ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1G59:B16:B17

Extra

PDB:
ATOM 1 O3' C A 15 4.572 73.535 39.886 1.00 74.08 O
ATOM 2 P G A 16 3.969 75.050 39.812 1.00 73.02 P
ATOM 3 OP1 G A 16 2.949 75.085 38.733 1.00 71.64 O
ATOM 4 OP2 G A 16 5.088 76.030 39.803 1.00 73.69 O
ATOM 5 O5' G A 16 3.179 75.161 41.245 1.00 70.28 O
ATOM 6 C5' G A 16 3.236 74.085 42.200 1.00 67.48 C
ATOM 7 C4' G A 16 1.865 73.466 42.469 1.00 65.57 C
ATOM 8 O4' G A 16 1.035 74.397 43.217 1.00 64.90 O
ATOM 9 C3' G A 16 1.137 73.163 41.149 1.00 67.51 C
ATOM 10 O3' G A 16 1.040 71.716 40.859 1.00 67.70 O
ATOM 11 C2' G A 16 -0.223 73.800 41.262 1.00 66.34 C
ATOM 12 O2' G A 16 -1.257 72.830 41.074 1.00 69.21 O
ATOM 13 C1' G A 16 -0.300 74.410 42.653 1.00 65.50 C
ATOM 14 N9 G A 16 -0.842 75.805 42.596 1.00 60.39 N
ATOM 15 C8 G A 16 -0.597 76.784 41.672 1.00 61.96 C
ATOM 16 N7 G A 16 -1.232 77.913 41.910 1.00 60.40 N
ATOM 17 C5 G A 16 -1.949 77.658 43.072 1.00 62.10 C
ATOM 18 C6 G A 16 -2.821 78.500 43.802 1.00 59.87 C
ATOM 19 O6 G A 16 -3.173 79.650 43.526 1.00 67.78 O
ATOM 20 N1 G A 16 -3.340 77.869 44.919 1.00 56.57 N
ATOM 21 C2 G A 16 -3.072 76.578 45.302 1.00 56.22 C
ATOM 22 N2 G A 16 -3.670 76.158 46.417 1.00 45.18 N
ATOM 23 N3 G A 16 -2.252 75.766 44.615 1.00 62.73 N
ATOM 24 C4 G A 16 -1.723 76.373 43.509 1.00 62.14 C
ATOM 25 P G A 17 0.754 70.523 42.002 1.00 67.04 P
ATOM 26 OP1 G A 17 1.765 70.661 43.094 1.00 66.11 O
ATOM 27 OP2 G A 17 0.621 69.233 41.281 1.00 69.97 O
ATOM 28 O5' G A 17 -0.732 70.858 42.632 1.00 72.04 O
TER

ATOM 1 O3' G B 16 1.040 71.716 40.859 1.00 67.70 O
ATOM 2 P G B 17 0.754 70.523 42.002 1.00 67.04 P
ATOM 3 OP1 G B 17 1.765 70.661 43.094 1.00 66.11 O
ATOM 4 OP2 G B 17 0.621 69.233 41.281 1.00 69.97 O
ATOM 5 O5' G B 17 -0.732 70.858 42.632 1.00 72.04 O
ATOM 6 C5' G B 17 -1.028 70.543 44.029 1.00 69.42 C
ATOM 7 C4' G B 17 -2.068 69.383 44.209 1.00 66.15 C
ATOM 8 O4' G B 17 -3.381 69.787 43.732 1.00 66.73 O
ATOM 9 C3' G B 17 -1.646 68.163 43.430 1.00 65.26 C
ATOM 10 O3' G B 17 -1.478 66.990 44.310 1.00 66.78 O
ATOM 11 C2' G B 17 -2.707 67.943 42.354 1.00 61.41 C
ATOM 12 O2' G B 17 -3.243 66.623 42.365 1.00 56.19 O
ATOM 13 C1' G B 17 -3.790 68.946 42.613 1.00 60.22 C
ATOM 14 N9 G B 17 -4.028 69.805 41.443 1.00 58.35 N
ATOM 15 C8 G B 17 -3.371 69.852 40.243 1.00 55.16 C
ATOM 16 N7 G B 17 -3.825 70.766 39.427 1.00 53.96 N
ATOM 17 C5 G B 17 -4.857 71.362 40.141 1.00 58.82 C
ATOM 18 C6 G B 17 -5.733 72.431 39.778 1.00 58.87 C
ATOM 19 O6 G B 17 -5.735 73.101 38.736 1.00 57.70 O
ATOM 20 N1 G B 17 -6.636 72.717 40.796 1.00 59.75 N
ATOM 21 C2 G B 17 -6.696 72.066 42.017 1.00 61.70 C
ATOM 22 N2 G B 17 -7.637 72.479 42.873 1.00 61.22 N
ATOM 23 N3 G B 17 -5.877 71.073 42.356 1.00 61.30 N
ATOM 24 C4 G B 17 -4.986 70.774 41.375 1.00 60.54 C
ATOM 25 P U B 18 -2.671 66.358 45.268 1.00 63.91 P
ATOM 26 OP1 U B 18 -3.991 66.696 44.698 1.00 68.54 O
ATOM 27 OP2 U B 18 -2.372 66.692 46.676 1.00 59.17 O
ATOM 28 O5' U B 18 -2.432 64.780 45.061 1.00 64.63 O
TER

Atoms:
OP1: (2.949,75.085,38.733)
OP2: (5.088,76.030,39.803)
C3': (1.137,73.163,41.149)
C1': (-0.300,74.410,42.653)
C5': (3.236,74.085,42.200)
O6: (-3.173,79.650,43.526)
O4': (1.035,74.397,43.217)
C8: (-0.597,76.784,41.672)
C2: (-3.072,76.578,45.302)
C6: (-2.821,78.500,43.802)
C5: (-1.949,77.658,43.072)
C4: (-1.723,76.373,43.509)
P: (3.969,75.050,39.812)
C4': (1.865,73.466,42.469)
C2': (-0.223,73.800,41.262)
O2': (-1.257,72.830,41.074)
N1: (-3.340,77.869,44.919)
N2: (-3.670,76.158,46.417)
N3: (-2.252,75.766,44.615)
N7: (-1.232,77.913,41.910)
N9: (-0.842,75.805,42.596)
O5': (3.179,75.161,41.245)
O3': (1.040,71.716,40.859)
OP1: (1.765,70.661,43.094)
OP2: (0.621,69.233,41.281)
C3': (-1.646,68.163,43.430)
C1': (-3.790,68.946,42.613)
C5': (-1.028,70.543,44.029)
O6: (-5.735,73.101,38.736)
O4': (-3.381,69.787,43.732)
C8: (-3.371,69.852,40.243)
C2: (-6.696,72.066,42.017)
C6: (-5.733,72.431,39.778)
C5: (-4.857,71.362,40.141)
C4: (-4.986,70.774,41.375)
P: (0.754,70.523,42.002)
C4': (-2.068,69.383,44.209)
C2': (-2.707,67.943,42.354)
O2': (-3.243,66.623,42.365)
N1: (-6.636,72.717,40.796)
N2: (-7.637,72.479,42.873)
N3: (-5.877,71.073,42.356)
N7: (-3.825,70.766,39.427)
N9: (-4.028,69.805,41.443)
O5': (-0.732,70.858,42.632)
O3': (-1.478,66.990,44.310)
Image (generated by PyMOL):
PyMOL image
show in jmol