ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0423:0178

Extra

PDB:
ATOM 1 O3' U A 422 66.195 115.002 15.782 1.00 45.12 O
ATOM 2 P A A 423 65.278 114.766 17.075 1.00 45.73 P
ATOM 3 OP1 A A 423 65.614 115.802 18.080 1.00 48.29 O
ATOM 4 OP2 A A 423 65.368 113.328 17.439 1.00 45.99 O
ATOM 5 O5' A A 423 63.806 115.075 16.565 1.00 45.61 O
ATOM 6 C5' A A 423 63.516 116.243 15.780 1.00 43.70 C
ATOM 7 C4' A A 423 62.217 116.040 15.043 1.00 45.01 C
ATOM 8 O4' A A 423 62.390 114.968 14.083 1.00 46.07 O
ATOM 9 C3' A A 423 61.080 115.577 15.937 1.00 46.37 C
ATOM 10 O3' A A 423 60.392 116.688 16.490 1.00 47.60 O
ATOM 11 C2' A A 423 60.201 114.781 14.988 1.00 45.58 C
ATOM 12 O2' A A 423 59.392 115.632 14.210 1.00 47.77 O
ATOM 13 C1' A A 423 61.249 114.131 14.085 1.00 44.36 C
ATOM 14 N9 A A 423 61.686 112.792 14.479 1.00 45.03 N
ATOM 15 C8 A A 423 62.884 112.444 15.058 1.00 43.93 C
ATOM 16 N7 A A 423 63.036 111.154 15.222 1.00 44.33 N
ATOM 17 C5 A A 423 61.854 110.614 14.735 1.00 43.91 C
ATOM 18 C6 A A 423 61.405 109.291 14.605 1.00 42.95 C
ATOM 19 N6 A A 423 62.130 108.224 14.944 1.00 43.01 N
ATOM 20 N1 A A 423 60.174 109.096 14.095 1.00 45.27 N
ATOM 21 C2 A A 423 59.454 110.166 13.727 1.00 45.61 C
ATOM 22 N3 A A 423 59.773 111.455 13.783 1.00 44.44 N
ATOM 23 C4 A A 423 61.001 111.614 14.301 1.00 44.18 C
ATOM 24 P A A 424 59.628 116.531 17.888 1.00 48.25 P
ATOM 25 OP1 A A 424 58.811 117.752 18.104 1.00 49.75 O
ATOM 26 OP2 A A 424 60.636 116.129 18.897 1.00 48.30 O
ATOM 27 O5' A A 424 58.651 115.297 17.653 1.00 49.66 O
TER

ATOM 1 O3' A B 177 71.476 107.063 24.390 1.00 39.91 O
ATOM 2 P G B 178 72.563 106.734 23.264 1.00 39.94 P
ATOM 3 OP1 G B 178 73.275 105.507 23.712 1.00 41.80 O
ATOM 4 OP2 G B 178 73.350 107.964 23.001 1.00 44.27 O
ATOM 5 O5' G B 178 71.666 106.399 21.987 1.00 41.98 O
ATOM 6 C5' G B 178 70.931 105.158 21.907 1.00 40.70 C
ATOM 7 C4' G B 178 70.002 105.162 20.716 1.00 40.89 C
ATOM 8 O4' G B 178 68.995 106.188 20.889 1.00 41.13 O
ATOM 9 C3' G B 178 70.628 105.449 19.355 1.00 41.08 C
ATOM 10 O3' G B 178 71.173 104.239 18.810 1.00 41.69 O
ATOM 11 C2' G B 178 69.425 105.948 18.559 1.00 41.66 C
ATOM 12 O2' G B 178 68.575 104.903 18.133 1.00 42.12 O
ATOM 13 C1' G B 178 68.651 106.729 19.624 1.00 42.13 C
ATOM 14 N9 G B 178 68.902 108.166 19.657 1.00 42.47 N
ATOM 15 C8 G B 178 69.934 108.816 20.292 1.00 42.36 C
ATOM 16 N7 G B 178 69.853 110.115 20.201 1.00 40.83 N
ATOM 17 C5 G B 178 68.714 110.336 19.442 1.00 41.79 C
ATOM 18 C6 G B 178 68.127 111.543 19.009 1.00 43.32 C
ATOM 19 O6 G B 178 68.517 112.697 19.204 1.00 44.95 O
ATOM 20 N1 G B 178 66.970 111.315 18.265 1.00 43.26 N
ATOM 21 C2 G B 178 66.461 110.077 17.961 1.00 42.50 C
ATOM 22 N2 G B 178 65.341 110.053 17.218 1.00 42.55 N
ATOM 23 N3 G B 178 67.010 108.942 18.353 1.00 42.49 N
ATOM 24 C4 G B 178 68.122 109.144 19.087 1.00 42.07 C
ATOM 25 P A B 179 72.569 104.257 18.012 1.00 43.51 P
ATOM 26 OP1 A B 179 73.058 102.855 17.954 1.00 43.98 O
ATOM 27 OP2 A B 179 73.464 105.307 18.560 1.00 46.78 O
ATOM 28 O5' A B 179 72.135 104.691 16.540 1.00 45.97 O
TER

Atoms:
OP1: (65.614,115.802,18.080)
OP2: (65.368,113.328,17.439)
C3': (61.080,115.577,15.937)
C1': (61.249,114.131,14.085)
C5': (63.516,116.243,15.780)
O4': (62.390,114.968,14.083)
C8: (62.884,112.444,15.058)
O2': (59.392,115.632,14.210)
C6: (61.405,109.291,14.605)
C5: (61.854,110.614,14.735)
C4: (61.001,111.614,14.301)
P: (65.278,114.766,17.075)
C4': (62.217,116.040,15.043)
C2': (60.201,114.781,14.988)
C2: (59.454,110.166,13.727)
N1: (60.174,109.096,14.095)
N3: (59.773,111.455,13.783)
N6: (62.130,108.224,14.944)
N7: (63.036,111.154,15.222)
N9: (61.686,112.792,14.479)
O5': (63.806,115.075,16.565)
O3': (60.392,116.688,16.490)
OP1: (73.275,105.507,23.712)
OP2: (73.350,107.964,23.001)
C3': (70.628,105.449,19.355)
C1': (68.651,106.729,19.624)
C5': (70.931,105.158,21.907)
O6: (68.517,112.697,19.204)
O4': (68.995,106.188,20.889)
C8: (69.934,108.816,20.292)
C2: (66.461,110.077,17.961)
C6: (68.127,111.543,19.009)
C5: (68.714,110.336,19.442)
C4: (68.122,109.144,19.087)
P: (72.563,106.734,23.264)
C4': (70.002,105.162,20.716)
C2': (69.425,105.948,18.559)
O2': (68.575,104.903,18.133)
N1: (66.970,111.315,18.265)
N2: (65.341,110.053,17.218)
N3: (67.010,108.942,18.353)
N7: (69.853,110.115,20.201)
N9: (68.902,108.166,19.657)
O5': (71.666,106.399,21.987)
O3': (71.173,104.239,18.810)
Image (generated by PyMOL):
PyMOL image
show in jmol