Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A939:A940
Extra
PDB:
ATOM 1 O3' A A 938 52.186 58.844 96.344 1.00 46.35 O
ATOM 2 P G A 939 52.870 58.650 97.784 1.00 49.81 P
ATOM 3 OP1 G A 939 54.292 58.226 97.613 1.00 49.94 O
ATOM 4 OP2 G A 939 51.957 57.841 98.621 1.00 48.97 O
ATOM 5 O5' G A 939 52.882 60.121 98.363 1.00 48.80 O
ATOM 6 C5' G A 939 53.183 61.211 97.515 1.00 47.95 C
ATOM 7 C4' G A 939 53.026 62.481 98.277 1.00 47.82 C
ATOM 8 O4' G A 939 51.611 62.741 98.498 1.00 47.92 O
ATOM 9 C3' G A 939 53.683 62.446 99.645 1.00 47.76 C
ATOM 10 O3' G A 939 54.407 63.637 99.817 1.00 46.78 O
ATOM 11 C2' G A 939 52.495 62.320 100.601 1.00 47.46 C
ATOM 12 O2' G A 939 52.740 62.899 101.863 1.00 47.82 O
ATOM 13 C1' G A 939 51.393 63.064 99.847 1.00 47.58 C
ATOM 14 N9 G A 939 50.049 62.620 100.212 1.00 48.49 N
ATOM 15 C8 G A 939 49.601 61.324 100.282 1.00 49.30 C
ATOM 16 N7 G A 939 48.390 61.224 100.759 1.00 49.61 N
ATOM 17 C5 G A 939 48.001 62.536 100.982 1.00 48.84 C
ATOM 18 C6 G A 939 46.802 63.063 101.527 1.00 49.67 C
ATOM 19 O6 G A 939 45.811 62.460 101.950 1.00 50.85 O
ATOM 20 N1 G A 939 46.835 64.449 101.583 1.00 50.21 N
ATOM 21 C2 G A 939 47.885 65.231 101.190 1.00 49.79 C
ATOM 22 N2 G A 939 47.719 66.558 101.357 1.00 50.34 N
ATOM 23 N3 G A 939 49.010 64.755 100.685 1.00 48.60 N
ATOM 24 C4 G A 939 49.002 63.411 100.617 1.00 48.43 C
ATOM 25 P G A 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 26 OP1 G A 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 27 OP2 G A 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 28 O5' G A 940 55.905 64.655 101.453 1.00 47.85 O
TER
ATOM 1 O3' G B 939 54.407 63.637 99.817 1.00 46.78 O
ATOM 2 P G B 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 3 OP1 G B 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 4 OP2 G B 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 5 O5' G B 940 55.905 64.655 101.453 1.00 47.85 O
ATOM 6 C5' G B 940 56.918 64.707 102.450 1.00 49.76 C
ATOM 7 C4' G B 940 56.351 65.216 103.757 1.00 49.70 C
ATOM 8 O4' G B 940 55.099 64.546 104.050 1.00 50.29 O
ATOM 9 C3' G B 940 57.261 64.906 104.933 1.00 51.55 C
ATOM 10 O3' G B 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 11 C2' G B 940 56.791 63.499 105.312 1.00 51.70 C
ATOM 12 O2' G B 940 57.143 63.098 106.622 1.00 54.36 O
ATOM 13 C1' G B 940 55.275 63.638 105.125 1.00 51.33 C
ATOM 14 N9 G B 940 54.546 62.417 104.785 1.00 52.28 N
ATOM 15 C8 G B 940 54.885 61.501 103.822 1.00 53.22 C
ATOM 16 N7 G B 940 54.021 60.533 103.706 1.00 54.21 N
ATOM 17 C5 G B 940 53.054 60.816 104.660 1.00 54.32 C
ATOM 18 C6 G B 940 51.857 60.116 105.003 1.00 55.61 C
ATOM 19 O6 G B 940 51.394 59.075 104.504 1.00 56.42 O
ATOM 20 N1 G B 940 51.174 60.749 106.038 1.00 55.48 N
ATOM 21 C2 G B 940 51.578 61.902 106.662 1.00 54.89 C
ATOM 22 N2 G B 940 50.785 62.336 107.665 1.00 55.07 N
ATOM 23 N3 G B 940 52.677 62.571 106.339 1.00 54.43 N
ATOM 24 C4 G B 940 53.365 61.972 105.342 1.00 53.25 C
ATOM 25 P U B 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 26 OP1 U B 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 27 OP2 U B 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 28 O5' U B 941 56.582 68.286 106.407 1.00 47.22 O
TER
ATOM 2 P G A 939 52.870 58.650 97.784 1.00 49.81 P
ATOM 3 OP1 G A 939 54.292 58.226 97.613 1.00 49.94 O
ATOM 4 OP2 G A 939 51.957 57.841 98.621 1.00 48.97 O
ATOM 5 O5' G A 939 52.882 60.121 98.363 1.00 48.80 O
ATOM 6 C5' G A 939 53.183 61.211 97.515 1.00 47.95 C
ATOM 7 C4' G A 939 53.026 62.481 98.277 1.00 47.82 C
ATOM 8 O4' G A 939 51.611 62.741 98.498 1.00 47.92 O
ATOM 9 C3' G A 939 53.683 62.446 99.645 1.00 47.76 C
ATOM 10 O3' G A 939 54.407 63.637 99.817 1.00 46.78 O
ATOM 11 C2' G A 939 52.495 62.320 100.601 1.00 47.46 C
ATOM 12 O2' G A 939 52.740 62.899 101.863 1.00 47.82 O
ATOM 13 C1' G A 939 51.393 63.064 99.847 1.00 47.58 C
ATOM 14 N9 G A 939 50.049 62.620 100.212 1.00 48.49 N
ATOM 15 C8 G A 939 49.601 61.324 100.282 1.00 49.30 C
ATOM 16 N7 G A 939 48.390 61.224 100.759 1.00 49.61 N
ATOM 17 C5 G A 939 48.001 62.536 100.982 1.00 48.84 C
ATOM 18 C6 G A 939 46.802 63.063 101.527 1.00 49.67 C
ATOM 19 O6 G A 939 45.811 62.460 101.950 1.00 50.85 O
ATOM 20 N1 G A 939 46.835 64.449 101.583 1.00 50.21 N
ATOM 21 C2 G A 939 47.885 65.231 101.190 1.00 49.79 C
ATOM 22 N2 G A 939 47.719 66.558 101.357 1.00 50.34 N
ATOM 23 N3 G A 939 49.010 64.755 100.685 1.00 48.60 N
ATOM 24 C4 G A 939 49.002 63.411 100.617 1.00 48.43 C
ATOM 25 P G A 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 26 OP1 G A 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 27 OP2 G A 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 28 O5' G A 940 55.905 64.655 101.453 1.00 47.85 O
TER
ATOM 1 O3' G B 939 54.407 63.637 99.817 1.00 46.78 O
ATOM 2 P G B 940 55.940 63.579 100.280 1.00 46.44 P
ATOM 3 OP1 G B 940 56.703 64.112 99.125 1.00 46.67 O
ATOM 4 OP2 G B 940 56.336 62.268 100.864 1.00 45.08 O
ATOM 5 O5' G B 940 55.905 64.655 101.453 1.00 47.85 O
ATOM 6 C5' G B 940 56.918 64.707 102.450 1.00 49.76 C
ATOM 7 C4' G B 940 56.351 65.216 103.757 1.00 49.70 C
ATOM 8 O4' G B 940 55.099 64.546 104.050 1.00 50.29 O
ATOM 9 C3' G B 940 57.261 64.906 104.933 1.00 51.55 C
ATOM 10 O3' G B 940 56.996 65.854 105.972 1.00 51.44 O
ATOM 11 C2' G B 940 56.791 63.499 105.312 1.00 51.70 C
ATOM 12 O2' G B 940 57.143 63.098 106.622 1.00 54.36 O
ATOM 13 C1' G B 940 55.275 63.638 105.125 1.00 51.33 C
ATOM 14 N9 G B 940 54.546 62.417 104.785 1.00 52.28 N
ATOM 15 C8 G B 940 54.885 61.501 103.822 1.00 53.22 C
ATOM 16 N7 G B 940 54.021 60.533 103.706 1.00 54.21 N
ATOM 17 C5 G B 940 53.054 60.816 104.660 1.00 54.32 C
ATOM 18 C6 G B 940 51.857 60.116 105.003 1.00 55.61 C
ATOM 19 O6 G B 940 51.394 59.075 104.504 1.00 56.42 O
ATOM 20 N1 G B 940 51.174 60.749 106.038 1.00 55.48 N
ATOM 21 C2 G B 940 51.578 61.902 106.662 1.00 54.89 C
ATOM 22 N2 G B 940 50.785 62.336 107.665 1.00 55.07 N
ATOM 23 N3 G B 940 52.677 62.571 106.339 1.00 54.43 N
ATOM 24 C4 G B 940 53.365 61.972 105.342 1.00 53.25 C
ATOM 25 P U B 941 57.743 67.288 105.989 1.00 50.85 P
ATOM 26 OP1 U B 941 58.175 67.687 104.625 1.00 47.24 O
ATOM 27 OP2 U B 941 58.733 67.316 107.108 1.00 49.91 O
ATOM 28 O5' U B 941 56.582 68.286 106.407 1.00 47.22 O
TER
Atoms:
OP1: (54.292,58.226,97.613)
OP2: (51.957,57.841,98.621)
C3': (53.683,62.446,99.645)
C1': (51.393,63.064,99.847)
C5': (53.183,61.211,97.515)
O6: (45.811,62.460,101.950)
O4': (51.611,62.741,98.498)
C8: (49.601,61.324,100.282)
C2: (47.885,65.231,101.190)
C6: (46.802,63.063,101.527)
C5: (48.001,62.536,100.982)
C4: (49.002,63.411,100.617)
P: (52.870,58.650,97.784)
C4': (53.026,62.481,98.277)
C2': (52.495,62.320,100.601)
O2': (52.740,62.899,101.863)
N1: (46.835,64.449,101.583)
N2: (47.719,66.558,101.357)
N3: (49.010,64.755,100.685)
N7: (48.390,61.224,100.759)
N9: (50.049,62.620,100.212)
O5': (52.882,60.121,98.363)
O3': (54.407,63.637,99.817)
OP2: (51.957,57.841,98.621)
C3': (53.683,62.446,99.645)
C1': (51.393,63.064,99.847)
C5': (53.183,61.211,97.515)
O6: (45.811,62.460,101.950)
O4': (51.611,62.741,98.498)
C8: (49.601,61.324,100.282)
C2: (47.885,65.231,101.190)
C6: (46.802,63.063,101.527)
C5: (48.001,62.536,100.982)
C4: (49.002,63.411,100.617)
P: (52.870,58.650,97.784)
C4': (53.026,62.481,98.277)
C2': (52.495,62.320,100.601)
O2': (52.740,62.899,101.863)
N1: (46.835,64.449,101.583)
N2: (47.719,66.558,101.357)
N3: (49.010,64.755,100.685)
N7: (48.390,61.224,100.759)
N9: (50.049,62.620,100.212)
O5': (52.882,60.121,98.363)
O3': (54.407,63.637,99.817)
OP1: (56.703,64.112,99.125)
OP2: (56.336,62.268,100.864)
C3': (57.261,64.906,104.933)
C1': (55.275,63.638,105.125)
C5': (56.918,64.707,102.450)
O6: (51.394,59.075,104.504)
O4': (55.099,64.546,104.050)
C8: (54.885,61.501,103.822)
C2: (51.578,61.902,106.662)
C6: (51.857,60.116,105.003)
C5: (53.054,60.816,104.660)
C4: (53.365,61.972,105.342)
P: (55.940,63.579,100.280)
C4': (56.351,65.216,103.757)
C2': (56.791,63.499,105.312)
O2': (57.143,63.098,106.622)
N1: (51.174,60.749,106.038)
N2: (50.785,62.336,107.665)
N3: (52.677,62.571,106.339)
N7: (54.021,60.533,103.706)
N9: (54.546,62.417,104.785)
O5': (55.905,64.655,101.453)
O3': (56.996,65.854,105.972)
OP2: (56.336,62.268,100.864)
C3': (57.261,64.906,104.933)
C1': (55.275,63.638,105.125)
C5': (56.918,64.707,102.450)
O6: (51.394,59.075,104.504)
O4': (55.099,64.546,104.050)
C8: (54.885,61.501,103.822)
C2: (51.578,61.902,106.662)
C6: (51.857,60.116,105.003)
C5: (53.054,60.816,104.660)
C4: (53.365,61.972,105.342)
P: (55.940,63.579,100.280)
C4': (56.351,65.216,103.757)
C2': (56.791,63.499,105.312)
O2': (57.143,63.098,106.622)
N1: (51.174,60.749,106.038)
N2: (50.785,62.336,107.665)
N3: (52.677,62.571,106.339)
N7: (54.021,60.533,103.706)
N9: (54.546,62.417,104.785)
O5': (55.905,64.655,101.453)
O3': (56.996,65.854,105.972)
Image (generated by PyMOL):