ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A1871:A1868

Extra

PDB:
ATOM 1 O3' A A1870 -48.364 209.245 127.855 1.00 96.82 O
ATOM 2 P A A1871 -47.622 207.953 127.270 1.00121.02 P
ATOM 3 OP1 A A1871 -48.224 207.638 125.958 1.00109.63 O
ATOM 4 OP2 A A1871 -47.590 206.922 128.328 1.00108.49 O
ATOM 5 O5' A A1871 -46.134 208.484 127.013 1.00102.14 O
ATOM 6 C5' A A1871 -45.876 209.317 125.883 1.00 97.37 C
ATOM 7 C4' A A1871 -44.384 209.525 125.700 1.00101.82 C
ATOM 8 O4' A A1871 -43.901 210.503 126.654 1.00100.86 O
ATOM 9 C3' A A1871 -43.528 208.284 125.918 1.00 94.54 C
ATOM 10 O3' A A1871 -43.383 207.587 124.697 1.00100.31 O
ATOM 11 C2' A A1871 -42.195 208.892 126.316 1.00 96.71 C
ATOM 12 O2' A A1871 -41.453 209.289 125.173 1.00 95.64 O
ATOM 13 C1' A A1871 -42.649 210.083 127.158 1.00 99.45 C
ATOM 14 N9 A A1871 -42.870 209.744 128.554 1.00 99.50 N
ATOM 15 C8 A A1871 -44.077 209.487 129.127 1.00 97.57 C
ATOM 16 N7 A A1871 -44.007 209.208 130.404 1.00 97.45 N
ATOM 17 C5 A A1871 -42.657 209.284 130.690 1.00 98.19 C
ATOM 18 C6 A A1871 -41.934 209.090 131.883 1.00 97.58 C
ATOM 19 N6 A A1871 -42.514 208.765 133.042 1.00 82.14 N
ATOM 20 N1 A A1871 -40.593 209.240 131.831 1.00104.27 N
ATOM 21 C2 A A1871 -40.028 209.563 130.659 1.00102.90 C
ATOM 22 N3 A A1871 -40.603 209.774 129.471 1.00 98.53 N
ATOM 23 C4 A A1871 -41.935 209.615 129.557 1.00 99.85 C
ATOM 24 P G A1872 -42.914 206.055 124.687 1.00102.92 P
ATOM 25 OP1 G A1872 -41.805 205.943 123.710 1.00 84.88 O
ATOM 26 OP2 G A1872 -44.135 205.243 124.509 1.00 87.87 O
ATOM 27 O5' G A1872 -42.368 205.771 126.172 1.00 89.66 O
TER

ATOM 1 O3' U B1867 -49.771 203.734 139.808 1.00 65.12 O
ATOM 2 P G B1868 -50.811 204.955 139.851 1.00 55.20 P
ATOM 3 OP1 G B1868 -50.841 205.447 141.256 1.00 54.14 O
ATOM 4 OP2 G B1868 -52.075 204.536 139.187 1.00 73.29 O
ATOM 5 O5' G B1868 -50.085 206.007 138.878 1.00 57.93 O
ATOM 6 C5' G B1868 -48.846 206.587 139.273 1.00 66.27 C
ATOM 7 C4' G B1868 -48.117 207.250 138.117 1.00 66.79 C
ATOM 8 O4' G B1868 -47.676 206.261 137.155 1.00 66.44 O
ATOM 9 C3' G B1868 -48.922 208.215 137.256 1.00 77.90 C
ATOM 10 O3' G B1868 -49.151 209.452 137.926 1.00 81.05 O
ATOM 11 C2' G B1868 -47.964 208.360 136.073 1.00 79.49 C
ATOM 12 O2' G B1868 -46.931 209.308 136.292 1.00 80.04 O
ATOM 13 C1' G B1868 -47.413 206.932 135.940 1.00 67.59 C
ATOM 14 N9 G B1868 -48.088 206.213 134.870 1.00 67.07 N
ATOM 15 C8 G B1868 -49.225 205.449 134.962 1.00 66.03 C
ATOM 16 N7 G B1868 -49.605 204.943 133.820 1.00 62.26 N
ATOM 17 C5 G B1868 -48.663 205.407 132.917 1.00 66.10 C
ATOM 18 C6 G B1868 -48.556 205.187 131.527 1.00 74.75 C
ATOM 19 O6 G B1868 -49.297 204.512 130.800 1.00 81.94 O
ATOM 20 N1 G B1868 -47.446 205.847 130.997 1.00 81.80 N
ATOM 21 C2 G B1868 -46.555 206.620 131.720 1.00 77.97 C
ATOM 22 N2 G B1868 -45.543 207.181 131.039 1.00 77.26 N
ATOM 23 N3 G B1868 -46.647 206.832 133.026 1.00 71.79 N
ATOM 24 C4 G B1868 -47.723 206.195 133.548 1.00 71.49 C
ATOM 25 P C B1869 -50.635 210.035 137.997 1.00 97.14 P
ATOM 26 OP1 C B1869 -50.712 210.915 139.188 1.00 85.43 O
ATOM 27 OP2 C B1869 -51.594 208.914 137.859 1.00 78.78 O
ATOM 28 O5' C B1869 -50.702 210.899 136.651 1.00 93.16 O
TER

Atoms:
OP1: (-48.224,207.638,125.958)
OP2: (-47.590,206.922,128.328)
C3': (-43.528,208.284,125.918)
C1': (-42.649,210.083,127.158)
C5': (-45.876,209.317,125.883)
O4': (-43.901,210.503,126.654)
C8: (-44.077,209.487,129.127)
O2': (-41.453,209.289,125.173)
C6: (-41.934,209.090,131.883)
C5: (-42.657,209.284,130.690)
C4: (-41.935,209.615,129.557)
P: (-47.622,207.953,127.270)
C4': (-44.384,209.525,125.700)
C2': (-42.195,208.892,126.316)
C2: (-40.028,209.563,130.659)
N1: (-40.593,209.240,131.831)
N3: (-40.603,209.774,129.471)
N6: (-42.514,208.765,133.042)
N7: (-44.007,209.208,130.404)
N9: (-42.870,209.744,128.554)
O5': (-46.134,208.484,127.013)
O3': (-43.383,207.587,124.697)
OP1: (-50.841,205.447,141.256)
OP2: (-52.075,204.536,139.187)
C3': (-48.922,208.215,137.256)
C1': (-47.413,206.932,135.940)
C5': (-48.846,206.587,139.273)
O6: (-49.297,204.512,130.800)
O4': (-47.676,206.261,137.155)
C8: (-49.225,205.449,134.962)
C2: (-46.555,206.620,131.720)
C6: (-48.556,205.187,131.527)
C5: (-48.663,205.407,132.917)
C4: (-47.723,206.195,133.548)
P: (-50.811,204.955,139.851)
C4': (-48.117,207.250,138.117)
C2': (-47.964,208.360,136.073)
O2': (-46.931,209.308,136.292)
N1: (-47.446,205.847,130.997)
N2: (-45.543,207.181,131.039)
N3: (-46.647,206.832,133.026)
N7: (-49.605,204.943,133.820)
N9: (-48.088,206.213,134.870)
O5': (-50.085,206.007,138.878)
O3': (-49.151,209.452,137.926)
Image (generated by PyMOL):
PyMOL image
show in jmol