ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0423:0178

Extra

PDB:
ATOM 1 O3' U A 422 66.152 114.885 15.855 1.00 44.25 O
ATOM 2 P A A 423 65.246 114.641 17.154 1.00 43.99 P
ATOM 3 OP1 A A 423 65.619 115.650 18.171 1.00 46.35 O
ATOM 4 OP2 A A 423 65.307 113.200 17.490 1.00 44.25 O
ATOM 5 O5' A A 423 63.769 114.977 16.679 1.00 44.43 O
ATOM 6 C5' A A 423 63.478 116.137 15.884 1.00 41.99 C
ATOM 7 C4' A A 423 62.191 115.913 15.137 1.00 43.90 C
ATOM 8 O4' A A 423 62.392 114.829 14.195 1.00 44.68 O
ATOM 9 C3' A A 423 61.045 115.443 16.020 1.00 45.27 C
ATOM 10 O3' A A 423 60.335 116.544 16.570 1.00 47.00 O
ATOM 11 C2' A A 423 60.188 114.634 15.062 1.00 44.56 C
ATOM 12 O2' A A 423 59.391 115.471 14.258 1.00 48.28 O
ATOM 13 C1' A A 423 61.254 113.988 14.179 1.00 42.93 C
ATOM 14 N9 A A 423 61.685 112.645 14.565 1.00 42.30 N
ATOM 15 C8 A A 423 62.882 112.285 15.135 1.00 42.25 C
ATOM 16 N7 A A 423 63.035 110.992 15.274 1.00 42.34 N
ATOM 17 C5 A A 423 61.849 110.463 14.784 1.00 41.43 C
ATOM 18 C6 A A 423 61.397 109.144 14.633 1.00 40.25 C
ATOM 19 N6 A A 423 62.121 108.071 14.950 1.00 40.35 N
ATOM 20 N1 A A 423 60.163 108.960 14.128 1.00 42.49 N
ATOM 21 C2 A A 423 59.442 110.037 13.785 1.00 42.66 C
ATOM 22 N3 A A 423 59.762 111.323 13.861 1.00 41.67 N
ATOM 23 C4 A A 423 60.995 111.471 14.373 1.00 41.84 C
ATOM 24 P A A 424 59.621 116.391 17.996 1.00 48.06 P
ATOM 25 OP1 A A 424 58.832 117.621 18.250 1.00 50.12 O
ATOM 26 OP2 A A 424 60.653 115.968 18.969 1.00 48.37 O
ATOM 27 O5' A A 424 58.613 115.172 17.788 1.00 49.08 O
TER

ATOM 1 O3' A B 177 71.462 106.957 24.467 1.00 40.29 O
ATOM 2 P G B 178 72.518 106.631 23.314 1.00 40.07 P
ATOM 3 OP1 G B 178 73.238 105.403 23.742 1.00 42.13 O
ATOM 4 OP2 G B 178 73.293 107.859 23.027 1.00 43.09 O
ATOM 5 O5' G B 178 71.599 106.291 22.055 1.00 41.22 O
ATOM 6 C5' G B 178 70.874 105.049 21.984 1.00 38.77 C
ATOM 7 C4' G B 178 69.915 105.059 20.820 1.00 39.31 C
ATOM 8 O4' G B 178 68.932 106.105 21.008 1.00 39.42 O
ATOM 9 C3' G B 178 70.513 105.336 19.447 1.00 40.67 C
ATOM 10 O3' G B 178 71.051 104.131 18.901 1.00 42.81 O
ATOM 11 C2' G B 178 69.297 105.833 18.671 1.00 40.68 C
ATOM 12 O2' G B 178 68.445 104.783 18.257 1.00 42.16 O
ATOM 13 C1' G B 178 68.553 106.631 19.746 1.00 40.63 C
ATOM 14 N9 G B 178 68.822 108.067 19.744 1.00 41.97 N
ATOM 15 C8 G B 178 69.864 108.721 20.359 1.00 40.87 C
ATOM 16 N7 G B 178 69.805 110.018 20.219 1.00 41.08 N
ATOM 17 C5 G B 178 68.666 110.230 19.457 1.00 41.64 C
ATOM 18 C6 G B 178 68.088 111.435 18.986 1.00 44.05 C
ATOM 19 O6 G B 178 68.482 112.594 19.153 1.00 43.38 O
ATOM 20 N1 G B 178 66.930 111.194 18.249 1.00 43.05 N
ATOM 21 C2 G B 178 66.403 109.954 17.990 1.00 42.81 C
ATOM 22 N2 G B 178 65.270 109.920 17.264 1.00 42.77 N
ATOM 23 N3 G B 178 66.942 108.826 18.415 1.00 43.48 N
ATOM 24 C4 G B 178 68.057 109.036 19.142 1.00 41.32 C
ATOM 25 P A B 179 72.449 104.150 18.109 1.00 42.61 P
ATOM 26 OP1 A B 179 72.925 102.740 18.049 1.00 43.73 O
ATOM 27 OP2 A B 179 73.343 105.187 18.681 1.00 46.45 O
ATOM 28 O5' A B 179 72.021 104.610 16.642 1.00 45.69 O
TER

Atoms:
OP1: (65.619,115.650,18.171)
OP2: (65.307,113.200,17.490)
C3': (61.045,115.443,16.020)
C1': (61.254,113.988,14.179)
C5': (63.478,116.137,15.884)
O4': (62.392,114.829,14.195)
C8: (62.882,112.285,15.135)
O2': (59.391,115.471,14.258)
C6: (61.397,109.144,14.633)
C5: (61.849,110.463,14.784)
C4: (60.995,111.471,14.373)
P: (65.246,114.641,17.154)
C4': (62.191,115.913,15.137)
C2': (60.188,114.634,15.062)
C2: (59.442,110.037,13.785)
N1: (60.163,108.960,14.128)
N3: (59.762,111.323,13.861)
N6: (62.121,108.071,14.950)
N7: (63.035,110.992,15.274)
N9: (61.685,112.645,14.565)
O5': (63.769,114.977,16.679)
O3': (60.335,116.544,16.570)
OP1: (73.238,105.403,23.742)
OP2: (73.293,107.859,23.027)
C3': (70.513,105.336,19.447)
C1': (68.553,106.631,19.746)
C5': (70.874,105.049,21.984)
O6: (68.482,112.594,19.153)
O4': (68.932,106.105,21.008)
C8: (69.864,108.721,20.359)
C2: (66.403,109.954,17.990)
C6: (68.088,111.435,18.986)
C5: (68.666,110.230,19.457)
C4: (68.057,109.036,19.142)
P: (72.518,106.631,23.314)
C4': (69.915,105.059,20.820)
C2': (69.297,105.833,18.671)
O2': (68.445,104.783,18.257)
N1: (66.930,111.194,18.249)
N2: (65.270,109.920,17.264)
N3: (66.942,108.826,18.415)
N7: (69.805,110.018,20.219)
N9: (68.822,108.067,19.744)
O5': (71.599,106.291,22.055)
O3': (71.051,104.131,18.901)
Image (generated by PyMOL):
PyMOL image
show in jmol