Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0939:0940
Extra
PDB:
ATOM 1 O3' A A 938 52.130 58.651 95.844 1.00 46.99 O
ATOM 2 P G A 939 52.826 58.506 97.278 1.00 47.08 P
ATOM 3 OP1 G A 939 54.277 58.217 97.099 1.00 44.12 O
ATOM 4 OP2 G A 939 51.978 57.591 98.092 1.00 45.65 O
ATOM 5 O5' G A 939 52.696 59.968 97.871 1.00 45.68 O
ATOM 6 C5' G A 939 53.176 61.074 97.120 1.00 45.87 C
ATOM 7 C4' G A 939 53.019 62.336 97.906 1.00 45.77 C
ATOM 8 O4' G A 939 51.605 62.609 98.085 1.00 44.52 O
ATOM 9 C3' G A 939 53.635 62.317 99.298 1.00 45.92 C
ATOM 10 O3' G A 939 54.261 63.550 99.542 1.00 47.72 O
ATOM 11 C2' G A 939 52.426 62.196 100.213 1.00 45.35 C
ATOM 12 O2' G A 939 52.653 62.805 101.467 1.00 44.30 O
ATOM 13 C1' G A 939 51.367 62.958 99.423 1.00 45.44 C
ATOM 14 N9 G A 939 50.008 62.558 99.766 1.00 48.07 N
ATOM 15 C8 G A 939 49.491 61.286 99.766 1.00 48.29 C
ATOM 16 N7 G A 939 48.261 61.235 100.195 1.00 49.26 N
ATOM 17 C5 G A 939 47.942 62.554 100.477 1.00 49.81 C
ATOM 18 C6 G A 939 46.751 63.117 100.988 1.00 51.41 C
ATOM 19 O6 G A 939 45.710 62.548 101.320 1.00 54.15 O
ATOM 20 N1 G A 939 46.847 64.493 101.106 1.00 51.83 N
ATOM 21 C2 G A 939 47.947 65.233 100.782 1.00 51.08 C
ATOM 22 N2 G A 939 47.829 66.551 100.958 1.00 52.46 N
ATOM 23 N3 G A 939 49.073 64.722 100.319 1.00 49.51 N
ATOM 24 C4 G A 939 49.000 63.385 100.194 1.00 48.88 C
ATOM 25 P G A 940 55.830 63.592 99.836 1.00 49.02 P
ATOM 26 OP1 G A 940 56.488 64.160 98.632 1.00 49.11 O
ATOM 27 OP2 G A 940 56.256 62.258 100.349 1.00 47.04 O
ATOM 28 O5' G A 940 55.912 64.673 100.995 1.00 50.05 O
TER
ATOM 1 O3' G B 939 54.261 63.550 99.542 1.00 47.72 O
ATOM 2 P G B 940 55.830 63.592 99.836 1.00 49.02 P
ATOM 3 OP1 G B 940 56.488 64.160 98.632 1.00 49.11 O
ATOM 4 OP2 G B 940 56.256 62.258 100.349 1.00 47.04 O
ATOM 5 O5' G B 940 55.912 64.673 100.995 1.00 50.05 O
ATOM 6 C5' G B 940 56.861 64.553 102.050 1.00 51.04 C
ATOM 7 C4' G B 940 56.248 65.024 103.340 1.00 52.13 C
ATOM 8 O4' G B 940 54.997 64.330 103.558 1.00 52.45 O
ATOM 9 C3' G B 940 57.094 64.751 104.569 1.00 53.86 C
ATOM 10 O3' G B 940 56.767 65.727 105.547 1.00 52.28 O
ATOM 11 C2' G B 940 56.597 63.376 104.994 1.00 55.25 C
ATOM 12 O2' G B 940 56.862 63.124 106.358 1.00 58.53 O
ATOM 13 C1' G B 940 55.101 63.507 104.704 1.00 55.32 C
ATOM 14 N9 G B 940 54.402 62.262 104.405 1.00 56.48 N
ATOM 15 C8 G B 940 54.756 61.319 103.472 1.00 57.34 C
ATOM 16 N7 G B 940 53.893 60.346 103.375 1.00 58.36 N
ATOM 17 C5 G B 940 52.916 60.657 104.312 1.00 58.77 C
ATOM 18 C6 G B 940 51.718 59.972 104.656 1.00 59.80 C
ATOM 19 O6 G B 940 51.259 58.921 104.180 1.00 61.42 O
ATOM 20 N1 G B 940 51.026 60.633 105.664 1.00 59.28 N
ATOM 21 C2 G B 940 51.426 61.797 106.263 1.00 57.73 C
ATOM 22 N2 G B 940 50.622 62.263 107.222 1.00 56.91 N
ATOM 23 N3 G B 940 52.532 62.449 105.948 1.00 57.56 N
ATOM 24 C4 G B 940 53.225 61.826 104.971 1.00 57.73 C
ATOM 25 P U B 941 57.562 67.117 105.575 1.00 50.95 P
ATOM 26 OP1 U B 941 57.832 67.523 104.170 1.00 49.46 O
ATOM 27 OP2 U B 941 58.690 66.975 106.527 1.00 52.45 O
ATOM 28 O5' U B 941 56.515 68.144 106.186 1.00 48.80 O
TER
ATOM 2 P G A 939 52.826 58.506 97.278 1.00 47.08 P
ATOM 3 OP1 G A 939 54.277 58.217 97.099 1.00 44.12 O
ATOM 4 OP2 G A 939 51.978 57.591 98.092 1.00 45.65 O
ATOM 5 O5' G A 939 52.696 59.968 97.871 1.00 45.68 O
ATOM 6 C5' G A 939 53.176 61.074 97.120 1.00 45.87 C
ATOM 7 C4' G A 939 53.019 62.336 97.906 1.00 45.77 C
ATOM 8 O4' G A 939 51.605 62.609 98.085 1.00 44.52 O
ATOM 9 C3' G A 939 53.635 62.317 99.298 1.00 45.92 C
ATOM 10 O3' G A 939 54.261 63.550 99.542 1.00 47.72 O
ATOM 11 C2' G A 939 52.426 62.196 100.213 1.00 45.35 C
ATOM 12 O2' G A 939 52.653 62.805 101.467 1.00 44.30 O
ATOM 13 C1' G A 939 51.367 62.958 99.423 1.00 45.44 C
ATOM 14 N9 G A 939 50.008 62.558 99.766 1.00 48.07 N
ATOM 15 C8 G A 939 49.491 61.286 99.766 1.00 48.29 C
ATOM 16 N7 G A 939 48.261 61.235 100.195 1.00 49.26 N
ATOM 17 C5 G A 939 47.942 62.554 100.477 1.00 49.81 C
ATOM 18 C6 G A 939 46.751 63.117 100.988 1.00 51.41 C
ATOM 19 O6 G A 939 45.710 62.548 101.320 1.00 54.15 O
ATOM 20 N1 G A 939 46.847 64.493 101.106 1.00 51.83 N
ATOM 21 C2 G A 939 47.947 65.233 100.782 1.00 51.08 C
ATOM 22 N2 G A 939 47.829 66.551 100.958 1.00 52.46 N
ATOM 23 N3 G A 939 49.073 64.722 100.319 1.00 49.51 N
ATOM 24 C4 G A 939 49.000 63.385 100.194 1.00 48.88 C
ATOM 25 P G A 940 55.830 63.592 99.836 1.00 49.02 P
ATOM 26 OP1 G A 940 56.488 64.160 98.632 1.00 49.11 O
ATOM 27 OP2 G A 940 56.256 62.258 100.349 1.00 47.04 O
ATOM 28 O5' G A 940 55.912 64.673 100.995 1.00 50.05 O
TER
ATOM 1 O3' G B 939 54.261 63.550 99.542 1.00 47.72 O
ATOM 2 P G B 940 55.830 63.592 99.836 1.00 49.02 P
ATOM 3 OP1 G B 940 56.488 64.160 98.632 1.00 49.11 O
ATOM 4 OP2 G B 940 56.256 62.258 100.349 1.00 47.04 O
ATOM 5 O5' G B 940 55.912 64.673 100.995 1.00 50.05 O
ATOM 6 C5' G B 940 56.861 64.553 102.050 1.00 51.04 C
ATOM 7 C4' G B 940 56.248 65.024 103.340 1.00 52.13 C
ATOM 8 O4' G B 940 54.997 64.330 103.558 1.00 52.45 O
ATOM 9 C3' G B 940 57.094 64.751 104.569 1.00 53.86 C
ATOM 10 O3' G B 940 56.767 65.727 105.547 1.00 52.28 O
ATOM 11 C2' G B 940 56.597 63.376 104.994 1.00 55.25 C
ATOM 12 O2' G B 940 56.862 63.124 106.358 1.00 58.53 O
ATOM 13 C1' G B 940 55.101 63.507 104.704 1.00 55.32 C
ATOM 14 N9 G B 940 54.402 62.262 104.405 1.00 56.48 N
ATOM 15 C8 G B 940 54.756 61.319 103.472 1.00 57.34 C
ATOM 16 N7 G B 940 53.893 60.346 103.375 1.00 58.36 N
ATOM 17 C5 G B 940 52.916 60.657 104.312 1.00 58.77 C
ATOM 18 C6 G B 940 51.718 59.972 104.656 1.00 59.80 C
ATOM 19 O6 G B 940 51.259 58.921 104.180 1.00 61.42 O
ATOM 20 N1 G B 940 51.026 60.633 105.664 1.00 59.28 N
ATOM 21 C2 G B 940 51.426 61.797 106.263 1.00 57.73 C
ATOM 22 N2 G B 940 50.622 62.263 107.222 1.00 56.91 N
ATOM 23 N3 G B 940 52.532 62.449 105.948 1.00 57.56 N
ATOM 24 C4 G B 940 53.225 61.826 104.971 1.00 57.73 C
ATOM 25 P U B 941 57.562 67.117 105.575 1.00 50.95 P
ATOM 26 OP1 U B 941 57.832 67.523 104.170 1.00 49.46 O
ATOM 27 OP2 U B 941 58.690 66.975 106.527 1.00 52.45 O
ATOM 28 O5' U B 941 56.515 68.144 106.186 1.00 48.80 O
TER
Atoms:
OP1: (54.277,58.217,97.099)
OP2: (51.978,57.591,98.092)
C3': (53.635,62.317,99.298)
C1': (51.367,62.958,99.423)
C5': (53.176,61.074,97.120)
O6: (45.710,62.548,101.320)
O4': (51.605,62.609,98.085)
C8: (49.491,61.286,99.766)
C2: (47.947,65.233,100.782)
C6: (46.751,63.117,100.988)
C5: (47.942,62.554,100.477)
C4: (49.000,63.385,100.194)
P: (52.826,58.506,97.278)
C4': (53.019,62.336,97.906)
C2': (52.426,62.196,100.213)
O2': (52.653,62.805,101.467)
N1: (46.847,64.493,101.106)
N2: (47.829,66.551,100.958)
N3: (49.073,64.722,100.319)
N7: (48.261,61.235,100.195)
N9: (50.008,62.558,99.766)
O5': (52.696,59.968,97.871)
O3': (54.261,63.550,99.542)
OP2: (51.978,57.591,98.092)
C3': (53.635,62.317,99.298)
C1': (51.367,62.958,99.423)
C5': (53.176,61.074,97.120)
O6: (45.710,62.548,101.320)
O4': (51.605,62.609,98.085)
C8: (49.491,61.286,99.766)
C2: (47.947,65.233,100.782)
C6: (46.751,63.117,100.988)
C5: (47.942,62.554,100.477)
C4: (49.000,63.385,100.194)
P: (52.826,58.506,97.278)
C4': (53.019,62.336,97.906)
C2': (52.426,62.196,100.213)
O2': (52.653,62.805,101.467)
N1: (46.847,64.493,101.106)
N2: (47.829,66.551,100.958)
N3: (49.073,64.722,100.319)
N7: (48.261,61.235,100.195)
N9: (50.008,62.558,99.766)
O5': (52.696,59.968,97.871)
O3': (54.261,63.550,99.542)
OP1: (56.488,64.160,98.632)
OP2: (56.256,62.258,100.349)
C3': (57.094,64.751,104.569)
C1': (55.101,63.507,104.704)
C5': (56.861,64.553,102.050)
O6: (51.259,58.921,104.180)
O4': (54.997,64.330,103.558)
C8: (54.756,61.319,103.472)
C2: (51.426,61.797,106.263)
C6: (51.718,59.972,104.656)
C5: (52.916,60.657,104.312)
C4: (53.225,61.826,104.971)
P: (55.830,63.592,99.836)
C4': (56.248,65.024,103.340)
C2': (56.597,63.376,104.994)
O2': (56.862,63.124,106.358)
N1: (51.026,60.633,105.664)
N2: (50.622,62.263,107.222)
N3: (52.532,62.449,105.948)
N7: (53.893,60.346,103.375)
N9: (54.402,62.262,104.405)
O5': (55.912,64.673,100.995)
O3': (56.767,65.727,105.547)
OP2: (56.256,62.258,100.349)
C3': (57.094,64.751,104.569)
C1': (55.101,63.507,104.704)
C5': (56.861,64.553,102.050)
O6: (51.259,58.921,104.180)
O4': (54.997,64.330,103.558)
C8: (54.756,61.319,103.472)
C2: (51.426,61.797,106.263)
C6: (51.718,59.972,104.656)
C5: (52.916,60.657,104.312)
C4: (53.225,61.826,104.971)
P: (55.830,63.592,99.836)
C4': (56.248,65.024,103.340)
C2': (56.597,63.376,104.994)
O2': (56.862,63.124,106.358)
N1: (51.026,60.633,105.664)
N2: (50.622,62.263,107.222)
N3: (52.532,62.449,105.948)
N7: (53.893,60.346,103.375)
N9: (54.402,62.262,104.405)
O5': (55.912,64.673,100.995)
O3': (56.767,65.727,105.547)
Image (generated by PyMOL):