ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0973:9100

Extra

PDB:
ATOM 1 O3' A A 972 43.610 62.862 108.571 1.00 36.65 O
ATOM 2 P A A 973 42.810 63.249 107.243 1.00 38.23 P
ATOM 3 OP1 A A 973 41.561 62.446 107.226 1.00 38.85 O
ATOM 4 OP2 A A 973 43.750 63.147 106.104 1.00 37.49 O
ATOM 5 O5' A A 973 42.428 64.776 107.502 1.00 36.76 O
ATOM 6 C5' A A 973 41.493 65.118 108.543 1.00 37.95 C
ATOM 7 C4' A A 973 41.545 66.594 108.859 1.00 38.52 C
ATOM 8 O4' A A 973 42.871 66.954 109.330 1.00 40.64 O
ATOM 9 C3' A A 973 41.271 67.563 107.721 1.00 38.24 C
ATOM 10 O3' A A 973 39.870 67.748 107.528 1.00 40.50 O
ATOM 11 C2' A A 973 41.914 68.837 108.258 1.00 39.15 C
ATOM 12 O2' A A 973 41.122 69.487 109.234 1.00 37.34 O
ATOM 13 C1' A A 973 43.178 68.278 108.919 1.00 38.98 C
ATOM 14 N9 A A 973 44.281 68.214 107.960 1.00 39.34 N
ATOM 15 C8 A A 973 44.774 67.111 107.300 1.00 40.06 C
ATOM 16 N7 A A 973 45.732 67.385 106.452 1.00 39.47 N
ATOM 17 C5 A A 973 45.891 68.759 106.569 1.00 40.05 C
ATOM 18 C6 A A 973 46.751 69.662 105.936 1.00 40.29 C
ATOM 19 N6 A A 973 47.647 69.305 105.015 1.00 41.11 N
ATOM 20 N1 A A 973 46.661 70.963 106.285 1.00 41.56 N
ATOM 21 C2 A A 973 45.763 71.317 107.212 1.00 40.04 C
ATOM 22 N3 A A 973 44.901 70.561 107.877 1.00 38.43 N
ATOM 23 C4 A A 973 45.015 69.278 107.504 1.00 38.46 C
ATOM 24 P C A 974 39.259 67.920 106.043 1.00 40.01 P
ATOM 25 OP1 C A 974 38.131 68.874 106.202 1.00 37.44 O
ATOM 26 OP2 C A 974 39.012 66.579 105.454 1.00 39.80 O
ATOM 27 O5' C A 974 40.403 68.622 105.190 1.00 39.43 O
TER

ATOM 1 O3' G B 99 31.309 66.636 109.841 1.00 40.66 O
ATOM 2 P G B 100 31.875 65.289 110.491 1.00 40.68 P
ATOM 3 OP1 G B 100 31.158 64.174 109.824 1.00 42.86 O
ATOM 4 OP2 G B 100 31.844 65.414 111.970 1.00 39.30 O
ATOM 5 O5' G B 100 33.395 65.265 110.023 1.00 41.31 O
ATOM 6 C5' G B 100 34.385 64.489 110.720 1.00 38.43 C
ATOM 7 C4' G B 100 35.756 64.806 110.176 1.00 37.76 C
ATOM 8 O4' G B 100 36.082 66.202 110.428 1.00 37.13 O
ATOM 9 C3' G B 100 36.904 64.055 110.814 1.00 37.86 C
ATOM 10 O3' G B 100 37.020 62.749 110.269 1.00 38.98 O
ATOM 11 C2' G B 100 38.087 64.946 110.465 1.00 36.92 C
ATOM 12 O2' G B 100 38.463 64.826 109.111 1.00 37.38 O
ATOM 13 C1' G B 100 37.475 66.331 110.659 1.00 35.75 C
ATOM 14 N9 G B 100 37.674 66.850 112.008 1.00 35.90 N
ATOM 15 C8 G B 100 36.709 67.092 112.956 1.00 36.01 C
ATOM 16 N7 G B 100 37.193 67.563 114.072 1.00 35.70 N
ATOM 17 C5 G B 100 38.558 67.638 113.850 1.00 35.62 C
ATOM 18 C6 G B 100 39.602 68.084 114.699 1.00 37.42 C
ATOM 19 O6 G B 100 39.522 68.519 115.860 1.00 34.86 O
ATOM 20 N1 G B 100 40.842 67.993 114.071 1.00 37.88 N
ATOM 21 C2 G B 100 41.049 67.535 112.791 1.00 36.95 C
ATOM 22 N2 G B 100 42.320 67.532 112.362 1.00 37.89 N
ATOM 23 N3 G B 100 40.084 67.115 111.993 1.00 35.35 N
ATOM 24 C4 G B 100 38.873 67.197 112.581 1.00 35.39 C
ATOM 25 P G B 101 37.330 61.511 111.242 1.00 40.36 P
ATOM 26 OP1 G B 101 37.686 60.342 110.389 1.00 39.53 O
ATOM 27 OP2 G B 101 36.219 61.398 112.223 1.00 41.01 O
ATOM 28 O5' G B 101 38.643 61.960 112.018 1.00 38.82 O
TER

Atoms:
OP1: (41.561,62.446,107.226)
OP2: (43.750,63.147,106.104)
C3': (41.271,67.563,107.721)
C1': (43.178,68.278,108.919)
C5': (41.493,65.118,108.543)
O4': (42.871,66.954,109.330)
C8: (44.774,67.111,107.300)
O2': (41.122,69.487,109.234)
C6: (46.751,69.662,105.936)
C5: (45.891,68.759,106.569)
C4: (45.015,69.278,107.504)
P: (42.810,63.249,107.243)
C4': (41.545,66.594,108.859)
C2': (41.914,68.837,108.258)
C2: (45.763,71.317,107.212)
N1: (46.661,70.963,106.285)
N3: (44.901,70.561,107.877)
N6: (47.647,69.305,105.015)
N7: (45.732,67.385,106.452)
N9: (44.281,68.214,107.960)
O5': (42.428,64.776,107.502)
O3': (39.870,67.748,107.528)
OP1: (31.158,64.174,109.824)
OP2: (31.844,65.414,111.970)
C3': (36.904,64.055,110.814)
C1': (37.475,66.331,110.659)
C5': (34.385,64.489,110.720)
O6: (39.522,68.519,115.860)
O4': (36.082,66.202,110.428)
C8: (36.709,67.092,112.956)
C2: (41.049,67.535,112.791)
C6: (39.602,68.084,114.699)
C5: (38.558,67.638,113.850)
C4: (38.873,67.197,112.581)
P: (31.875,65.289,110.491)
C4': (35.756,64.806,110.176)
C2': (38.087,64.946,110.465)
O2': (38.463,64.826,109.111)
N1: (40.842,67.993,114.071)
N2: (42.320,67.532,112.362)
N3: (40.084,67.115,111.993)
N7: (37.193,67.563,114.072)
N9: (37.674,66.850,112.008)
O5': (33.395,65.265,110.023)
O3': (37.020,62.749,110.269)
Image (generated by PyMOL):
PyMOL image
show in jmol