ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZM5:C17:C18

Extra

PDB:
ATOM 1 O3' C A 16 52.823 49.153 52.519 1.00 42.76 O
ATOM 2 P G A 17 53.649 47.821 52.775 1.00 45.76 P
ATOM 3 OP1 G A 17 55.044 48.025 52.311 1.00 45.74 O
ATOM 4 OP2 G A 17 52.830 46.720 52.206 1.00 45.64 O
ATOM 5 O5' G A 17 53.683 47.720 54.357 1.00 42.43 O
ATOM 6 C5' G A 17 52.531 47.346 55.101 1.00 45.20 C
ATOM 7 C4' G A 17 52.978 46.473 56.231 1.00 46.43 C
ATOM 8 O4' G A 17 53.656 45.345 55.654 1.00 47.99 O
ATOM 9 C3' G A 17 53.963 47.220 57.130 1.00 47.41 C
ATOM 10 O3' G A 17 53.425 47.171 58.482 1.00 47.73 O
ATOM 11 C2' G A 17 55.311 46.517 56.896 1.00 46.82 C
ATOM 12 O2' G A 17 56.182 46.274 57.957 1.00 48.27 O
ATOM 13 C1' G A 17 54.880 45.182 56.294 1.00 47.90 C
ATOM 14 N9 G A 17 55.790 44.416 55.449 1.00 46.54 N
ATOM 15 C8 G A 17 56.351 44.765 54.245 1.00 45.01 C
ATOM 16 N7 G A 17 57.103 43.821 53.748 1.00 43.86 N
ATOM 17 C5 G A 17 57.031 42.794 54.680 1.00 43.81 C
ATOM 18 C6 G A 17 57.617 41.498 54.675 1.00 44.42 C
ATOM 19 O6 G A 17 58.337 40.980 53.814 1.00 47.52 O
ATOM 20 N1 G A 17 57.281 40.779 55.817 1.00 44.04 N
ATOM 21 C2 G A 17 56.478 41.245 56.830 1.00 43.61 C
ATOM 22 N2 G A 17 56.274 40.416 57.864 1.00 39.74 N
ATOM 23 N3 G A 17 55.917 42.442 56.833 1.00 42.01 N
ATOM 24 C4 G A 17 56.235 43.153 55.737 1.00 43.14 C
ATOM 25 P G A 18 54.158 47.921 59.689 1.00 46.85 P
ATOM 26 OP1 G A 18 53.672 49.323 59.696 1.00 52.49 O
ATOM 27 OP2 G A 18 55.596 47.661 59.570 1.00 54.13 O
ATOM 28 O5' G A 18 53.652 47.232 61.045 1.00 48.05 O
TER

ATOM 1 O3' G B 17 53.425 47.171 58.482 1.00 47.73 O
ATOM 2 P G B 18 54.158 47.921 59.689 1.00 46.85 P
ATOM 3 OP1 G B 18 53.672 49.323 59.696 1.00 52.49 O
ATOM 4 OP2 G B 18 55.596 47.661 59.570 1.00 54.13 O
ATOM 5 O5' G B 18 53.652 47.232 61.045 1.00 48.05 O
ATOM 6 C5' G B 18 54.051 45.914 61.476 1.00 46.15 C
ATOM 7 C4' G B 18 54.920 45.965 62.741 1.00 46.13 C
ATOM 8 O4' G B 18 56.254 45.574 62.488 1.00 46.55 O
ATOM 9 C3' G B 18 54.926 47.137 63.720 1.00 48.38 C
ATOM 10 O3' G B 18 54.902 46.435 64.968 1.00 48.82 O
ATOM 11 C2' G B 18 56.357 47.691 63.655 1.00 46.54 C
ATOM 12 O2' G B 18 56.932 48.029 64.903 1.00 48.25 O
ATOM 13 C1' G B 18 57.129 46.528 63.007 1.00 46.63 C
ATOM 14 N9 G B 18 58.071 46.778 61.941 1.00 44.32 N
ATOM 15 C8 G B 18 58.067 47.779 61.012 1.00 44.16 C
ATOM 16 N7 G B 18 59.019 47.654 60.135 1.00 43.92 N
ATOM 17 C5 G B 18 59.700 46.512 60.534 1.00 43.21 C
ATOM 18 C6 G B 18 60.816 45.872 59.974 1.00 40.70 C
ATOM 19 O6 G B 18 61.470 46.205 58.994 1.00 45.08 O
ATOM 20 N1 G B 18 61.155 44.729 60.672 1.00 37.89 N
ATOM 21 C2 G B 18 60.500 44.260 61.774 1.00 40.78 C
ATOM 22 N2 G B 18 60.948 43.131 62.294 1.00 41.52 N
ATOM 23 N3 G B 18 59.469 44.857 62.322 1.00 41.96 N
ATOM 24 C4 G B 18 59.124 45.970 61.651 1.00 42.83 C
ATOM 25 P U B 19 53.945 46.854 66.167 1.00 51.45 P
ATOM 26 OP1 U B 19 53.400 48.234 66.077 1.00 53.03 O
ATOM 27 OP2 U B 19 54.667 46.429 67.385 1.00 53.55 O
ATOM 28 O5' U B 19 52.789 45.801 65.989 1.00 56.54 O
TER

Atoms:
OP1: (55.044,48.025,52.311)
OP2: (52.830,46.720,52.206)
C3': (53.963,47.220,57.130)
C1': (54.880,45.182,56.294)
C5': (52.531,47.346,55.101)
O6: (58.337,40.980,53.814)
O4': (53.656,45.345,55.654)
C8: (56.351,44.765,54.245)
C2: (56.478,41.245,56.830)
C6: (57.617,41.498,54.675)
C5: (57.031,42.794,54.680)
C4: (56.235,43.153,55.737)
P: (53.649,47.821,52.775)
C4': (52.978,46.473,56.231)
C2': (55.311,46.517,56.896)
O2': (56.182,46.274,57.957)
N1: (57.281,40.779,55.817)
N2: (56.274,40.416,57.864)
N3: (55.917,42.442,56.833)
N7: (57.103,43.821,53.748)
N9: (55.790,44.416,55.449)
O5': (53.683,47.720,54.357)
O3': (53.425,47.171,58.482)
OP1: (53.672,49.323,59.696)
OP2: (55.596,47.661,59.570)
C3': (54.926,47.137,63.720)
C1': (57.129,46.528,63.007)
C5': (54.051,45.914,61.476)
O6: (61.470,46.205,58.994)
O4': (56.254,45.574,62.488)
C8: (58.067,47.779,61.012)
C2: (60.500,44.260,61.774)
C6: (60.816,45.872,59.974)
C5: (59.700,46.512,60.534)
C4: (59.124,45.970,61.651)
P: (54.158,47.921,59.689)
C4': (54.920,45.965,62.741)
C2': (56.357,47.691,63.655)
O2': (56.932,48.029,64.903)
N1: (61.155,44.729,60.672)
N2: (60.948,43.131,62.294)
N3: (59.469,44.857,62.322)
N7: (59.019,47.654,60.135)
N9: (58.071,46.778,61.941)
O5': (53.652,47.232,61.045)
O3': (54.902,46.435,64.968)
Image (generated by PyMOL):
PyMOL image
show in jmol