ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A973:B100

Extra

PDB:
ATOM 1 O3' A A 972 43.747 63.171 109.055 1.00 42.41 O
ATOM 2 P A A 973 42.992 63.454 107.674 1.00 44.49 P
ATOM 3 OP1 A A 973 41.888 62.474 107.662 1.00 42.77 O
ATOM 4 OP2 A A 973 43.958 63.467 106.553 1.00 44.44 O
ATOM 5 O5' A A 973 42.423 64.933 107.866 1.00 43.12 O
ATOM 6 C5' A A 973 41.559 65.242 108.980 1.00 42.59 C
ATOM 7 C4' A A 973 41.615 66.715 109.334 1.00 42.78 C
ATOM 8 O4' A A 973 42.912 67.059 109.881 1.00 43.98 O
ATOM 9 C3' A A 973 41.396 67.719 108.214 1.00 42.79 C
ATOM 10 O3' A A 973 40.012 67.932 107.991 1.00 45.27 O
ATOM 11 C2' A A 973 42.008 68.971 108.825 1.00 43.60 C
ATOM 12 O2' A A 973 41.176 69.559 109.807 1.00 41.28 O
ATOM 13 C1' A A 973 43.247 68.381 109.495 1.00 43.65 C
ATOM 14 N9 A A 973 44.325 68.315 108.509 1.00 42.96 N
ATOM 15 C8 A A 973 44.799 67.239 107.804 1.00 44.22 C
ATOM 16 N7 A A 973 45.746 67.540 106.955 1.00 43.39 N
ATOM 17 C5 A A 973 45.918 68.901 107.122 1.00 43.04 C
ATOM 18 C6 A A 973 46.784 69.827 106.505 1.00 43.11 C
ATOM 19 N6 A A 973 47.667 69.495 105.559 1.00 42.46 N
ATOM 20 N1 A A 973 46.705 71.118 106.895 1.00 42.31 N
ATOM 21 C2 A A 973 45.806 71.438 107.834 1.00 43.03 C
ATOM 22 N3 A A 973 44.940 70.657 108.481 1.00 42.95 N
ATOM 23 C4 A A 973 45.053 69.388 108.076 1.00 42.48 C
ATOM 24 P C A 974 39.418 68.051 106.494 1.00 46.90 P
ATOM 25 OP1 C A 974 38.320 69.034 106.604 1.00 43.79 O
ATOM 26 OP2 C A 974 39.146 66.698 105.923 1.00 45.40 O
ATOM 27 O5' C A 974 40.556 68.753 105.639 1.00 44.32 O
TER

ATOM 1 O3' G B 99 31.423 66.846 110.360 1.00 43.65 O
ATOM 2 P G B 100 32.061 65.535 110.974 1.00 44.47 P
ATOM 3 OP1 G B 100 31.421 64.413 110.269 1.00 45.73 O
ATOM 4 OP2 G B 100 31.943 65.673 112.440 1.00 43.63 O
ATOM 5 O5' G B 100 33.599 65.638 110.591 1.00 46.78 O
ATOM 6 C5' G B 100 34.567 64.788 111.211 1.00 47.16 C
ATOM 7 C4' G B 100 35.929 65.056 110.631 1.00 48.94 C
ATOM 8 O4' G B 100 36.279 66.445 110.871 1.00 49.38 O
ATOM 9 C3' G B 100 37.048 64.270 111.280 1.00 48.46 C
ATOM 10 O3' G B 100 37.124 62.971 110.706 1.00 47.60 O
ATOM 11 C2' G B 100 38.255 65.146 110.975 1.00 48.45 C
ATOM 12 O2' G B 100 38.627 65.056 109.622 1.00 48.55 O
ATOM 13 C1' G B 100 37.659 66.540 111.161 1.00 48.78 C
ATOM 14 N9 G B 100 37.799 67.081 112.505 1.00 49.15 N
ATOM 15 C8 G B 100 36.795 67.339 113.412 1.00 50.08 C
ATOM 16 N7 G B 100 37.237 67.823 114.536 1.00 50.69 N
ATOM 17 C5 G B 100 38.616 67.881 114.358 1.00 50.65 C
ATOM 18 C6 G B 100 39.647 68.312 115.235 1.00 51.36 C
ATOM 19 O6 G B 100 39.557 68.733 116.396 1.00 51.18 O
ATOM 20 N1 G B 100 40.897 68.211 114.633 1.00 52.01 N
ATOM 21 C2 G B 100 41.132 67.750 113.360 1.00 52.34 C
ATOM 22 N2 G B 100 42.423 67.739 112.957 1.00 53.58 N
ATOM 23 N3 G B 100 40.184 67.337 112.544 1.00 50.87 N
ATOM 24 C4 G B 100 38.965 67.431 113.103 1.00 49.67 C
ATOM 25 P G B 101 37.430 61.705 111.645 1.00 49.97 P
ATOM 26 OP1 G B 101 37.817 60.554 110.776 1.00 49.83 O
ATOM 27 OP2 G B 101 36.296 61.558 112.587 1.00 49.56 O
ATOM 28 O5' G B 101 38.708 62.146 112.486 1.00 48.39 O
TER

Atoms:
OP1: (41.888,62.474,107.662)
OP2: (43.958,63.467,106.553)
C3': (41.396,67.719,108.214)
C1': (43.247,68.381,109.495)
C5': (41.559,65.242,108.980)
O4': (42.912,67.059,109.881)
C8: (44.799,67.239,107.804)
O2': (41.176,69.559,109.807)
C6: (46.784,69.827,106.505)
C5: (45.918,68.901,107.122)
C4: (45.053,69.388,108.076)
P: (42.992,63.454,107.674)
C4': (41.615,66.715,109.334)
C2': (42.008,68.971,108.825)
C2: (45.806,71.438,107.834)
N1: (46.705,71.118,106.895)
N3: (44.940,70.657,108.481)
N6: (47.667,69.495,105.559)
N7: (45.746,67.540,106.955)
N9: (44.325,68.315,108.509)
O5': (42.423,64.933,107.866)
O3': (40.012,67.932,107.991)
OP1: (31.421,64.413,110.269)
OP2: (31.943,65.673,112.440)
C3': (37.048,64.270,111.280)
C1': (37.659,66.540,111.161)
C5': (34.567,64.788,111.211)
O6: (39.557,68.733,116.396)
O4': (36.279,66.445,110.871)
C8: (36.795,67.339,113.412)
C2: (41.132,67.750,113.360)
C6: (39.647,68.312,115.235)
C5: (38.616,67.881,114.358)
C4: (38.965,67.431,113.103)
P: (32.061,65.535,110.974)
C4': (35.929,65.056,110.631)
C2': (38.255,65.146,110.975)
O2': (38.627,65.056,109.622)
N1: (40.897,68.211,114.633)
N2: (42.423,67.739,112.957)
N3: (40.184,67.337,112.544)
N7: (37.237,67.823,114.536)
N9: (37.799,67.081,112.505)
O5': (33.599,65.638,110.591)
O3': (37.124,62.971,110.706)
Image (generated by PyMOL):
PyMOL image
show in jmol