ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0973:9100

Extra

PDB:
ATOM 1 O3' A A 972 43.458 62.825 108.561 1.00 36.78 O
ATOM 2 P A A 973 42.729 63.189 107.187 1.00 36.70 P
ATOM 3 OP1 A A 973 41.543 62.304 107.050 1.00 36.61 O
ATOM 4 OP2 A A 973 43.757 63.189 106.122 1.00 35.05 O
ATOM 5 O5' A A 973 42.242 64.686 107.448 1.00 36.84 O
ATOM 6 C5' A A 973 41.305 64.984 108.504 1.00 37.00 C
ATOM 7 C4' A A 973 41.329 66.459 108.846 1.00 37.93 C
ATOM 8 O4' A A 973 42.639 66.825 109.355 1.00 38.23 O
ATOM 9 C3' A A 973 41.073 67.445 107.715 1.00 38.06 C
ATOM 10 O3' A A 973 39.678 67.638 107.493 1.00 40.04 O
ATOM 11 C2' A A 973 41.699 68.715 108.276 1.00 38.66 C
ATOM 12 O2' A A 973 40.868 69.348 109.229 1.00 38.10 O
ATOM 13 C1' A A 973 42.946 68.158 108.969 1.00 38.54 C
ATOM 14 N9 A A 973 44.079 68.118 108.043 1.00 38.81 N
ATOM 15 C8 A A 973 44.601 67.016 107.407 1.00 40.25 C
ATOM 16 N7 A A 973 45.565 67.296 106.568 1.00 39.35 N
ATOM 17 C5 A A 973 45.699 68.671 106.668 1.00 38.51 C
ATOM 18 C6 A A 973 46.541 69.574 106.020 1.00 38.25 C
ATOM 19 N6 A A 973 47.422 69.213 105.085 1.00 38.83 N
ATOM 20 N1 A A 973 46.442 70.876 106.358 1.00 37.70 N
ATOM 21 C2 A A 973 45.539 71.229 107.277 1.00 37.84 C
ATOM 22 N3 A A 973 44.678 70.472 107.945 1.00 37.23 N
ATOM 23 C4 A A 973 44.810 69.187 107.591 1.00 37.79 C
ATOM 24 P C A 974 39.107 67.845 106.000 1.00 39.80 P
ATOM 25 OP1 C A 974 37.983 68.814 106.129 1.00 36.97 O
ATOM 26 OP2 C A 974 38.870 66.510 105.385 1.00 39.27 O
ATOM 27 O5' C A 974 40.291 68.527 105.185 1.00 39.83 O
TER

ATOM 1 O3' G B 99 31.095 66.626 109.895 1.00 42.89 O
ATOM 2 P G B 100 31.690 65.290 110.536 1.00 42.59 P
ATOM 3 OP1 G B 100 31.090 64.159 109.787 1.00 43.54 O
ATOM 4 OP2 G B 100 31.517 65.384 112.008 1.00 42.90 O
ATOM 5 O5' G B 100 33.245 65.373 110.198 1.00 42.11 O
ATOM 6 C5' G B 100 34.199 64.481 110.801 1.00 37.58 C
ATOM 7 C4' G B 100 35.575 64.754 110.246 1.00 36.75 C
ATOM 8 O4' G B 100 35.920 66.147 110.464 1.00 37.21 O
ATOM 9 C3' G B 100 36.707 63.995 110.905 1.00 36.84 C
ATOM 10 O3' G B 100 36.825 62.686 110.382 1.00 38.15 O
ATOM 11 C2' G B 100 37.915 64.863 110.579 1.00 36.31 C
ATOM 12 O2' G B 100 38.385 64.688 109.258 1.00 34.65 O
ATOM 13 C1' G B 100 37.314 66.262 110.711 1.00 36.21 C
ATOM 14 N9 G B 100 37.497 66.842 112.036 1.00 36.64 N
ATOM 15 C8 G B 100 36.517 67.132 112.953 1.00 37.57 C
ATOM 16 N7 G B 100 36.982 67.645 114.057 1.00 38.44 N
ATOM 17 C5 G B 100 38.353 67.702 113.859 1.00 38.59 C
ATOM 18 C6 G B 100 39.386 68.177 114.713 1.00 40.32 C
ATOM 19 O6 G B 100 39.288 68.654 115.857 1.00 37.68 O
ATOM 20 N1 G B 100 40.637 68.056 114.111 1.00 41.31 N
ATOM 21 C2 G B 100 40.863 67.541 112.856 1.00 40.91 C
ATOM 22 N2 G B 100 42.143 67.500 112.460 1.00 42.98 N
ATOM 23 N3 G B 100 39.908 67.099 112.053 1.00 38.22 N
ATOM 24 C4 G B 100 38.688 67.209 112.614 1.00 37.40 C
ATOM 25 P G B 101 37.194 61.478 111.365 1.00 40.49 P
ATOM 26 OP1 G B 101 37.516 60.292 110.522 1.00 38.75 O
ATOM 27 OP2 G B 101 36.124 61.388 112.395 1.00 40.78 O
ATOM 28 O5' G B 101 38.526 61.960 112.091 1.00 39.14 O
TER

Atoms:
OP1: (41.543,62.304,107.050)
OP2: (43.757,63.189,106.122)
C3': (41.073,67.445,107.715)
C1': (42.946,68.158,108.969)
C5': (41.305,64.984,108.504)
O4': (42.639,66.825,109.355)
C8: (44.601,67.016,107.407)
O2': (40.868,69.348,109.229)
C6: (46.541,69.574,106.020)
C5: (45.699,68.671,106.668)
C4: (44.810,69.187,107.591)
P: (42.729,63.189,107.187)
C4': (41.329,66.459,108.846)
C2': (41.699,68.715,108.276)
C2: (45.539,71.229,107.277)
N1: (46.442,70.876,106.358)
N3: (44.678,70.472,107.945)
N6: (47.422,69.213,105.085)
N7: (45.565,67.296,106.568)
N9: (44.079,68.118,108.043)
O5': (42.242,64.686,107.448)
O3': (39.678,67.638,107.493)
OP1: (31.090,64.159,109.787)
OP2: (31.517,65.384,112.008)
C3': (36.707,63.995,110.905)
C1': (37.314,66.262,110.711)
C5': (34.199,64.481,110.801)
O6: (39.288,68.654,115.857)
O4': (35.920,66.147,110.464)
C8: (36.517,67.132,112.953)
C2: (40.863,67.541,112.856)
C6: (39.386,68.177,114.713)
C5: (38.353,67.702,113.859)
C4: (38.688,67.209,112.614)
P: (31.690,65.290,110.536)
C4': (35.575,64.754,110.246)
C2': (37.915,64.863,110.579)
O2': (38.385,64.688,109.258)
N1: (40.637,68.056,114.111)
N2: (42.143,67.500,112.460)
N3: (39.908,67.099,112.053)
N7: (36.982,67.645,114.057)
N9: (37.497,66.842,112.036)
O5': (33.245,65.373,110.198)
O3': (36.825,62.686,110.382)
Image (generated by PyMOL):
PyMOL image
show in jmol