ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:5882:5883

Extra

PDB:
ATOM 1 O3' C A 881 136.079 -18.194 201.816 1.00 39.62 O
ATOM 2 P U A 882 135.330 -18.259 203.222 1.00 42.87 P
ATOM 3 OP1 U A 882 136.339 -18.582 204.242 1.00 42.57 O
ATOM 4 OP2 U A 882 134.186 -19.185 203.043 1.00 43.14 O
ATOM 5 O5' U A 882 134.796 -16.788 203.443 1.00 42.62 O
ATOM 6 C5' U A 882 133.678 -16.548 204.275 1.00 42.43 C
ATOM 7 C4' U A 882 133.550 -15.092 204.611 1.00 42.14 C
ATOM 8 O4' U A 882 134.542 -14.760 205.616 1.00 41.76 O
ATOM 9 C3' U A 882 133.799 -14.134 203.448 1.00 42.32 C
ATOM 10 O3' U A 882 133.086 -12.921 203.659 1.00 42.16 O
ATOM 11 C2' U A 882 135.279 -13.844 203.582 1.00 42.14 C
ATOM 12 O2' U A 882 135.675 -12.638 202.994 1.00 42.13 O
ATOM 13 C1' U A 882 135.445 -13.805 205.100 1.00 41.71 C
ATOM 14 N1 U A 882 136.765 -14.159 205.538 1.00 41.56 N
ATOM 15 C2 U A 882 137.554 -13.210 206.114 1.00 41.24 C
ATOM 16 O2 U A 882 137.190 -12.079 206.312 1.00 41.06 O
ATOM 17 N3 U A 882 138.822 -13.602 206.463 1.00 41.13 N
ATOM 18 C4 U A 882 139.334 -14.885 206.277 1.00 41.32 C
ATOM 19 O4 U A 882 140.485 -15.170 206.647 1.00 41.21 O
ATOM 20 C5 U A 882 138.404 -15.801 205.660 1.00 41.66 C
ATOM 21 C6 U A 882 137.177 -15.413 205.304 1.00 41.77 C
ATOM 22 P A A 883 131.491 -12.875 203.581 1.00 39.03 P
ATOM 23 OP1 A A 883 131.037 -14.166 203.025 1.00 39.39 O
ATOM 24 OP2 A A 883 131.121 -11.638 202.895 1.00 39.10 O
ATOM 25 O5' A A 883 131.073 -12.772 205.085 1.00 38.64 O
TER

ATOM 1 O3' U B 882 133.086 -12.921 203.659 1.00 42.16 O
ATOM 2 P A B 883 131.491 -12.875 203.581 1.00 39.03 P
ATOM 3 OP1 A B 883 131.037 -14.166 203.025 1.00 39.39 O
ATOM 4 OP2 A B 883 131.121 -11.638 202.895 1.00 39.10 O
ATOM 5 O5' A B 883 131.073 -12.772 205.085 1.00 38.64 O
ATOM 6 C5' A B 883 131.458 -11.659 205.858 1.00 38.27 C
ATOM 7 C4' A B 883 131.293 -11.941 207.320 1.00 37.93 C
ATOM 8 O4' A B 883 129.886 -12.044 207.615 1.00 37.99 O
ATOM 9 C3' A B 883 131.923 -13.234 207.788 1.00 37.92 C
ATOM 10 O3' A B 883 132.405 -13.074 209.115 1.00 37.53 O
ATOM 11 C2' A B 883 130.742 -14.196 207.795 1.00 38.14 C
ATOM 12 O2' A B 883 130.871 -15.314 208.676 1.00 38.06 O
ATOM 13 C1' A B 883 129.608 -13.272 208.203 1.00 38.02 C
ATOM 14 N9 A B 883 128.328 -13.709 207.706 1.00 38.32 N
ATOM 15 C8 A B 883 128.090 -14.270 206.476 1.00 38.73 C
ATOM 16 N7 A B 883 126.860 -14.642 206.301 1.00 38.95 N
ATOM 17 C5 A B 883 126.261 -14.288 207.507 1.00 38.65 C
ATOM 18 C6 A B 883 124.934 -14.425 207.947 1.00 38.70 C
ATOM 19 N6 A B 883 124.007 -14.969 207.138 1.00 39.09 N
ATOM 20 N1 A B 883 124.591 -13.974 209.167 1.00 38.38 N
ATOM 21 C2 A B 883 125.612 -13.461 209.894 1.00 38.02 C
ATOM 22 N3 A B 883 126.935 -13.288 209.634 1.00 37.92 N
ATOM 23 C4 A B 883 127.163 -13.727 208.383 1.00 38.27 C
ATOM 24 P G B 884 133.909 -12.596 209.383 1.00 36.89 P
ATOM 25 OP1 G B 884 133.845 -11.788 210.474 1.00 36.53 O
ATOM 26 OP2 G B 884 134.430 -12.043 208.139 1.00 37.09 O
ATOM 27 O5' G B 884 134.669 -13.926 209.767 1.00 36.91 O
TER

Atoms:
C4: (139.334,-14.885,206.277)
N3: (138.822,-13.602,206.463)
OP1: (136.339,-18.582,204.242)
OP2: (134.186,-19.185,203.043)
C2: (137.554,-13.210,206.114)
C1': (135.445,-13.805,205.100)
C3': (133.799,-14.134,203.448)
O5': (134.796,-16.788,203.443)
O4': (134.542,-14.760,205.616)
C5': (133.678,-16.548,204.275)
P: (135.330,-18.259,203.222)
C4': (133.550,-15.092,204.611)
C2': (135.279,-13.844,203.582)
O2': (135.675,-12.638,202.994)
N1: (136.765,-14.159,205.538)
O4: (140.485,-15.170,206.647)
O2: (137.190,-12.079,206.312)
C6: (137.177,-15.413,205.304)
C5: (138.404,-15.801,205.660)
O3': (133.086,-12.921,203.659)
OP1: (131.037,-14.166,203.025)
OP2: (131.121,-11.638,202.895)
C3': (131.923,-13.234,207.788)
C1': (129.608,-13.272,208.203)
C5': (131.458,-11.659,205.858)
O4': (129.886,-12.044,207.615)
C8: (128.090,-14.270,206.476)
O2': (130.871,-15.314,208.676)
C6: (124.934,-14.425,207.947)
C5: (126.261,-14.288,207.507)
C4: (127.163,-13.727,208.383)
P: (131.491,-12.875,203.581)
C4': (131.293,-11.941,207.320)
C2': (130.742,-14.196,207.795)
C2: (125.612,-13.461,209.894)
N1: (124.591,-13.974,209.167)
N3: (126.935,-13.288,209.634)
N6: (124.007,-14.969,207.138)
N7: (126.860,-14.642,206.301)
N9: (128.328,-13.709,207.706)
O5': (131.073,-12.772,205.085)
O3': (132.405,-13.074,209.115)
Image (generated by PyMOL):
PyMOL image
show in jmol