ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KFU:M15:M16

Extra

PDB:
ATOM 1 P G A 15 -6.062 -41.116 98.606 1.00172.16 P
ATOM 2 OP1 G A 15 -7.096 -41.651 99.531 1.00 96.79 O
ATOM 3 OP2 G A 15 -4.753 -41.810 98.487 1.00126.91 O
ATOM 4 O5' G A 15 -6.683 -40.834 97.165 1.00197.68 O
ATOM 5 C5' G A 15 -7.181 -39.544 96.827 1.00197.82 C
ATOM 6 C4' G A 15 -7.854 -39.535 95.476 1.00200.50 C
ATOM 7 O4' G A 15 -6.840 -39.528 94.432 1.00206.30 O
ATOM 8 C3' G A 15 -8.758 -40.733 95.185 1.00211.06 C
ATOM 9 O3' G A 15 -9.867 -40.303 94.398 1.00218.11 O
ATOM 10 C2' G A 15 -7.859 -41.632 94.342 1.00232.04 C
ATOM 11 O2' G A 15 -8.550 -42.534 93.503 1.00142.02 O
ATOM 12 C1' G A 15 -7.078 -40.598 93.540 1.00228.15 C
ATOM 13 N9 G A 15 -5.789 -41.077 93.035 1.00136.70 N
ATOM 14 C8 G A 15 -4.816 -41.768 93.713 1.00150.58 C
ATOM 15 N7 G A 15 -3.782 -42.052 92.968 1.00163.21 N
ATOM 16 C5 G A 15 -4.092 -41.519 91.724 1.00161.58 C
ATOM 17 C6 G A 15 -3.356 -41.512 90.510 1.00175.09 C
ATOM 18 O6 G A 15 -2.240 -41.994 90.281 1.00184.33 O
ATOM 19 N1 G A 15 -4.051 -40.859 89.497 1.00178.15 N
ATOM 20 C2 G A 15 -5.291 -40.285 89.630 1.00182.75 C
ATOM 21 N2 G A 15 -5.800 -39.700 88.536 1.00195.14 N
ATOM 22 N3 G A 15 -5.985 -40.286 90.755 1.00168.44 N
ATOM 23 C4 G A 15 -5.329 -40.916 91.751 1.00152.61 C
ATOM 24 P G A 16 -11.354 -40.347 95.003 1.00165.91 P
ATOM 25 OP1 G A 16 -11.848 -38.949 95.053 1.00141.94 O
ATOM 26 OP2 G A 16 -11.289 -41.124 96.264 1.00 96.71 O
ATOM 27 O5' G A 16 -12.158 -41.166 93.901 1.00168.37 O
TER

ATOM 1 O3' G B 15 -9.867 -40.303 94.398 1.00218.11 O
ATOM 2 P G B 16 -11.354 -40.347 95.003 1.00165.91 P
ATOM 3 OP1 G B 16 -11.848 -38.949 95.053 1.00141.94 O
ATOM 4 OP2 G B 16 -11.289 -41.124 96.264 1.00 96.71 O
ATOM 5 O5' G B 16 -12.158 -41.166 93.901 1.00168.37 O
ATOM 6 C5' G B 16 -13.559 -40.983 93.728 1.00143.91 C
ATOM 7 C4' G B 16 -13.910 -40.727 92.283 1.00179.86 C
ATOM 8 O4' G B 16 -12.835 -41.223 91.445 1.00200.59 O
ATOM 9 C3' G B 16 -15.182 -41.407 91.796 1.00181.90 C
ATOM 10 O3' G B 16 -15.810 -40.593 90.807 1.00159.69 O
ATOM 11 C2' G B 16 -14.661 -42.692 91.160 1.00192.60 C
ATOM 12 O2' G B 16 -15.498 -43.229 90.157 1.00138.49 O
ATOM 13 C1' G B 16 -13.308 -42.252 90.596 1.00216.31 C
ATOM 14 N9 G B 16 -12.301 -43.316 90.592 1.00181.59 N
ATOM 15 C8 G B 16 -11.942 -44.071 91.682 1.00152.41 C
ATOM 16 N7 G B 16 -11.014 -44.948 91.421 1.00161.16 N
ATOM 17 C5 G B 16 -10.738 -44.759 90.074 1.00177.48 C
ATOM 18 C6 G B 16 -9.812 -45.426 89.232 1.00188.30 C
ATOM 19 O6 G B 16 -9.033 -46.343 89.520 1.00185.27 O
ATOM 20 N1 G B 16 -9.851 -44.925 87.936 1.00211.41 N
ATOM 21 C2 G B 16 -10.672 -43.913 87.504 1.00200.09 C
ATOM 22 N2 G B 16 -10.560 -43.571 86.213 1.00200.87 N
ATOM 23 N3 G B 16 -11.540 -43.281 88.279 1.00183.50 N
ATOM 24 C4 G B 16 -11.521 -43.752 89.544 1.00183.27 C
TER

Atoms:
OP1: (-7.096,-41.651,99.531)
OP2: (-4.753,-41.810,98.487)
C3': (-8.758,-40.733,95.185)
C1': (-7.078,-40.598,93.540)
C5': (-7.181,-39.544,96.827)
O6: (-2.240,-41.994,90.281)
O4': (-6.840,-39.528,94.432)
C8: (-4.816,-41.768,93.713)
C2: (-5.291,-40.285,89.630)
C6: (-3.356,-41.512,90.510)
C5: (-4.092,-41.519,91.724)
C4: (-5.329,-40.916,91.751)
P: (-6.062,-41.116,98.606)
C4': (-7.854,-39.535,95.476)
C2': (-7.859,-41.632,94.342)
O2': (-8.550,-42.534,93.503)
N1: (-4.051,-40.859,89.497)
N2: (-5.800,-39.700,88.536)
N3: (-5.985,-40.286,90.755)
N7: (-3.782,-42.052,92.968)
N9: (-5.789,-41.077,93.035)
O5': (-6.683,-40.834,97.165)
O3': (-9.867,-40.303,94.398)
OP1: (-11.848,-38.949,95.053)
OP2: (-11.289,-41.124,96.264)
C3': (-15.182,-41.407,91.796)
C1': (-13.308,-42.252,90.596)
C5': (-13.559,-40.983,93.728)
O6: (-9.033,-46.343,89.520)
O4': (-12.835,-41.223,91.445)
C8: (-11.942,-44.071,91.682)
C2: (-10.672,-43.913,87.504)
C6: (-9.812,-45.426,89.232)
C5: (-10.738,-44.759,90.074)
C4: (-11.521,-43.752,89.544)
P: (-11.354,-40.347,95.003)
C4': (-13.910,-40.727,92.283)
C2': (-14.661,-42.692,91.160)
O2': (-15.498,-43.229,90.157)
N1: (-9.851,-44.925,87.936)
N2: (-10.560,-43.571,86.213)
N3: (-11.540,-43.281,88.279)
N7: (-11.014,-44.948,91.421)
N9: (-12.301,-43.316,90.592)
O5': (-12.158,-41.166,93.901)
O3': (-15.810,-40.593,90.807)
Image (generated by PyMOL):
PyMOL image
show in jmol