Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0939:0940
Extra
PDB:
ATOM 1 O3' A A 938 52.021 58.702 96.028 1.00 42.84 O
ATOM 2 P G A 939 52.693 58.563 97.479 1.00 45.87 P
ATOM 3 OP1 G A 939 54.132 58.192 97.344 1.00 44.49 O
ATOM 4 OP2 G A 939 51.789 57.739 98.330 1.00 44.39 O
ATOM 5 O5' G A 939 52.629 60.042 98.042 1.00 44.14 O
ATOM 6 C5' G A 939 53.116 61.127 97.257 1.00 43.49 C
ATOM 7 C4' G A 939 52.948 62.410 98.008 1.00 42.42 C
ATOM 8 O4' G A 939 51.527 62.665 98.184 1.00 40.11 O
ATOM 9 C3' G A 939 53.562 62.418 99.403 1.00 42.49 C
ATOM 10 O3' G A 939 54.229 63.635 99.629 1.00 44.80 O
ATOM 11 C2' G A 939 52.353 62.335 100.323 1.00 41.49 C
ATOM 12 O2' G A 939 52.570 62.993 101.556 1.00 42.70 O
ATOM 13 C1' G A 939 51.290 63.062 99.508 1.00 40.90 C
ATOM 14 N9 G A 939 49.943 62.649 99.885 1.00 42.88 N
ATOM 15 C8 G A 939 49.454 61.366 99.937 1.00 42.18 C
ATOM 16 N7 G A 939 48.241 61.302 100.412 1.00 43.17 N
ATOM 17 C5 G A 939 47.899 62.622 100.667 1.00 42.96 C
ATOM 18 C6 G A 939 46.716 63.174 101.216 1.00 44.07 C
ATOM 19 O6 G A 939 45.708 62.589 101.612 1.00 46.88 O
ATOM 20 N1 G A 939 46.784 64.557 101.295 1.00 44.50 N
ATOM 21 C2 G A 939 47.855 65.315 100.906 1.00 44.70 C
ATOM 22 N2 G A 939 47.723 66.639 101.063 1.00 44.20 N
ATOM 23 N3 G A 939 48.973 64.814 100.402 1.00 43.21 N
ATOM 24 C4 G A 939 48.926 63.469 100.316 1.00 42.80 C
ATOM 25 P G A 940 55.799 63.623 99.934 1.00 45.05 P
ATOM 26 OP1 G A 940 56.497 64.084 98.712 1.00 45.29 O
ATOM 27 OP2 G A 940 56.169 62.323 100.543 1.00 44.70 O
ATOM 28 O5' G A 940 55.939 64.754 101.036 1.00 46.89 O
TER
ATOM 1 O3' G B 939 54.229 63.635 99.629 1.00 44.80 O
ATOM 2 P G B 940 55.799 63.623 99.934 1.00 45.05 P
ATOM 3 OP1 G B 940 56.497 64.084 98.712 1.00 45.29 O
ATOM 4 OP2 G B 940 56.169 62.323 100.543 1.00 44.70 O
ATOM 5 O5' G B 940 55.939 64.754 101.036 1.00 46.89 O
ATOM 6 C5' G B 940 56.876 64.624 102.097 1.00 47.75 C
ATOM 7 C4' G B 940 56.250 65.084 103.385 1.00 48.33 C
ATOM 8 O4' G B 940 54.984 64.404 103.577 1.00 49.64 O
ATOM 9 C3' G B 940 57.080 64.775 104.615 1.00 48.63 C
ATOM 10 O3' G B 940 56.769 65.752 105.594 1.00 46.58 O
ATOM 11 C2' G B 940 56.545 63.407 105.021 1.00 49.22 C
ATOM 12 O2' G B 940 56.768 63.129 106.383 1.00 52.27 O
ATOM 13 C1' G B 940 55.056 63.573 104.717 1.00 49.87 C
ATOM 14 N9 G B 940 54.339 62.343 104.397 1.00 51.29 N
ATOM 15 C8 G B 940 54.667 61.426 103.429 1.00 52.33 C
ATOM 16 N7 G B 940 53.794 60.463 103.318 1.00 53.80 N
ATOM 17 C5 G B 940 52.839 60.750 104.285 1.00 53.65 C
ATOM 18 C6 G B 940 51.642 60.065 104.630 1.00 54.33 C
ATOM 19 O6 G B 940 51.171 59.034 104.130 1.00 55.37 O
ATOM 20 N1 G B 940 50.969 60.702 105.669 1.00 53.51 N
ATOM 21 C2 G B 940 51.387 61.848 106.293 1.00 51.28 C
ATOM 22 N2 G B 940 50.593 62.304 107.265 1.00 49.32 N
ATOM 23 N3 G B 940 52.497 62.497 105.983 1.00 51.66 N
ATOM 24 C4 G B 940 53.169 61.897 104.974 1.00 52.29 C
ATOM 25 P U B 941 57.532 67.163 105.586 1.00 45.65 P
ATOM 26 OP1 U B 941 57.851 67.532 104.180 1.00 43.89 O
ATOM 27 OP2 U B 941 58.620 67.116 106.594 1.00 45.07 O
ATOM 28 O5' U B 941 56.423 68.175 106.110 1.00 42.35 O
TER
ATOM 2 P G A 939 52.693 58.563 97.479 1.00 45.87 P
ATOM 3 OP1 G A 939 54.132 58.192 97.344 1.00 44.49 O
ATOM 4 OP2 G A 939 51.789 57.739 98.330 1.00 44.39 O
ATOM 5 O5' G A 939 52.629 60.042 98.042 1.00 44.14 O
ATOM 6 C5' G A 939 53.116 61.127 97.257 1.00 43.49 C
ATOM 7 C4' G A 939 52.948 62.410 98.008 1.00 42.42 C
ATOM 8 O4' G A 939 51.527 62.665 98.184 1.00 40.11 O
ATOM 9 C3' G A 939 53.562 62.418 99.403 1.00 42.49 C
ATOM 10 O3' G A 939 54.229 63.635 99.629 1.00 44.80 O
ATOM 11 C2' G A 939 52.353 62.335 100.323 1.00 41.49 C
ATOM 12 O2' G A 939 52.570 62.993 101.556 1.00 42.70 O
ATOM 13 C1' G A 939 51.290 63.062 99.508 1.00 40.90 C
ATOM 14 N9 G A 939 49.943 62.649 99.885 1.00 42.88 N
ATOM 15 C8 G A 939 49.454 61.366 99.937 1.00 42.18 C
ATOM 16 N7 G A 939 48.241 61.302 100.412 1.00 43.17 N
ATOM 17 C5 G A 939 47.899 62.622 100.667 1.00 42.96 C
ATOM 18 C6 G A 939 46.716 63.174 101.216 1.00 44.07 C
ATOM 19 O6 G A 939 45.708 62.589 101.612 1.00 46.88 O
ATOM 20 N1 G A 939 46.784 64.557 101.295 1.00 44.50 N
ATOM 21 C2 G A 939 47.855 65.315 100.906 1.00 44.70 C
ATOM 22 N2 G A 939 47.723 66.639 101.063 1.00 44.20 N
ATOM 23 N3 G A 939 48.973 64.814 100.402 1.00 43.21 N
ATOM 24 C4 G A 939 48.926 63.469 100.316 1.00 42.80 C
ATOM 25 P G A 940 55.799 63.623 99.934 1.00 45.05 P
ATOM 26 OP1 G A 940 56.497 64.084 98.712 1.00 45.29 O
ATOM 27 OP2 G A 940 56.169 62.323 100.543 1.00 44.70 O
ATOM 28 O5' G A 940 55.939 64.754 101.036 1.00 46.89 O
TER
ATOM 1 O3' G B 939 54.229 63.635 99.629 1.00 44.80 O
ATOM 2 P G B 940 55.799 63.623 99.934 1.00 45.05 P
ATOM 3 OP1 G B 940 56.497 64.084 98.712 1.00 45.29 O
ATOM 4 OP2 G B 940 56.169 62.323 100.543 1.00 44.70 O
ATOM 5 O5' G B 940 55.939 64.754 101.036 1.00 46.89 O
ATOM 6 C5' G B 940 56.876 64.624 102.097 1.00 47.75 C
ATOM 7 C4' G B 940 56.250 65.084 103.385 1.00 48.33 C
ATOM 8 O4' G B 940 54.984 64.404 103.577 1.00 49.64 O
ATOM 9 C3' G B 940 57.080 64.775 104.615 1.00 48.63 C
ATOM 10 O3' G B 940 56.769 65.752 105.594 1.00 46.58 O
ATOM 11 C2' G B 940 56.545 63.407 105.021 1.00 49.22 C
ATOM 12 O2' G B 940 56.768 63.129 106.383 1.00 52.27 O
ATOM 13 C1' G B 940 55.056 63.573 104.717 1.00 49.87 C
ATOM 14 N9 G B 940 54.339 62.343 104.397 1.00 51.29 N
ATOM 15 C8 G B 940 54.667 61.426 103.429 1.00 52.33 C
ATOM 16 N7 G B 940 53.794 60.463 103.318 1.00 53.80 N
ATOM 17 C5 G B 940 52.839 60.750 104.285 1.00 53.65 C
ATOM 18 C6 G B 940 51.642 60.065 104.630 1.00 54.33 C
ATOM 19 O6 G B 940 51.171 59.034 104.130 1.00 55.37 O
ATOM 20 N1 G B 940 50.969 60.702 105.669 1.00 53.51 N
ATOM 21 C2 G B 940 51.387 61.848 106.293 1.00 51.28 C
ATOM 22 N2 G B 940 50.593 62.304 107.265 1.00 49.32 N
ATOM 23 N3 G B 940 52.497 62.497 105.983 1.00 51.66 N
ATOM 24 C4 G B 940 53.169 61.897 104.974 1.00 52.29 C
ATOM 25 P U B 941 57.532 67.163 105.586 1.00 45.65 P
ATOM 26 OP1 U B 941 57.851 67.532 104.180 1.00 43.89 O
ATOM 27 OP2 U B 941 58.620 67.116 106.594 1.00 45.07 O
ATOM 28 O5' U B 941 56.423 68.175 106.110 1.00 42.35 O
TER
Atoms:
OP1: (54.132,58.192,97.344)
OP2: (51.789,57.739,98.330)
C3': (53.562,62.418,99.403)
C1': (51.290,63.062,99.508)
C5': (53.116,61.127,97.257)
O6: (45.708,62.589,101.612)
O4': (51.527,62.665,98.184)
C8: (49.454,61.366,99.937)
C2: (47.855,65.315,100.906)
C6: (46.716,63.174,101.216)
C5: (47.899,62.622,100.667)
C4: (48.926,63.469,100.316)
P: (52.693,58.563,97.479)
C4': (52.948,62.410,98.008)
C2': (52.353,62.335,100.323)
O2': (52.570,62.993,101.556)
N1: (46.784,64.557,101.295)
N2: (47.723,66.639,101.063)
N3: (48.973,64.814,100.402)
N7: (48.241,61.302,100.412)
N9: (49.943,62.649,99.885)
O5': (52.629,60.042,98.042)
O3': (54.229,63.635,99.629)
OP2: (51.789,57.739,98.330)
C3': (53.562,62.418,99.403)
C1': (51.290,63.062,99.508)
C5': (53.116,61.127,97.257)
O6: (45.708,62.589,101.612)
O4': (51.527,62.665,98.184)
C8: (49.454,61.366,99.937)
C2: (47.855,65.315,100.906)
C6: (46.716,63.174,101.216)
C5: (47.899,62.622,100.667)
C4: (48.926,63.469,100.316)
P: (52.693,58.563,97.479)
C4': (52.948,62.410,98.008)
C2': (52.353,62.335,100.323)
O2': (52.570,62.993,101.556)
N1: (46.784,64.557,101.295)
N2: (47.723,66.639,101.063)
N3: (48.973,64.814,100.402)
N7: (48.241,61.302,100.412)
N9: (49.943,62.649,99.885)
O5': (52.629,60.042,98.042)
O3': (54.229,63.635,99.629)
OP1: (56.497,64.084,98.712)
OP2: (56.169,62.323,100.543)
C3': (57.080,64.775,104.615)
C1': (55.056,63.573,104.717)
C5': (56.876,64.624,102.097)
O6: (51.171,59.034,104.130)
O4': (54.984,64.404,103.577)
C8: (54.667,61.426,103.429)
C2: (51.387,61.848,106.293)
C6: (51.642,60.065,104.630)
C5: (52.839,60.750,104.285)
C4: (53.169,61.897,104.974)
P: (55.799,63.623,99.934)
C4': (56.250,65.084,103.385)
C2': (56.545,63.407,105.021)
O2': (56.768,63.129,106.383)
N1: (50.969,60.702,105.669)
N2: (50.593,62.304,107.265)
N3: (52.497,62.497,105.983)
N7: (53.794,60.463,103.318)
N9: (54.339,62.343,104.397)
O5': (55.939,64.754,101.036)
O3': (56.769,65.752,105.594)
OP2: (56.169,62.323,100.543)
C3': (57.080,64.775,104.615)
C1': (55.056,63.573,104.717)
C5': (56.876,64.624,102.097)
O6: (51.171,59.034,104.130)
O4': (54.984,64.404,103.577)
C8: (54.667,61.426,103.429)
C2: (51.387,61.848,106.293)
C6: (51.642,60.065,104.630)
C5: (52.839,60.750,104.285)
C4: (53.169,61.897,104.974)
P: (55.799,63.623,99.934)
C4': (56.250,65.084,103.385)
C2': (56.545,63.407,105.021)
O2': (56.768,63.129,106.383)
N1: (50.969,60.702,105.669)
N2: (50.593,62.304,107.265)
N3: (52.497,62.497,105.983)
N7: (53.794,60.463,103.318)
N9: (54.339,62.343,104.397)
O5': (55.939,64.754,101.036)
O3': (56.769,65.752,105.594)
Image (generated by PyMOL):