Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1322:A1319
Extra
PDB:
ATOM 1 O3' A A1321 53.923 -39.784 -61.324 1.00 44.72 O
ATOM 2 P A A1322 52.671 -39.496 -60.365 1.00 52.93 P
ATOM 3 OP1 A A1322 51.447 -40.042 -60.993 1.00 54.79 O
ATOM 4 OP2 A A1322 52.751 -38.055 -60.044 1.00 59.91 O
ATOM 5 O5' A A1322 52.937 -40.335 -59.039 1.00 46.60 O
ATOM 6 C5' A A1322 52.560 -41.704 -58.951 1.00 50.39 C
ATOM 7 C4' A A1322 53.067 -42.297 -57.657 1.00 51.06 C
ATOM 8 O4' A A1322 54.444 -41.866 -57.493 1.00 51.29 O
ATOM 9 C3' A A1322 52.395 -41.841 -56.363 1.00 46.75 C
ATOM 10 O3' A A1322 51.178 -42.524 -56.061 1.00 51.37 O
ATOM 11 C2' A A1322 53.489 -42.090 -55.325 1.00 44.12 C
ATOM 12 O2' A A1322 53.623 -43.421 -54.858 1.00 48.68 O
ATOM 13 C1' A A1322 54.744 -41.729 -56.115 1.00 47.99 C
ATOM 14 N9 A A1322 55.148 -40.352 -55.823 1.00 47.31 N
ATOM 15 C8 A A1322 55.067 -39.224 -56.598 1.00 46.90 C
ATOM 16 N7 A A1322 55.482 -38.139 -55.989 1.00 45.63 N
ATOM 17 C5 A A1322 55.873 -38.587 -54.733 1.00 44.61 C
ATOM 18 C6 A A1322 56.400 -37.919 -53.603 1.00 49.96 C
ATOM 19 N6 A A1322 56.621 -36.597 -53.554 1.00 55.48 N
ATOM 20 N1 A A1322 56.689 -38.663 -52.510 1.00 49.97 N
ATOM 21 C2 A A1322 56.450 -39.976 -52.551 1.00 40.83 C
ATOM 22 N3 A A1322 55.951 -40.711 -53.541 1.00 41.71 N
ATOM 23 C4 A A1322 55.683 -39.947 -54.620 1.00 44.10 C
ATOM 24 P G A1323 49.775 -41.734 -56.155 1.00 45.70 P
ATOM 25 OP1 G A1323 48.700 -42.585 -55.556 1.00 41.81 O
ATOM 26 OP2 G A1323 49.668 -41.274 -57.583 1.00 43.83 O
ATOM 27 O5' G A1323 49.952 -40.458 -55.214 1.00 40.25 O
TER
ATOM 1 O3' C B1318 56.237 -26.337 -58.857 1.00 51.23 O
ATOM 2 P G B1319 56.884 -27.286 -59.985 1.00 56.45 P
ATOM 3 OP1 G B1319 58.201 -26.681 -60.333 1.00 64.08 O
ATOM 4 OP2 G B1319 55.873 -27.492 -61.046 1.00 59.44 O
ATOM 5 O5' G B1319 57.089 -28.702 -59.268 1.00 63.71 O
ATOM 6 C5' G B1319 57.852 -28.818 -58.062 1.00 63.01 C
ATOM 7 C4' G B1319 57.692 -30.196 -57.434 1.00 55.94 C
ATOM 8 O4' G B1319 56.299 -30.453 -57.119 1.00 54.99 O
ATOM 9 C3' G B1319 58.120 -31.399 -58.259 1.00 50.32 C
ATOM 10 O3' G B1319 59.522 -31.633 -58.193 1.00 54.51 O
ATOM 11 C2' G B1319 57.333 -32.538 -57.627 1.00 52.20 C
ATOM 12 O2' G B1319 57.959 -33.081 -56.493 1.00 52.21 O
ATOM 13 C1' G B1319 56.026 -31.843 -57.237 1.00 56.55 C
ATOM 14 N9 G B1319 55.018 -32.021 -58.277 1.00 60.04 N
ATOM 15 C8 G B1319 54.439 -31.038 -59.043 1.00 60.42 C
ATOM 16 N7 G B1319 53.667 -31.506 -59.980 1.00 59.49 N
ATOM 17 C5 G B1319 53.717 -32.877 -59.811 1.00 57.04 C
ATOM 18 C6 G B1319 53.121 -33.909 -60.561 1.00 66.74 C
ATOM 19 O6 G B1319 52.400 -33.816 -61.577 1.00 74.75 O
ATOM 20 N1 G B1319 53.439 -35.160 -60.043 1.00 60.37 N
ATOM 21 C2 G B1319 54.229 -35.386 -58.946 1.00 52.40 C
ATOM 22 N2 G B1319 54.399 -36.670 -58.599 1.00 50.78 N
ATOM 23 N3 G B1319 54.804 -34.430 -58.246 1.00 52.25 N
ATOM 24 C4 G B1319 54.513 -33.211 -58.735 1.00 55.64 C
ATOM 25 P A B1320 60.391 -31.639 -59.552 1.00 65.35 P
ATOM 26 OP1 A B1320 61.827 -31.694 -59.182 1.00 59.54 O
ATOM 27 OP2 A B1320 59.913 -30.554 -60.445 1.00 62.41 O
ATOM 28 O5' A B1320 60.006 -33.019 -60.234 1.00 49.86 O
TER
ATOM 2 P A A1322 52.671 -39.496 -60.365 1.00 52.93 P
ATOM 3 OP1 A A1322 51.447 -40.042 -60.993 1.00 54.79 O
ATOM 4 OP2 A A1322 52.751 -38.055 -60.044 1.00 59.91 O
ATOM 5 O5' A A1322 52.937 -40.335 -59.039 1.00 46.60 O
ATOM 6 C5' A A1322 52.560 -41.704 -58.951 1.00 50.39 C
ATOM 7 C4' A A1322 53.067 -42.297 -57.657 1.00 51.06 C
ATOM 8 O4' A A1322 54.444 -41.866 -57.493 1.00 51.29 O
ATOM 9 C3' A A1322 52.395 -41.841 -56.363 1.00 46.75 C
ATOM 10 O3' A A1322 51.178 -42.524 -56.061 1.00 51.37 O
ATOM 11 C2' A A1322 53.489 -42.090 -55.325 1.00 44.12 C
ATOM 12 O2' A A1322 53.623 -43.421 -54.858 1.00 48.68 O
ATOM 13 C1' A A1322 54.744 -41.729 -56.115 1.00 47.99 C
ATOM 14 N9 A A1322 55.148 -40.352 -55.823 1.00 47.31 N
ATOM 15 C8 A A1322 55.067 -39.224 -56.598 1.00 46.90 C
ATOM 16 N7 A A1322 55.482 -38.139 -55.989 1.00 45.63 N
ATOM 17 C5 A A1322 55.873 -38.587 -54.733 1.00 44.61 C
ATOM 18 C6 A A1322 56.400 -37.919 -53.603 1.00 49.96 C
ATOM 19 N6 A A1322 56.621 -36.597 -53.554 1.00 55.48 N
ATOM 20 N1 A A1322 56.689 -38.663 -52.510 1.00 49.97 N
ATOM 21 C2 A A1322 56.450 -39.976 -52.551 1.00 40.83 C
ATOM 22 N3 A A1322 55.951 -40.711 -53.541 1.00 41.71 N
ATOM 23 C4 A A1322 55.683 -39.947 -54.620 1.00 44.10 C
ATOM 24 P G A1323 49.775 -41.734 -56.155 1.00 45.70 P
ATOM 25 OP1 G A1323 48.700 -42.585 -55.556 1.00 41.81 O
ATOM 26 OP2 G A1323 49.668 -41.274 -57.583 1.00 43.83 O
ATOM 27 O5' G A1323 49.952 -40.458 -55.214 1.00 40.25 O
TER
ATOM 1 O3' C B1318 56.237 -26.337 -58.857 1.00 51.23 O
ATOM 2 P G B1319 56.884 -27.286 -59.985 1.00 56.45 P
ATOM 3 OP1 G B1319 58.201 -26.681 -60.333 1.00 64.08 O
ATOM 4 OP2 G B1319 55.873 -27.492 -61.046 1.00 59.44 O
ATOM 5 O5' G B1319 57.089 -28.702 -59.268 1.00 63.71 O
ATOM 6 C5' G B1319 57.852 -28.818 -58.062 1.00 63.01 C
ATOM 7 C4' G B1319 57.692 -30.196 -57.434 1.00 55.94 C
ATOM 8 O4' G B1319 56.299 -30.453 -57.119 1.00 54.99 O
ATOM 9 C3' G B1319 58.120 -31.399 -58.259 1.00 50.32 C
ATOM 10 O3' G B1319 59.522 -31.633 -58.193 1.00 54.51 O
ATOM 11 C2' G B1319 57.333 -32.538 -57.627 1.00 52.20 C
ATOM 12 O2' G B1319 57.959 -33.081 -56.493 1.00 52.21 O
ATOM 13 C1' G B1319 56.026 -31.843 -57.237 1.00 56.55 C
ATOM 14 N9 G B1319 55.018 -32.021 -58.277 1.00 60.04 N
ATOM 15 C8 G B1319 54.439 -31.038 -59.043 1.00 60.42 C
ATOM 16 N7 G B1319 53.667 -31.506 -59.980 1.00 59.49 N
ATOM 17 C5 G B1319 53.717 -32.877 -59.811 1.00 57.04 C
ATOM 18 C6 G B1319 53.121 -33.909 -60.561 1.00 66.74 C
ATOM 19 O6 G B1319 52.400 -33.816 -61.577 1.00 74.75 O
ATOM 20 N1 G B1319 53.439 -35.160 -60.043 1.00 60.37 N
ATOM 21 C2 G B1319 54.229 -35.386 -58.946 1.00 52.40 C
ATOM 22 N2 G B1319 54.399 -36.670 -58.599 1.00 50.78 N
ATOM 23 N3 G B1319 54.804 -34.430 -58.246 1.00 52.25 N
ATOM 24 C4 G B1319 54.513 -33.211 -58.735 1.00 55.64 C
ATOM 25 P A B1320 60.391 -31.639 -59.552 1.00 65.35 P
ATOM 26 OP1 A B1320 61.827 -31.694 -59.182 1.00 59.54 O
ATOM 27 OP2 A B1320 59.913 -30.554 -60.445 1.00 62.41 O
ATOM 28 O5' A B1320 60.006 -33.019 -60.234 1.00 49.86 O
TER
Atoms:
OP1: (51.447,-40.042,-60.993)
OP2: (52.751,-38.055,-60.044)
C3': (52.395,-41.841,-56.363)
C1': (54.744,-41.729,-56.115)
C5': (52.560,-41.704,-58.951)
O4': (54.444,-41.866,-57.493)
C8: (55.067,-39.224,-56.598)
O2': (53.623,-43.421,-54.858)
C6: (56.400,-37.919,-53.603)
C5: (55.873,-38.587,-54.733)
C4: (55.683,-39.947,-54.620)
P: (52.671,-39.496,-60.365)
C4': (53.067,-42.297,-57.657)
C2': (53.489,-42.090,-55.325)
C2: (56.450,-39.976,-52.551)
N1: (56.689,-38.663,-52.510)
N3: (55.951,-40.711,-53.541)
N6: (56.621,-36.597,-53.554)
N7: (55.482,-38.139,-55.989)
N9: (55.148,-40.352,-55.823)
O5': (52.937,-40.335,-59.039)
O3': (51.178,-42.524,-56.061)
OP2: (52.751,-38.055,-60.044)
C3': (52.395,-41.841,-56.363)
C1': (54.744,-41.729,-56.115)
C5': (52.560,-41.704,-58.951)
O4': (54.444,-41.866,-57.493)
C8: (55.067,-39.224,-56.598)
O2': (53.623,-43.421,-54.858)
C6: (56.400,-37.919,-53.603)
C5: (55.873,-38.587,-54.733)
C4: (55.683,-39.947,-54.620)
P: (52.671,-39.496,-60.365)
C4': (53.067,-42.297,-57.657)
C2': (53.489,-42.090,-55.325)
C2: (56.450,-39.976,-52.551)
N1: (56.689,-38.663,-52.510)
N3: (55.951,-40.711,-53.541)
N6: (56.621,-36.597,-53.554)
N7: (55.482,-38.139,-55.989)
N9: (55.148,-40.352,-55.823)
O5': (52.937,-40.335,-59.039)
O3': (51.178,-42.524,-56.061)
OP1: (58.201,-26.681,-60.333)
OP2: (55.873,-27.492,-61.046)
C3': (58.120,-31.399,-58.259)
C1': (56.026,-31.843,-57.237)
C5': (57.852,-28.818,-58.062)
O6: (52.400,-33.816,-61.577)
O4': (56.299,-30.453,-57.119)
C8: (54.439,-31.038,-59.043)
C2: (54.229,-35.386,-58.946)
C6: (53.121,-33.909,-60.561)
C5: (53.717,-32.877,-59.811)
C4: (54.513,-33.211,-58.735)
P: (56.884,-27.286,-59.985)
C4': (57.692,-30.196,-57.434)
C2': (57.333,-32.538,-57.627)
O2': (57.959,-33.081,-56.493)
N1: (53.439,-35.160,-60.043)
N2: (54.399,-36.670,-58.599)
N3: (54.804,-34.430,-58.246)
N7: (53.667,-31.506,-59.980)
N9: (55.018,-32.021,-58.277)
O5': (57.089,-28.702,-59.268)
O3': (59.522,-31.633,-58.193)
OP2: (55.873,-27.492,-61.046)
C3': (58.120,-31.399,-58.259)
C1': (56.026,-31.843,-57.237)
C5': (57.852,-28.818,-58.062)
O6: (52.400,-33.816,-61.577)
O4': (56.299,-30.453,-57.119)
C8: (54.439,-31.038,-59.043)
C2: (54.229,-35.386,-58.946)
C6: (53.121,-33.909,-60.561)
C5: (53.717,-32.877,-59.811)
C4: (54.513,-33.211,-58.735)
P: (56.884,-27.286,-59.985)
C4': (57.692,-30.196,-57.434)
C2': (57.333,-32.538,-57.627)
O2': (57.959,-33.081,-56.493)
N1: (53.439,-35.160,-60.043)
N2: (54.399,-36.670,-58.599)
N3: (54.804,-34.430,-58.246)
N7: (53.667,-31.506,-59.980)
N9: (55.018,-32.021,-58.277)
O5': (57.089,-28.702,-59.268)
O3': (59.522,-31.633,-58.193)
Image (generated by PyMOL):