ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2CV1:C16:C17

Extra

PDB:
ATOM 1 O3' C A 15 5.444 74.444 41.107 1.00 96.69 O
ATOM 2 P G A 16 4.205 74.751 40.122 1.00 93.29 P
ATOM 3 OP1 G A 16 4.478 74.169 38.785 1.00 93.02 O
ATOM 4 OP2 G A 16 3.879 76.192 40.239 1.00 89.25 O
ATOM 5 O5' G A 16 3.005 73.938 40.771 1.00 91.38 O
ATOM 6 C5' G A 16 2.187 74.546 41.751 1.00 90.74 C
ATOM 7 C4' G A 16 1.372 73.510 42.476 1.00 90.26 C
ATOM 8 O4' G A 16 0.567 74.212 43.454 1.00 91.03 O
ATOM 9 C3' G A 16 0.373 72.757 41.607 1.00 91.51 C
ATOM 10 O3' G A 16 0.532 71.366 41.314 1.00 91.17 O
ATOM 11 C2' G A 16 -0.976 73.441 41.762 1.00 92.22 C
ATOM 12 O2' G A 16 -2.023 72.514 41.949 1.00 98.48 O
ATOM 13 C1' G A 16 -0.794 74.231 43.058 1.00 92.04 C
ATOM 14 N9 G A 16 -1.203 75.621 42.903 1.00 89.31 N
ATOM 15 C8 G A 16 -0.805 76.504 41.927 1.00 87.55 C
ATOM 16 N7 G A 16 -1.353 77.682 42.049 1.00 86.98 N
ATOM 17 C5 G A 16 -2.161 77.568 43.173 1.00 88.86 C
ATOM 18 C6 G A 16 -3.005 78.518 43.798 1.00 88.83 C
ATOM 19 O6 G A 16 -3.224 79.687 43.464 1.00 91.48 O
ATOM 20 N1 G A 16 -3.634 77.983 44.923 1.00 87.32 N
ATOM 21 C2 G A 16 -3.476 76.696 45.382 1.00 83.76 C
ATOM 22 N2 G A 16 -4.158 76.365 46.486 1.00 79.01 N
ATOM 23 N3 G A 16 -2.704 75.801 44.800 1.00 85.18 N
ATOM 24 C4 G A 16 -2.078 76.302 43.711 1.00 88.69 C
ATOM 25 P G A 17 0.345 70.254 42.478 1.00 92.08 P
ATOM 26 OP1 G A 17 1.119 70.681 43.680 1.00 91.80 O
ATOM 27 OP2 G A 17 0.638 68.946 41.841 1.00 94.52 O
ATOM 28 O5' G A 17 -1.197 70.229 42.883 1.00 89.66 O
TER

ATOM 1 O3' G B 16 0.532 71.366 41.314 1.00 91.17 O
ATOM 2 P G B 17 0.345 70.254 42.478 1.00 92.08 P
ATOM 3 OP1 G B 17 1.119 70.681 43.680 1.00 91.80 O
ATOM 4 OP2 G B 17 0.638 68.946 41.841 1.00 94.52 O
ATOM 5 O5' G B 17 -1.197 70.229 42.883 1.00 89.66 O
ATOM 6 C5' G B 17 -1.576 70.137 44.264 1.00 85.97 C
ATOM 7 C4' G B 17 -2.643 69.079 44.473 1.00 84.31 C
ATOM 8 O4' G B 17 -3.889 69.498 43.860 1.00 84.61 O
ATOM 9 C3' G B 17 -2.327 67.735 43.841 1.00 83.25 C
ATOM 10 O3' G B 17 -2.069 66.625 44.707 1.00 82.25 O
ATOM 11 C2' G B 17 -3.061 67.677 42.503 1.00 82.19 C
ATOM 12 O2' G B 17 -3.664 66.432 42.221 1.00 75.66 O
ATOM 13 C1' G B 17 -4.164 68.719 42.706 1.00 84.81 C
ATOM 14 N9 G B 17 -4.399 69.632 41.591 1.00 86.90 N
ATOM 15 C8 G B 17 -3.689 69.754 40.417 1.00 85.77 C
ATOM 16 N7 G B 17 -4.163 70.681 39.626 1.00 85.92 N
ATOM 17 C5 G B 17 -5.250 71.202 40.319 1.00 89.84 C
ATOM 18 C6 G B 17 -6.157 72.248 39.976 1.00 90.07 C
ATOM 19 O6 G B 17 -6.175 72.953 38.955 1.00 86.43 O
ATOM 20 N1 G B 17 -7.114 72.445 40.975 1.00 90.29 N
ATOM 21 C2 G B 17 -7.188 71.740 42.157 1.00 90.68 C
ATOM 22 N2 G B 17 -8.187 72.077 43.001 1.00 87.72 N
ATOM 23 N3 G B 17 -6.345 70.774 42.490 1.00 91.36 N
ATOM 24 C4 G B 17 -5.411 70.559 41.531 1.00 89.97 C
ATOM 25 P U B 18 -3.289 65.773 45.323 1.00 75.96 P
ATOM 26 OP1 U B 18 -4.562 66.172 44.682 1.00 81.04 O
ATOM 27 OP2 U B 18 -3.154 65.845 46.799 1.00 74.12 O
ATOM 28 O5' U B 18 -2.964 64.280 44.890 1.00 75.86 O
TER

Atoms:
OP1: (4.478,74.169,38.785)
OP2: (3.879,76.192,40.239)
C3': (0.373,72.757,41.607)
C1': (-0.794,74.231,43.058)
C5': (2.187,74.546,41.751)
O6: (-3.224,79.687,43.464)
O4': (0.567,74.212,43.454)
C8: (-0.805,76.504,41.927)
C2: (-3.476,76.696,45.382)
C6: (-3.005,78.518,43.798)
C5: (-2.161,77.568,43.173)
C4: (-2.078,76.302,43.711)
P: (4.205,74.751,40.122)
C4': (1.372,73.510,42.476)
C2': (-0.976,73.441,41.762)
O2': (-2.023,72.514,41.949)
N1: (-3.634,77.983,44.923)
N2: (-4.158,76.365,46.486)
N3: (-2.704,75.801,44.800)
N7: (-1.353,77.682,42.049)
N9: (-1.203,75.621,42.903)
O5': (3.005,73.938,40.771)
O3': (0.532,71.366,41.314)
OP1: (1.119,70.681,43.680)
OP2: (0.638,68.946,41.841)
C3': (-2.327,67.735,43.841)
C1': (-4.164,68.719,42.706)
C5': (-1.576,70.137,44.264)
O6: (-6.175,72.953,38.955)
O4': (-3.889,69.498,43.860)
C8: (-3.689,69.754,40.417)
C2: (-7.188,71.740,42.157)
C6: (-6.157,72.248,39.976)
C5: (-5.250,71.202,40.319)
C4: (-5.411,70.559,41.531)
P: (0.345,70.254,42.478)
C4': (-2.643,69.079,44.473)
C2': (-3.061,67.677,42.503)
O2': (-3.664,66.432,42.221)
N1: (-7.114,72.445,40.975)
N2: (-8.187,72.077,43.001)
N3: (-6.345,70.774,42.490)
N7: (-4.163,70.681,39.626)
N9: (-4.399,69.632,41.591)
O5': (-1.197,70.229,42.883)
O3': (-2.069,66.625,44.707)
Image (generated by PyMOL):
PyMOL image
show in jmol