Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A465:A462
Extra
PDB:
ATOM 1 O3' G A 464 -42.703 -53.508 36.764 1.00 0.01 O
ATOM 2 P A A 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 3 OP1 A A 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 4 OP2 A A 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 5 O5' A A 465 -44.666 -54.556 37.802 1.00 0.01 O
ATOM 6 C5' A A 465 -44.911 -53.765 38.936 1.00 0.01 C
ATOM 7 C4' A A 465 -46.346 -53.372 39.018 1.00 0.01 C
ATOM 8 O4' A A 465 -46.724 -52.704 37.809 1.00 0.01 O
ATOM 9 C3' A A 465 -47.333 -54.501 39.103 1.00 0.01 C
ATOM 10 O3' A A 465 -47.418 -55.059 40.397 1.00 0.01 O
ATOM 11 C2' A A 465 -48.620 -53.837 38.614 1.00 0.01 C
ATOM 12 O2' A A 465 -49.216 -53.028 39.616 1.00 0.01 O
ATOM 13 C1' A A 465 -48.083 -52.920 37.542 1.00 0.01 C
ATOM 14 N9 A A 465 -48.195 -53.497 36.219 1.00 0.01 N
ATOM 15 C8 A A 465 -47.521 -54.556 35.741 1.00 0.01 C
ATOM 16 N7 A A 465 -47.805 -54.811 34.492 1.00 0.01 N
ATOM 17 C5 A A 465 -48.712 -53.852 34.136 1.00 0.01 C
ATOM 18 C6 A A 465 -49.379 -53.592 32.943 1.00 0.01 C
ATOM 19 N6 A A 465 -49.229 -54.327 31.860 1.00 0.01 N
ATOM 20 N1 A A 465 -50.216 -52.540 32.907 1.00 0.01 N
ATOM 21 C2 A A 465 -50.371 -51.814 34.018 1.00 0.01 C
ATOM 22 N3 A A 465 -49.794 -51.965 35.212 1.00 0.01 N
ATOM 23 C4 A A 465 -48.962 -53.022 35.202 1.00 0.01 C
ATOM 24 P G A 466 -46.939 -56.548 40.662 1.00 0.01 P
ATOM 25 OP1 G A 466 -47.262 -56.852 42.030 1.00 0.01 O
ATOM 26 OP2 G A 466 -45.562 -56.647 40.231 1.00 0.01 O
ATOM 27 O5' G A 466 -47.835 -57.395 39.709 1.00 0.01 O
TER
ATOM 1 O3' C B 461 -43.295 -60.545 24.950 1.00 0.01 O
ATOM 2 P G B 462 -42.365 -59.243 24.829 1.00 1.36 P
ATOM 3 OP1 G B 462 -42.580 -58.705 23.450 1.00 1.36 O
ATOM 4 OP2 G B 462 -40.977 -59.622 25.257 1.00 1.36 O
ATOM 5 O5' G B 462 -42.983 -58.263 25.894 1.00 1.36 O
ATOM 6 C5' G B 462 -44.191 -57.611 25.625 1.00 1.36 C
ATOM 7 C4' G B 462 -44.748 -56.993 26.859 1.00 1.36 C
ATOM 8 O4' G B 462 -44.802 -57.971 27.930 1.00 1.36 O
ATOM 9 C3' G B 462 -43.937 -55.878 27.484 1.00 1.36 C
ATOM 10 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 11 C2' G B 462 -44.623 -55.784 28.837 1.00 1.36 C
ATOM 12 O2' G B 462 -45.911 -55.183 28.722 1.00 1.36 O
ATOM 13 C1' G B 462 -44.799 -57.282 29.164 1.00 1.36 C
ATOM 14 N9 G B 462 -43.685 -57.758 29.993 1.00 1.32 N
ATOM 15 C8 G B 462 -42.484 -58.326 29.688 1.00 1.32 C
ATOM 16 N7 G B 462 -41.715 -58.494 30.743 1.00 1.32 N
ATOM 17 C5 G B 462 -42.437 -57.964 31.792 1.00 1.32 C
ATOM 18 C6 G B 462 -42.131 -57.826 33.165 1.00 1.32 C
ATOM 19 O6 G B 462 -41.134 -58.143 33.829 1.00 1.32 O
ATOM 20 N1 G B 462 -43.169 -57.203 33.819 1.00 1.32 N
ATOM 21 C2 G B 462 -44.334 -56.780 33.247 1.00 1.32 C
ATOM 22 N2 G B 462 -45.219 -56.225 34.065 1.00 1.32 N
ATOM 23 N3 G B 462 -44.637 -56.898 31.982 1.00 1.32 N
ATOM 24 C4 G B 462 -43.636 -57.493 31.329 1.00 1.32 C
ATOM 25 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 26 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 27 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 28 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
TER
ATOM 2 P A A 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 3 OP1 A A 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 4 OP2 A A 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 5 O5' A A 465 -44.666 -54.556 37.802 1.00 0.01 O
ATOM 6 C5' A A 465 -44.911 -53.765 38.936 1.00 0.01 C
ATOM 7 C4' A A 465 -46.346 -53.372 39.018 1.00 0.01 C
ATOM 8 O4' A A 465 -46.724 -52.704 37.809 1.00 0.01 O
ATOM 9 C3' A A 465 -47.333 -54.501 39.103 1.00 0.01 C
ATOM 10 O3' A A 465 -47.418 -55.059 40.397 1.00 0.01 O
ATOM 11 C2' A A 465 -48.620 -53.837 38.614 1.00 0.01 C
ATOM 12 O2' A A 465 -49.216 -53.028 39.616 1.00 0.01 O
ATOM 13 C1' A A 465 -48.083 -52.920 37.542 1.00 0.01 C
ATOM 14 N9 A A 465 -48.195 -53.497 36.219 1.00 0.01 N
ATOM 15 C8 A A 465 -47.521 -54.556 35.741 1.00 0.01 C
ATOM 16 N7 A A 465 -47.805 -54.811 34.492 1.00 0.01 N
ATOM 17 C5 A A 465 -48.712 -53.852 34.136 1.00 0.01 C
ATOM 18 C6 A A 465 -49.379 -53.592 32.943 1.00 0.01 C
ATOM 19 N6 A A 465 -49.229 -54.327 31.860 1.00 0.01 N
ATOM 20 N1 A A 465 -50.216 -52.540 32.907 1.00 0.01 N
ATOM 21 C2 A A 465 -50.371 -51.814 34.018 1.00 0.01 C
ATOM 22 N3 A A 465 -49.794 -51.965 35.212 1.00 0.01 N
ATOM 23 C4 A A 465 -48.962 -53.022 35.202 1.00 0.01 C
ATOM 24 P G A 466 -46.939 -56.548 40.662 1.00 0.01 P
ATOM 25 OP1 G A 466 -47.262 -56.852 42.030 1.00 0.01 O
ATOM 26 OP2 G A 466 -45.562 -56.647 40.231 1.00 0.01 O
ATOM 27 O5' G A 466 -47.835 -57.395 39.709 1.00 0.01 O
TER
ATOM 1 O3' C B 461 -43.295 -60.545 24.950 1.00 0.01 O
ATOM 2 P G B 462 -42.365 -59.243 24.829 1.00 1.36 P
ATOM 3 OP1 G B 462 -42.580 -58.705 23.450 1.00 1.36 O
ATOM 4 OP2 G B 462 -40.977 -59.622 25.257 1.00 1.36 O
ATOM 5 O5' G B 462 -42.983 -58.263 25.894 1.00 1.36 O
ATOM 6 C5' G B 462 -44.191 -57.611 25.625 1.00 1.36 C
ATOM 7 C4' G B 462 -44.748 -56.993 26.859 1.00 1.36 C
ATOM 8 O4' G B 462 -44.802 -57.971 27.930 1.00 1.36 O
ATOM 9 C3' G B 462 -43.937 -55.878 27.484 1.00 1.36 C
ATOM 10 O3' G B 462 -43.926 -54.668 26.731 1.00 1.36 O
ATOM 11 C2' G B 462 -44.623 -55.784 28.837 1.00 1.36 C
ATOM 12 O2' G B 462 -45.911 -55.183 28.722 1.00 1.36 O
ATOM 13 C1' G B 462 -44.799 -57.282 29.164 1.00 1.36 C
ATOM 14 N9 G B 462 -43.685 -57.758 29.993 1.00 1.32 N
ATOM 15 C8 G B 462 -42.484 -58.326 29.688 1.00 1.32 C
ATOM 16 N7 G B 462 -41.715 -58.494 30.743 1.00 1.32 N
ATOM 17 C5 G B 462 -42.437 -57.964 31.792 1.00 1.32 C
ATOM 18 C6 G B 462 -42.131 -57.826 33.165 1.00 1.32 C
ATOM 19 O6 G B 462 -41.134 -58.143 33.829 1.00 1.32 O
ATOM 20 N1 G B 462 -43.169 -57.203 33.819 1.00 1.32 N
ATOM 21 C2 G B 462 -44.334 -56.780 33.247 1.00 1.32 C
ATOM 22 N2 G B 462 -45.219 -56.225 34.065 1.00 1.32 N
ATOM 23 N3 G B 462 -44.637 -56.898 31.982 1.00 1.32 N
ATOM 24 C4 G B 462 -43.636 -57.493 31.329 1.00 1.32 C
ATOM 25 P U B 463 -42.528 -54.000 26.307 1.00 0.01 P
ATOM 26 OP1 U B 463 -42.816 -52.860 25.407 1.00 0.01 O
ATOM 27 OP2 U B 463 -41.655 -55.070 25.830 1.00 0.01 O
ATOM 28 O5' U B 463 -41.993 -53.480 27.676 1.00 0.01 O
TER
Atoms:
OP1: (-42.381,-55.145,38.559)
OP2: (-43.180,-55.853,36.300)
C3': (-47.333,-54.501,39.103)
C1': (-48.083,-52.920,37.542)
C5': (-44.911,-53.765,38.936)
O4': (-46.724,-52.704,37.809)
C8: (-47.521,-54.556,35.741)
O2': (-49.216,-53.028,39.616)
C6: (-49.379,-53.592,32.943)
C5: (-48.712,-53.852,34.136)
C4: (-48.962,-53.022,35.202)
P: (-43.192,-54.884,37.375)
C4': (-46.346,-53.372,39.018)
C2': (-48.620,-53.837,38.614)
C2: (-50.371,-51.814,34.018)
N1: (-50.216,-52.540,32.907)
N3: (-49.794,-51.965,35.212)
N6: (-49.229,-54.327,31.860)
N7: (-47.805,-54.811,34.492)
N9: (-48.195,-53.497,36.219)
O5': (-44.666,-54.556,37.802)
O3': (-47.418,-55.059,40.397)
OP2: (-43.180,-55.853,36.300)
C3': (-47.333,-54.501,39.103)
C1': (-48.083,-52.920,37.542)
C5': (-44.911,-53.765,38.936)
O4': (-46.724,-52.704,37.809)
C8: (-47.521,-54.556,35.741)
O2': (-49.216,-53.028,39.616)
C6: (-49.379,-53.592,32.943)
C5: (-48.712,-53.852,34.136)
C4: (-48.962,-53.022,35.202)
P: (-43.192,-54.884,37.375)
C4': (-46.346,-53.372,39.018)
C2': (-48.620,-53.837,38.614)
C2: (-50.371,-51.814,34.018)
N1: (-50.216,-52.540,32.907)
N3: (-49.794,-51.965,35.212)
N6: (-49.229,-54.327,31.860)
N7: (-47.805,-54.811,34.492)
N9: (-48.195,-53.497,36.219)
O5': (-44.666,-54.556,37.802)
O3': (-47.418,-55.059,40.397)
OP1: (-42.580,-58.705,23.450)
OP2: (-40.977,-59.622,25.257)
C3': (-43.937,-55.878,27.484)
C1': (-44.799,-57.282,29.164)
C5': (-44.191,-57.611,25.625)
O6: (-41.134,-58.143,33.829)
O4': (-44.802,-57.971,27.930)
C8: (-42.484,-58.326,29.688)
C2: (-44.334,-56.780,33.247)
C6: (-42.131,-57.826,33.165)
C5: (-42.437,-57.964,31.792)
C4: (-43.636,-57.493,31.329)
P: (-42.365,-59.243,24.829)
C4': (-44.748,-56.993,26.859)
C2': (-44.623,-55.784,28.837)
O2': (-45.911,-55.183,28.722)
N1: (-43.169,-57.203,33.819)
N2: (-45.219,-56.225,34.065)
N3: (-44.637,-56.898,31.982)
N7: (-41.715,-58.494,30.743)
N9: (-43.685,-57.758,29.993)
O5': (-42.983,-58.263,25.894)
O3': (-43.926,-54.668,26.731)
OP2: (-40.977,-59.622,25.257)
C3': (-43.937,-55.878,27.484)
C1': (-44.799,-57.282,29.164)
C5': (-44.191,-57.611,25.625)
O6: (-41.134,-58.143,33.829)
O4': (-44.802,-57.971,27.930)
C8: (-42.484,-58.326,29.688)
C2: (-44.334,-56.780,33.247)
C6: (-42.131,-57.826,33.165)
C5: (-42.437,-57.964,31.792)
C4: (-43.636,-57.493,31.329)
P: (-42.365,-59.243,24.829)
C4': (-44.748,-56.993,26.859)
C2': (-44.623,-55.784,28.837)
O2': (-45.911,-55.183,28.722)
N1: (-43.169,-57.203,33.819)
N2: (-45.219,-56.225,34.065)
N3: (-44.637,-56.898,31.982)
N7: (-41.715,-58.494,30.743)
N9: (-43.685,-57.758,29.993)
O5': (-42.983,-58.263,25.894)
O3': (-43.926,-54.668,26.731)
Image (generated by PyMOL):