Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12967:12968
Extra
PDB:
ATOM 1 O3' U A2966 90.948 33.276 4.069 1.00 59.38 O
ATOM 2 P A A2967 92.334 33.797 3.396 1.00 52.00 P
ATOM 3 OP1 A A2967 93.265 34.092 4.532 1.00 51.84 O
ATOM 4 OP2 A A2967 92.001 34.886 2.439 1.00 52.53 O
ATOM 5 O5' A A2967 92.869 32.529 2.609 1.00 52.08 O
ATOM 6 C5' A A2967 92.917 31.256 3.247 1.00 51.59 C
ATOM 7 C4' A A2967 94.321 30.745 3.394 1.00 51.68 C
ATOM 8 O4' A A2967 94.873 30.468 2.087 1.00 52.17 O
ATOM 9 C3' A A2967 95.276 31.689 4.050 1.00 51.82 C
ATOM 10 O3' A A2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 11 C2' A A2967 95.846 32.447 2.851 1.00 52.50 C
ATOM 12 O2' A A2967 97.099 33.080 3.048 1.00 52.80 O
ATOM 13 C1' A A2967 95.927 31.353 1.810 1.00 52.64 C
ATOM 14 N9 A A2967 95.729 31.858 0.483 1.00 53.18 N
ATOM 15 C8 A A2967 94.535 32.142 -0.131 1.00 53.25 C
ATOM 16 N7 A A2967 94.690 32.646 -1.341 1.00 53.83 N
ATOM 17 C5 A A2967 96.078 32.702 -1.471 1.00 54.13 C
ATOM 18 C6 A A2967 96.894 33.132 -2.504 1.00 54.76 C
ATOM 19 N6 A A2967 96.412 33.612 -3.656 1.00 55.21 N
ATOM 20 N1 A A2967 98.230 33.037 -2.292 1.00 54.91 N
ATOM 21 C2 A A2967 98.701 32.549 -1.143 1.00 54.46 C
ATOM 22 N3 A A2967 98.028 32.112 -0.091 1.00 53.86 N
ATOM 23 C4 A A2967 96.722 32.214 -0.348 1.00 53.73 C
ATOM 24 P G A2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 25 OP1 G A2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 26 OP2 G A2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 27 O5' G A2968 97.968 32.166 5.964 1.00 51.66 O
TER
ATOM 1 O3' A B2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 2 P G B2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 3 OP1 G B2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 4 OP2 G B2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 5 O5' G B2968 97.968 32.166 5.964 1.00 51.66 O
ATOM 6 C5' G B2968 99.283 31.673 5.738 1.00 51.89 C
ATOM 7 C4' G B2968 100.305 32.788 5.805 1.00 52.31 C
ATOM 8 O4' G B2968 100.028 33.764 4.766 1.00 52.81 O
ATOM 9 C3' G B2968 100.326 33.582 7.113 1.00 52.08 C
ATOM 10 O3' G B2968 101.626 34.081 7.342 1.00 52.39 O
ATOM 11 C2' G B2968 99.459 34.777 6.783 1.00 52.28 C
ATOM 12 O2' G B2968 99.710 35.907 7.582 1.00 52.35 O
ATOM 13 C1' G B2968 99.865 35.040 5.357 1.00 52.88 C
ATOM 14 N9 G B2968 98.865 35.790 4.624 1.00 53.09 N
ATOM 15 C8 G B2968 97.543 35.612 4.727 1.00 52.76 C
ATOM 16 N7 G B2968 96.895 36.454 4.000 1.00 53.08 N
ATOM 17 C5 G B2968 97.822 37.235 3.410 1.00 53.65 C
ATOM 18 C6 G B2968 97.677 38.306 2.524 1.00 54.19 C
ATOM 19 O6 G B2968 96.625 38.764 2.080 1.00 54.26 O
ATOM 20 N1 G B2968 98.897 38.861 2.146 1.00 54.69 N
ATOM 21 C2 G B2968 100.092 38.386 2.598 1.00 54.65 C
ATOM 22 N2 G B2968 101.196 38.981 2.153 1.00 55.17 N
ATOM 23 N3 G B2968 100.232 37.373 3.432 1.00 54.14 N
ATOM 24 C4 G B2968 99.052 36.855 3.803 1.00 53.66 C
ATOM 25 P C B2969 102.767 33.200 7.998 1.00 58.26 P
ATOM 26 OP1 C B2969 103.970 33.442 7.172 1.00 58.83 O
ATOM 27 OP2 C B2969 102.275 31.820 8.144 1.00 57.81 O
ATOM 28 O5' C B2969 102.944 33.883 9.411 1.00 58.03 O
TER
ATOM 2 P A A2967 92.334 33.797 3.396 1.00 52.00 P
ATOM 3 OP1 A A2967 93.265 34.092 4.532 1.00 51.84 O
ATOM 4 OP2 A A2967 92.001 34.886 2.439 1.00 52.53 O
ATOM 5 O5' A A2967 92.869 32.529 2.609 1.00 52.08 O
ATOM 6 C5' A A2967 92.917 31.256 3.247 1.00 51.59 C
ATOM 7 C4' A A2967 94.321 30.745 3.394 1.00 51.68 C
ATOM 8 O4' A A2967 94.873 30.468 2.087 1.00 52.17 O
ATOM 9 C3' A A2967 95.276 31.689 4.050 1.00 51.82 C
ATOM 10 O3' A A2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 11 C2' A A2967 95.846 32.447 2.851 1.00 52.50 C
ATOM 12 O2' A A2967 97.099 33.080 3.048 1.00 52.80 O
ATOM 13 C1' A A2967 95.927 31.353 1.810 1.00 52.64 C
ATOM 14 N9 A A2967 95.729 31.858 0.483 1.00 53.18 N
ATOM 15 C8 A A2967 94.535 32.142 -0.131 1.00 53.25 C
ATOM 16 N7 A A2967 94.690 32.646 -1.341 1.00 53.83 N
ATOM 17 C5 A A2967 96.078 32.702 -1.471 1.00 54.13 C
ATOM 18 C6 A A2967 96.894 33.132 -2.504 1.00 54.76 C
ATOM 19 N6 A A2967 96.412 33.612 -3.656 1.00 55.21 N
ATOM 20 N1 A A2967 98.230 33.037 -2.292 1.00 54.91 N
ATOM 21 C2 A A2967 98.701 32.549 -1.143 1.00 54.46 C
ATOM 22 N3 A A2967 98.028 32.112 -0.091 1.00 53.86 N
ATOM 23 C4 A A2967 96.722 32.214 -0.348 1.00 53.73 C
ATOM 24 P G A2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 25 OP1 G A2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 26 OP2 G A2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 27 O5' G A2968 97.968 32.166 5.964 1.00 51.66 O
TER
ATOM 1 O3' A B2967 96.281 30.915 4.648 1.00 51.64 O
ATOM 2 P G B2968 96.723 31.194 6.143 1.00 51.16 P
ATOM 3 OP1 G B2968 97.148 29.898 6.686 1.00 50.80 O
ATOM 4 OP2 G B2968 95.629 31.920 6.814 1.00 50.89 O
ATOM 5 O5' G B2968 97.968 32.166 5.964 1.00 51.66 O
ATOM 6 C5' G B2968 99.283 31.673 5.738 1.00 51.89 C
ATOM 7 C4' G B2968 100.305 32.788 5.805 1.00 52.31 C
ATOM 8 O4' G B2968 100.028 33.764 4.766 1.00 52.81 O
ATOM 9 C3' G B2968 100.326 33.582 7.113 1.00 52.08 C
ATOM 10 O3' G B2968 101.626 34.081 7.342 1.00 52.39 O
ATOM 11 C2' G B2968 99.459 34.777 6.783 1.00 52.28 C
ATOM 12 O2' G B2968 99.710 35.907 7.582 1.00 52.35 O
ATOM 13 C1' G B2968 99.865 35.040 5.357 1.00 52.88 C
ATOM 14 N9 G B2968 98.865 35.790 4.624 1.00 53.09 N
ATOM 15 C8 G B2968 97.543 35.612 4.727 1.00 52.76 C
ATOM 16 N7 G B2968 96.895 36.454 4.000 1.00 53.08 N
ATOM 17 C5 G B2968 97.822 37.235 3.410 1.00 53.65 C
ATOM 18 C6 G B2968 97.677 38.306 2.524 1.00 54.19 C
ATOM 19 O6 G B2968 96.625 38.764 2.080 1.00 54.26 O
ATOM 20 N1 G B2968 98.897 38.861 2.146 1.00 54.69 N
ATOM 21 C2 G B2968 100.092 38.386 2.598 1.00 54.65 C
ATOM 22 N2 G B2968 101.196 38.981 2.153 1.00 55.17 N
ATOM 23 N3 G B2968 100.232 37.373 3.432 1.00 54.14 N
ATOM 24 C4 G B2968 99.052 36.855 3.803 1.00 53.66 C
ATOM 25 P C B2969 102.767 33.200 7.998 1.00 58.26 P
ATOM 26 OP1 C B2969 103.970 33.442 7.172 1.00 58.83 O
ATOM 27 OP2 C B2969 102.275 31.820 8.144 1.00 57.81 O
ATOM 28 O5' C B2969 102.944 33.883 9.411 1.00 58.03 O
TER
Atoms:
OP1: (93.265,34.092,4.532)
OP2: (92.001,34.886,2.439)
C3': (95.276,31.689,4.050)
C1': (95.927,31.353,1.810)
C5': (92.917,31.256,3.247)
O4': (94.873,30.468,2.087)
C8: (94.535,32.142,-0.131)
O2': (97.099,33.080,3.048)
C6: (96.894,33.132,-2.504)
C5: (96.078,32.702,-1.471)
C4: (96.722,32.214,-0.348)
P: (92.334,33.797,3.396)
C4': (94.321,30.745,3.394)
C2': (95.846,32.447,2.851)
C2: (98.701,32.549,-1.143)
N1: (98.230,33.037,-2.292)
N3: (98.028,32.112,-0.091)
N6: (96.412,33.612,-3.656)
N7: (94.690,32.646,-1.341)
N9: (95.729,31.858,0.483)
O5': (92.869,32.529,2.609)
O3': (96.281,30.915,4.648)
OP2: (92.001,34.886,2.439)
C3': (95.276,31.689,4.050)
C1': (95.927,31.353,1.810)
C5': (92.917,31.256,3.247)
O4': (94.873,30.468,2.087)
C8: (94.535,32.142,-0.131)
O2': (97.099,33.080,3.048)
C6: (96.894,33.132,-2.504)
C5: (96.078,32.702,-1.471)
C4: (96.722,32.214,-0.348)
P: (92.334,33.797,3.396)
C4': (94.321,30.745,3.394)
C2': (95.846,32.447,2.851)
C2: (98.701,32.549,-1.143)
N1: (98.230,33.037,-2.292)
N3: (98.028,32.112,-0.091)
N6: (96.412,33.612,-3.656)
N7: (94.690,32.646,-1.341)
N9: (95.729,31.858,0.483)
O5': (92.869,32.529,2.609)
O3': (96.281,30.915,4.648)
OP1: (97.148,29.898,6.686)
OP2: (95.629,31.920,6.814)
C3': (100.326,33.582,7.113)
C1': (99.865,35.040,5.357)
C5': (99.283,31.673,5.738)
O6: (96.625,38.764,2.080)
O4': (100.028,33.764,4.766)
C8: (97.543,35.612,4.727)
C2: (100.092,38.386,2.598)
C6: (97.677,38.306,2.524)
C5: (97.822,37.235,3.410)
C4: (99.052,36.855,3.803)
P: (96.723,31.194,6.143)
C4': (100.305,32.788,5.805)
C2': (99.459,34.777,6.783)
O2': (99.710,35.907,7.582)
N1: (98.897,38.861,2.146)
N2: (101.196,38.981,2.153)
N3: (100.232,37.373,3.432)
N7: (96.895,36.454,4.000)
N9: (98.865,35.790,4.624)
O5': (97.968,32.166,5.964)
O3': (101.626,34.081,7.342)
OP2: (95.629,31.920,6.814)
C3': (100.326,33.582,7.113)
C1': (99.865,35.040,5.357)
C5': (99.283,31.673,5.738)
O6: (96.625,38.764,2.080)
O4': (100.028,33.764,4.766)
C8: (97.543,35.612,4.727)
C2: (100.092,38.386,2.598)
C6: (97.677,38.306,2.524)
C5: (97.822,37.235,3.410)
C4: (99.052,36.855,3.803)
P: (96.723,31.194,6.143)
C4': (100.305,32.788,5.805)
C2': (99.459,34.777,6.783)
O2': (99.710,35.907,7.582)
N1: (98.897,38.861,2.146)
N2: (101.196,38.981,2.153)
N3: (100.232,37.373,3.432)
N7: (96.895,36.454,4.000)
N9: (98.865,35.790,4.624)
O5': (97.968,32.166,5.964)
O3': (101.626,34.081,7.342)
Image (generated by PyMOL):