ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0423:0178

Extra

PDB:
ATOM 1 O3' U A 422 66.925 115.935 16.174 1.00 52.68 O
ATOM 2 P A A 423 66.025 115.754 17.484 1.00 54.59 P
ATOM 3 OP1 A A 423 66.477 116.804 18.425 1.00 56.82 O
ATOM 4 OP2 A A 423 66.082 114.329 17.898 1.00 53.59 O
ATOM 5 O5' A A 423 64.538 116.086 17.010 1.00 54.44 O
ATOM 6 C5' A A 423 64.220 117.300 16.292 1.00 55.38 C
ATOM 7 C4' A A 423 62.945 117.110 15.500 1.00 55.59 C
ATOM 8 O4' A A 423 63.148 116.084 14.497 1.00 55.54 O
ATOM 9 C3' A A 423 61.785 116.623 16.345 1.00 57.46 C
ATOM 10 O3' A A 423 61.076 117.735 16.870 1.00 61.35 O
ATOM 11 C2' A A 423 60.963 115.786 15.373 1.00 57.04 C
ATOM 12 O2' A A 423 60.109 116.560 14.564 1.00 57.91 O
ATOM 13 C1' A A 423 62.058 115.181 14.498 1.00 55.22 C
ATOM 14 N9 A A 423 62.555 113.868 14.923 1.00 54.24 N
ATOM 15 C8 A A 423 63.775 113.557 15.493 1.00 52.70 C
ATOM 16 N7 A A 423 63.955 112.273 15.693 1.00 50.61 N
ATOM 17 C5 A A 423 62.774 111.700 15.242 1.00 51.68 C
ATOM 18 C6 A A 423 62.347 110.368 15.159 1.00 51.05 C
ATOM 19 N6 A A 423 63.094 109.329 15.529 1.00 52.19 N
ATOM 20 N1 A A 423 61.110 110.134 14.669 1.00 51.99 N
ATOM 21 C2 A A 423 60.364 111.181 14.281 1.00 53.51 C
ATOM 22 N3 A A 423 60.660 112.480 14.295 1.00 52.65 N
ATOM 23 C4 A A 423 61.894 112.674 14.789 1.00 52.88 C
ATOM 24 P A A 424 60.209 117.568 18.209 1.00 63.56 P
ATOM 25 OP1 A A 424 59.325 118.764 18.315 1.00 63.98 O
ATOM 26 OP2 A A 424 61.137 117.235 19.326 1.00 64.70 O
ATOM 27 O5' A A 424 59.305 116.292 17.905 1.00 62.57 O
TER

ATOM 1 O3' A B 177 72.005 108.190 24.885 1.00 49.78 O
ATOM 2 P G B 178 73.013 107.809 23.702 1.00 51.12 P
ATOM 3 OP1 G B 178 73.744 106.575 24.123 1.00 49.05 O
ATOM 4 OP2 G B 178 73.788 109.028 23.337 1.00 51.89 O
ATOM 5 O5' G B 178 72.029 107.458 22.499 1.00 50.43 O
ATOM 6 C5' G B 178 71.257 106.244 22.501 1.00 50.59 C
ATOM 7 C4' G B 178 70.414 106.163 21.256 1.00 51.11 C
ATOM 8 O4' G B 178 69.385 107.179 21.299 1.00 52.61 O
ATOM 9 C3' G B 178 71.157 106.419 19.959 1.00 52.22 C
ATOM 10 O3' G B 178 71.780 105.216 19.520 1.00 55.83 O
ATOM 11 C2' G B 178 70.042 106.893 19.039 1.00 51.54 C
ATOM 12 O2' G B 178 69.259 105.816 18.573 1.00 51.44 O
ATOM 13 C1' G B 178 69.182 107.714 20.004 1.00 51.14 C
ATOM 14 N9 G B 178 69.482 109.144 20.067 1.00 51.31 N
ATOM 15 C8 G B 178 70.567 109.734 20.678 1.00 50.35 C
ATOM 16 N7 G B 178 70.551 111.035 20.605 1.00 49.28 N
ATOM 17 C5 G B 178 69.392 111.324 19.899 1.00 50.18 C
ATOM 18 C6 G B 178 68.847 112.568 19.508 1.00 51.77 C
ATOM 19 O6 G B 178 69.293 113.705 19.713 1.00 53.89 O
ATOM 20 N1 G B 178 67.660 112.407 18.802 1.00 51.41 N
ATOM 21 C2 G B 178 67.077 111.207 18.502 1.00 49.00 C
ATOM 22 N2 G B 178 65.935 111.272 17.797 1.00 47.42 N
ATOM 23 N3 G B 178 67.576 110.036 18.860 1.00 48.46 N
ATOM 24 C4 G B 178 68.725 110.168 19.552 1.00 49.70 C
ATOM 25 P A B 179 73.145 105.280 18.676 1.00 58.61 P
ATOM 26 OP1 A B 179 73.654 103.883 18.591 1.00 56.98 O
ATOM 27 OP2 A B 179 74.025 106.345 19.229 1.00 58.31 O
ATOM 28 O5' A B 179 72.641 105.757 17.239 1.00 59.96 O
TER

Atoms:
OP1: (66.477,116.804,18.425)
OP2: (66.082,114.329,17.898)
C3': (61.785,116.623,16.345)
C1': (62.058,115.181,14.498)
C5': (64.220,117.300,16.292)
O4': (63.148,116.084,14.497)
C8: (63.775,113.557,15.493)
O2': (60.109,116.560,14.564)
C6: (62.347,110.368,15.159)
C5: (62.774,111.700,15.242)
C4: (61.894,112.674,14.789)
P: (66.025,115.754,17.484)
C4': (62.945,117.110,15.500)
C2': (60.963,115.786,15.373)
C2: (60.364,111.181,14.281)
N1: (61.110,110.134,14.669)
N3: (60.660,112.480,14.295)
N6: (63.094,109.329,15.529)
N7: (63.955,112.273,15.693)
N9: (62.555,113.868,14.923)
O5': (64.538,116.086,17.010)
O3': (61.076,117.735,16.870)
OP1: (73.744,106.575,24.123)
OP2: (73.788,109.028,23.337)
C3': (71.157,106.419,19.959)
C1': (69.182,107.714,20.004)
C5': (71.257,106.244,22.501)
O6: (69.293,113.705,19.713)
O4': (69.385,107.179,21.299)
C8: (70.567,109.734,20.678)
C2: (67.077,111.207,18.502)
C6: (68.847,112.568,19.508)
C5: (69.392,111.324,19.899)
C4: (68.725,110.168,19.552)
P: (73.013,107.809,23.702)
C4': (70.414,106.163,21.256)
C2': (70.042,106.893,19.039)
O2': (69.259,105.816,18.573)
N1: (67.660,112.407,18.802)
N2: (65.935,111.272,17.797)
N3: (67.576,110.036,18.860)
N7: (70.551,111.035,20.605)
N9: (69.482,109.144,20.067)
O5': (72.029,107.458,22.499)
O3': (71.780,105.216,19.520)
Image (generated by PyMOL):
PyMOL image
show in jmol