.114,116.188,58.587)
N3: (53.961,116.322,60.131)
N6: (52.116,117.136,56.490)
N7: (54.985,118.062,57.171)
N9: (55.843,117.565,59.193)
O5': (58.419,120.039,58.833)
O3': (59.157,117.274,62.105)
Image (generated by PyMOL):