ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:R111:R108

Extra

PDB:
ATOM 1 O3' G A 110 19.027 53.361 63.292 1.00 72.99 O
ATOM 2 P A A 111 18.040 52.097 63.346 1.00 72.05 P
ATOM 3 OP1 A A 111 17.022 52.291 62.286 1.00 71.79 O
ATOM 4 OP2 A A 111 17.598 51.888 64.745 1.00 71.72 O
ATOM 5 O5' A A 111 19.004 50.890 62.919 1.00 70.70 O
ATOM 6 C5' A A 111 19.442 50.776 61.567 1.00 69.14 C
ATOM 7 C4' A A 111 20.608 49.816 61.424 1.00 67.97 C
ATOM 8 O4' A A 111 21.713 50.249 62.255 1.00 67.19 O
ATOM 9 C3' A A 111 20.329 48.391 61.877 1.00 67.49 C
ATOM 10 O3' A A 111 19.692 47.661 60.842 1.00 67.68 O
ATOM 11 C2' A A 111 21.728 47.869 62.199 1.00 66.92 C
ATOM 12 O2' A A 111 22.430 47.389 61.067 1.00 66.88 O
ATOM 13 C1' A A 111 22.406 49.120 62.761 1.00 66.27 C
ATOM 14 N9 A A 111 22.408 49.177 64.223 1.00 64.77 N
ATOM 15 C8 A A 111 21.356 49.484 65.044 1.00 64.39 C
ATOM 16 N7 A A 111 21.644 49.452 66.324 1.00 63.85 N
ATOM 17 C5 A A 111 22.983 49.103 66.346 1.00 63.52 C
ATOM 18 C6 A A 111 23.895 48.902 67.401 1.00 62.92 C
ATOM 19 N6 A A 111 23.565 49.036 68.686 1.00 62.83 N
ATOM 20 N1 A A 111 25.162 48.556 67.087 1.00 62.75 N
ATOM 21 C2 A A 111 25.490 48.424 65.794 1.00 63.03 C
ATOM 22 N3 A A 111 24.722 48.585 64.714 1.00 63.40 N
ATOM 23 C4 A A 111 23.469 48.928 65.060 1.00 63.86 C
ATOM 24 P C A 112 18.519 46.631 61.194 1.00 68.32 P
ATOM 25 OP1 C A 112 18.232 45.836 59.980 1.00 68.05 O
ATOM 26 OP2 C A 112 17.433 47.387 61.856 1.00 67.99 O
ATOM 27 O5' C A 112 19.205 45.661 62.267 1.00 67.96 O
TER

ATOM 1 O3' G B 107 18.828 52.925 77.307 1.00 86.36 O
ATOM 2 P G B 108 19.154 54.493 77.250 1.00 86.53 P
ATOM 3 OP1 G B 108 19.828 54.830 78.524 1.00 86.55 O
ATOM 4 OP2 G B 108 17.938 55.236 76.838 1.00 86.17 O
ATOM 5 O5' G B 108 20.233 54.596 76.073 1.00 86.39 O
ATOM 6 C5' G B 108 19.831 54.724 74.716 1.00 86.05 C
ATOM 7 C4' G B 108 20.731 53.900 73.817 1.00 85.76 C
ATOM 8 O4' G B 108 20.004 52.736 73.340 1.00 85.69 O
ATOM 9 C3' G B 108 21.188 54.634 72.564 1.00 85.48 C
ATOM 10 O3' G B 108 22.398 55.363 72.805 1.00 85.00 O
ATOM 11 C2' G B 108 21.354 53.486 71.570 1.00 85.55 C
ATOM 12 O2' G B 108 22.564 52.769 71.729 1.00 85.70 O
ATOM 13 C1' G B 108 20.158 52.607 71.936 1.00 85.65 C
ATOM 14 N9 G B 108 18.925 52.997 71.237 1.00 85.56 N
ATOM 15 C8 G B 108 17.872 53.733 71.735 1.00 85.61 C
ATOM 16 N7 G B 108 16.914 53.935 70.874 1.00 85.55 N
ATOM 17 C5 G B 108 17.354 53.294 69.724 1.00 85.36 C
ATOM 18 C6 G B 108 16.735 53.172 68.454 1.00 85.29 C
ATOM 19 O6 G B 108 15.637 53.620 68.089 1.00 85.31 O
ATOM 20 N1 G B 108 17.518 52.443 67.559 1.00 85.20 N
ATOM 21 C2 G B 108 18.747 51.899 67.857 1.00 85.20 C
ATOM 22 N2 G B 108 19.356 51.229 66.870 1.00 85.27 N
ATOM 23 N3 G B 108 19.337 52.007 69.042 1.00 85.30 N
ATOM 24 C4 G B 108 18.589 52.714 69.929 1.00 85.39 C
ATOM 25 P U B 109 22.446 56.951 72.576 1.00 84.52 P
ATOM 26 OP1 U B 109 23.868 57.358 72.550 1.00 84.62 O
ATOM 27 OP2 U B 109 21.523 57.580 73.549 1.00 84.77 O
ATOM 28 O5' U B 109 21.829 57.132 71.107 1.00 83.62 O
TER

Atoms:
OP1: (17.022,52.291,62.286)
OP2: (17.598,51.888,64.745)
C3': (20.329,48.391,61.877)
C1': (22.406,49.120,62.761)
C5': (19.442,50.776,61.567)
O4': (21.713,50.249,62.255)
C8: (21.356,49.484,65.044)
O2': (22.430,47.389,61.067)
C6: (23.895,48.902,67.401)
C5: (22.983,49.103,66.346)
C4: (23.469,48.928,65.060)
P: (18.040,52.097,63.346)
C4': (20.608,49.816,61.424)
C2': (21.728,47.869,62.199)
C2: (25.490,48.424,65.794)
N1: (25.162,48.556,67.087)
N3: (24.722,48.585,64.714)
N6: (23.565,49.036,68.686)
N7: (21.644,49.452,66.324)
N9: (22.408,49.177,64.223)
O5': (19.004,50.890,62.919)
O3': (19.692,47.661,60.842)
OP1: (19.828,54.830,78.524)
OP2: (17.938,55.236,76.838)
C3': (21.188,54.634,72.564)
C1': (20.158,52.607,71.936)
C5': (19.831,54.724,74.716)
O6: (15.637,53.620,68.089)
O4': (20.004,52.736,73.340)
C8: (17.872,53.733,71.735)
C2: (18.747,51.899,67.857)
C6: (16.735,53.172,68.454)
C5: (17.354,53.294,69.724)
C4: (18.589,52.714,69.929)
P: (19.154,54.493,77.250)
C4': (20.731,53.900,73.817)
C2': (21.354,53.486,71.570)
O2': (22.564,52.769,71.729)
N1: (17.518,52.443,67.559)
N2: (19.356,51.229,66.870)
N3: (19.337,52.007,69.042)
N7: (16.914,53.935,70.874)
N9: (18.925,52.997,71.237)
O5': (20.233,54.596,76.073)
O3': (22.398,55.363,72.805)
Image (generated by PyMOL):
PyMOL image
show in jmol