Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0939:0940
Extra
PDB:
ATOM 1 O3' A A 938 52.115 58.594 95.867 1.00 39.55 O
ATOM 2 P G A 939 52.794 58.465 97.314 1.00 41.65 P
ATOM 3 OP1 G A 939 54.241 58.166 97.161 1.00 41.88 O
ATOM 4 OP2 G A 939 51.941 57.588 98.158 1.00 40.75 O
ATOM 5 O5' G A 939 52.657 59.929 97.902 1.00 42.89 O
ATOM 6 C5' G A 939 53.171 61.045 97.176 1.00 42.66 C
ATOM 7 C4' G A 939 53.002 62.296 97.980 1.00 41.32 C
ATOM 8 O4' G A 939 51.580 62.555 98.140 1.00 39.59 O
ATOM 9 C3' G A 939 53.583 62.228 99.388 1.00 40.88 C
ATOM 10 O3' G A 939 54.250 63.424 99.694 1.00 42.55 O
ATOM 11 C2' G A 939 52.353 62.124 100.274 1.00 40.98 C
ATOM 12 O2' G A 939 52.568 62.707 101.543 1.00 42.28 O
ATOM 13 C1' G A 939 51.326 62.917 99.473 1.00 40.24 C
ATOM 14 N9 G A 939 49.960 62.533 99.803 1.00 41.30 N
ATOM 15 C8 G A 939 49.437 61.264 99.802 1.00 41.99 C
ATOM 16 N7 G A 939 48.209 61.217 100.234 1.00 43.04 N
ATOM 17 C5 G A 939 47.895 62.537 100.520 1.00 44.00 C
ATOM 18 C6 G A 939 46.709 63.103 101.051 1.00 45.73 C
ATOM 19 O6 G A 939 45.681 62.532 101.420 1.00 47.28 O
ATOM 20 N1 G A 939 46.805 64.482 101.156 1.00 46.87 N
ATOM 21 C2 G A 939 47.904 65.222 100.813 1.00 46.31 C
ATOM 22 N2 G A 939 47.786 66.546 100.974 1.00 46.18 N
ATOM 23 N3 G A 939 49.030 64.704 100.346 1.00 44.03 N
ATOM 24 C4 G A 939 48.955 63.365 100.226 1.00 42.58 C
ATOM 25 P G A 940 55.835 63.406 99.877 1.00 42.53 P
ATOM 26 OP1 G A 940 56.457 63.740 98.573 1.00 43.27 O
ATOM 27 OP2 G A 940 56.194 62.140 100.557 1.00 43.24 O
ATOM 28 O5' G A 940 56.083 64.624 100.861 1.00 44.87 O
TER
ATOM 1 O3' G B 939 54.250 63.424 99.694 1.00 42.55 O
ATOM 2 P G B 940 55.835 63.406 99.877 1.00 42.53 P
ATOM 3 OP1 G B 940 56.457 63.740 98.573 1.00 43.27 O
ATOM 4 OP2 G B 940 56.194 62.140 100.557 1.00 43.24 O
ATOM 5 O5' G B 940 56.083 64.624 100.861 1.00 44.87 O
ATOM 6 C5' G B 940 56.992 64.510 101.949 1.00 46.33 C
ATOM 7 C4' G B 940 56.319 64.945 103.218 1.00 47.36 C
ATOM 8 O4' G B 940 55.061 64.239 103.366 1.00 48.41 O
ATOM 9 C3' G B 940 57.115 64.648 104.473 1.00 48.12 C
ATOM 10 O3' G B 940 56.750 65.620 105.441 1.00 46.54 O
ATOM 11 C2' G B 940 56.583 63.276 104.863 1.00 49.27 C
ATOM 12 O2' G B 940 56.772 62.991 106.229 1.00 53.20 O
ATOM 13 C1' G B 940 55.102 63.441 104.531 1.00 50.20 C
ATOM 14 N9 G B 940 54.384 62.204 104.251 1.00 51.28 N
ATOM 15 C8 G B 940 54.685 61.272 103.290 1.00 51.90 C
ATOM 16 N7 G B 940 53.828 60.291 103.244 1.00 53.59 N
ATOM 17 C5 G B 940 52.911 60.587 104.245 1.00 53.89 C
ATOM 18 C6 G B 940 51.745 59.884 104.669 1.00 54.10 C
ATOM 19 O6 G B 940 51.276 58.823 104.232 1.00 53.92 O
ATOM 20 N1 G B 940 51.108 60.539 105.716 1.00 53.79 N
ATOM 21 C2 G B 940 51.530 61.709 106.287 1.00 52.01 C
ATOM 22 N2 G B 940 50.780 62.169 107.291 1.00 51.11 N
ATOM 23 N3 G B 940 52.608 62.374 105.904 1.00 52.48 N
ATOM 24 C4 G B 940 53.246 61.759 104.883 1.00 52.73 C
ATOM 25 P U B 941 57.536 67.016 105.502 1.00 46.37 P
ATOM 26 OP1 U B 941 57.818 67.467 104.112 1.00 44.89 O
ATOM 27 OP2 U B 941 58.653 66.869 106.467 1.00 46.52 O
ATOM 28 O5' U B 941 56.473 68.020 106.118 1.00 42.33 O
TER
ATOM 2 P G A 939 52.794 58.465 97.314 1.00 41.65 P
ATOM 3 OP1 G A 939 54.241 58.166 97.161 1.00 41.88 O
ATOM 4 OP2 G A 939 51.941 57.588 98.158 1.00 40.75 O
ATOM 5 O5' G A 939 52.657 59.929 97.902 1.00 42.89 O
ATOM 6 C5' G A 939 53.171 61.045 97.176 1.00 42.66 C
ATOM 7 C4' G A 939 53.002 62.296 97.980 1.00 41.32 C
ATOM 8 O4' G A 939 51.580 62.555 98.140 1.00 39.59 O
ATOM 9 C3' G A 939 53.583 62.228 99.388 1.00 40.88 C
ATOM 10 O3' G A 939 54.250 63.424 99.694 1.00 42.55 O
ATOM 11 C2' G A 939 52.353 62.124 100.274 1.00 40.98 C
ATOM 12 O2' G A 939 52.568 62.707 101.543 1.00 42.28 O
ATOM 13 C1' G A 939 51.326 62.917 99.473 1.00 40.24 C
ATOM 14 N9 G A 939 49.960 62.533 99.803 1.00 41.30 N
ATOM 15 C8 G A 939 49.437 61.264 99.802 1.00 41.99 C
ATOM 16 N7 G A 939 48.209 61.217 100.234 1.00 43.04 N
ATOM 17 C5 G A 939 47.895 62.537 100.520 1.00 44.00 C
ATOM 18 C6 G A 939 46.709 63.103 101.051 1.00 45.73 C
ATOM 19 O6 G A 939 45.681 62.532 101.420 1.00 47.28 O
ATOM 20 N1 G A 939 46.805 64.482 101.156 1.00 46.87 N
ATOM 21 C2 G A 939 47.904 65.222 100.813 1.00 46.31 C
ATOM 22 N2 G A 939 47.786 66.546 100.974 1.00 46.18 N
ATOM 23 N3 G A 939 49.030 64.704 100.346 1.00 44.03 N
ATOM 24 C4 G A 939 48.955 63.365 100.226 1.00 42.58 C
ATOM 25 P G A 940 55.835 63.406 99.877 1.00 42.53 P
ATOM 26 OP1 G A 940 56.457 63.740 98.573 1.00 43.27 O
ATOM 27 OP2 G A 940 56.194 62.140 100.557 1.00 43.24 O
ATOM 28 O5' G A 940 56.083 64.624 100.861 1.00 44.87 O
TER
ATOM 1 O3' G B 939 54.250 63.424 99.694 1.00 42.55 O
ATOM 2 P G B 940 55.835 63.406 99.877 1.00 42.53 P
ATOM 3 OP1 G B 940 56.457 63.740 98.573 1.00 43.27 O
ATOM 4 OP2 G B 940 56.194 62.140 100.557 1.00 43.24 O
ATOM 5 O5' G B 940 56.083 64.624 100.861 1.00 44.87 O
ATOM 6 C5' G B 940 56.992 64.510 101.949 1.00 46.33 C
ATOM 7 C4' G B 940 56.319 64.945 103.218 1.00 47.36 C
ATOM 8 O4' G B 940 55.061 64.239 103.366 1.00 48.41 O
ATOM 9 C3' G B 940 57.115 64.648 104.473 1.00 48.12 C
ATOM 10 O3' G B 940 56.750 65.620 105.441 1.00 46.54 O
ATOM 11 C2' G B 940 56.583 63.276 104.863 1.00 49.27 C
ATOM 12 O2' G B 940 56.772 62.991 106.229 1.00 53.20 O
ATOM 13 C1' G B 940 55.102 63.441 104.531 1.00 50.20 C
ATOM 14 N9 G B 940 54.384 62.204 104.251 1.00 51.28 N
ATOM 15 C8 G B 940 54.685 61.272 103.290 1.00 51.90 C
ATOM 16 N7 G B 940 53.828 60.291 103.244 1.00 53.59 N
ATOM 17 C5 G B 940 52.911 60.587 104.245 1.00 53.89 C
ATOM 18 C6 G B 940 51.745 59.884 104.669 1.00 54.10 C
ATOM 19 O6 G B 940 51.276 58.823 104.232 1.00 53.92 O
ATOM 20 N1 G B 940 51.108 60.539 105.716 1.00 53.79 N
ATOM 21 C2 G B 940 51.530 61.709 106.287 1.00 52.01 C
ATOM 22 N2 G B 940 50.780 62.169 107.291 1.00 51.11 N
ATOM 23 N3 G B 940 52.608 62.374 105.904 1.00 52.48 N
ATOM 24 C4 G B 940 53.246 61.759 104.883 1.00 52.73 C
ATOM 25 P U B 941 57.536 67.016 105.502 1.00 46.37 P
ATOM 26 OP1 U B 941 57.818 67.467 104.112 1.00 44.89 O
ATOM 27 OP2 U B 941 58.653 66.869 106.467 1.00 46.52 O
ATOM 28 O5' U B 941 56.473 68.020 106.118 1.00 42.33 O
TER
Atoms:
OP1: (54.241,58.166,97.161)
OP2: (51.941,57.588,98.158)
C3': (53.583,62.228,99.388)
C1': (51.326,62.917,99.473)
C5': (53.171,61.045,97.176)
O6: (45.681,62.532,101.420)
O4': (51.580,62.555,98.140)
C8: (49.437,61.264,99.802)
C2: (47.904,65.222,100.813)
C6: (46.709,63.103,101.051)
C5: (47.895,62.537,100.520)
C4: (48.955,63.365,100.226)
P: (52.794,58.465,97.314)
C4': (53.002,62.296,97.980)
C2': (52.353,62.124,100.274)
O2': (52.568,62.707,101.543)
N1: (46.805,64.482,101.156)
N2: (47.786,66.546,100.974)
N3: (49.030,64.704,100.346)
N7: (48.209,61.217,100.234)
N9: (49.960,62.533,99.803)
O5': (52.657,59.929,97.902)
O3': (54.250,63.424,99.694)
OP2: (51.941,57.588,98.158)
C3': (53.583,62.228,99.388)
C1': (51.326,62.917,99.473)
C5': (53.171,61.045,97.176)
O6: (45.681,62.532,101.420)
O4': (51.580,62.555,98.140)
C8: (49.437,61.264,99.802)
C2: (47.904,65.222,100.813)
C6: (46.709,63.103,101.051)
C5: (47.895,62.537,100.520)
C4: (48.955,63.365,100.226)
P: (52.794,58.465,97.314)
C4': (53.002,62.296,97.980)
C2': (52.353,62.124,100.274)
O2': (52.568,62.707,101.543)
N1: (46.805,64.482,101.156)
N2: (47.786,66.546,100.974)
N3: (49.030,64.704,100.346)
N7: (48.209,61.217,100.234)
N9: (49.960,62.533,99.803)
O5': (52.657,59.929,97.902)
O3': (54.250,63.424,99.694)
OP1: (56.457,63.740,98.573)
OP2: (56.194,62.140,100.557)
C3': (57.115,64.648,104.473)
C1': (55.102,63.441,104.531)
C5': (56.992,64.510,101.949)
O6: (51.276,58.823,104.232)
O4': (55.061,64.239,103.366)
C8: (54.685,61.272,103.290)
C2: (51.530,61.709,106.287)
C6: (51.745,59.884,104.669)
C5: (52.911,60.587,104.245)
C4: (53.246,61.759,104.883)
P: (55.835,63.406,99.877)
C4': (56.319,64.945,103.218)
C2': (56.583,63.276,104.863)
O2': (56.772,62.991,106.229)
N1: (51.108,60.539,105.716)
N2: (50.780,62.169,107.291)
N3: (52.608,62.374,105.904)
N7: (53.828,60.291,103.244)
N9: (54.384,62.204,104.251)
O5': (56.083,64.624,100.861)
O3': (56.750,65.620,105.441)
OP2: (56.194,62.140,100.557)
C3': (57.115,64.648,104.473)
C1': (55.102,63.441,104.531)
C5': (56.992,64.510,101.949)
O6: (51.276,58.823,104.232)
O4': (55.061,64.239,103.366)
C8: (54.685,61.272,103.290)
C2: (51.530,61.709,106.287)
C6: (51.745,59.884,104.669)
C5: (52.911,60.587,104.245)
C4: (53.246,61.759,104.883)
P: (55.835,63.406,99.877)
C4': (56.319,64.945,103.218)
C2': (56.583,63.276,104.863)
O2': (56.772,62.991,106.229)
N1: (51.108,60.539,105.716)
N2: (50.780,62.169,107.291)
N3: (52.608,62.374,105.904)
N7: (53.828,60.291,103.244)
N9: (54.384,62.204,104.251)
O5': (56.083,64.624,100.861)
O3': (56.750,65.620,105.441)
Image (generated by PyMOL):