Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1937:1938
Extra
PDB:
ATOM 1 O3' A A 936 37.821 -52.492 32.979 1.00 45.60 O
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' G B 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 2 P G B 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 3 OP1 G B 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 4 OP2 G B 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 5 O5' G B 938 32.100 -46.088 33.142 1.00 42.58 O
ATOM 6 C5' G B 938 32.350 -44.700 33.248 1.00 42.21 C
ATOM 7 C4' G B 938 31.910 -43.961 32.012 1.00 42.35 C
ATOM 8 O4' G B 938 32.715 -44.402 30.891 1.00 42.67 O
ATOM 9 C3' G B 938 30.458 -44.170 31.610 1.00 42.59 C
ATOM 10 O3' G B 938 29.940 -42.955 31.099 1.00 42.47 O
ATOM 11 C2' G B 938 30.545 -45.211 30.493 1.00 43.09 C
ATOM 12 O2' G B 938 29.530 -45.096 29.524 1.00 43.37 O
ATOM 13 C1' G B 938 31.909 -44.935 29.877 1.00 43.09 C
ATOM 14 N9 G B 938 32.584 -46.116 29.392 1.00 43.45 N
ATOM 15 C8 G B 938 32.705 -47.272 30.071 1.00 43.56 C
ATOM 16 N7 G B 938 33.426 -48.112 29.399 1.00 43.90 N
ATOM 17 C5 G B 938 33.825 -47.461 28.235 1.00 44.00 C
ATOM 18 C6 G B 938 34.647 -47.849 27.120 1.00 44.35 C
ATOM 19 O6 G B 938 35.205 -48.921 26.896 1.00 44.65 O
ATOM 20 N1 G B 938 34.816 -46.875 26.149 1.00 44.35 N
ATOM 21 C2 G B 938 34.259 -45.651 26.262 1.00 44.04 C
ATOM 22 N2 G B 938 34.533 -44.838 25.244 1.00 44.11 N
ATOM 23 N3 G B 938 33.505 -45.261 27.285 1.00 43.72 N
ATOM 24 C4 G B 938 33.309 -46.211 28.228 1.00 43.72 C
ATOM 25 P U B 939 29.344 -41.861 32.108 1.00 48.37 P
ATOM 26 OP1 U B 939 29.524 -42.383 33.473 1.00 48.16 O
ATOM 27 OP2 U B 939 27.976 -41.533 31.657 1.00 48.51 O
ATOM 28 O5' U B 939 30.284 -40.619 31.868 1.00 48.09 O
TER
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' G B 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 2 P G B 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 3 OP1 G B 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 4 OP2 G B 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 5 O5' G B 938 32.100 -46.088 33.142 1.00 42.58 O
ATOM 6 C5' G B 938 32.350 -44.700 33.248 1.00 42.21 C
ATOM 7 C4' G B 938 31.910 -43.961 32.012 1.00 42.35 C
ATOM 8 O4' G B 938 32.715 -44.402 30.891 1.00 42.67 O
ATOM 9 C3' G B 938 30.458 -44.170 31.610 1.00 42.59 C
ATOM 10 O3' G B 938 29.940 -42.955 31.099 1.00 42.47 O
ATOM 11 C2' G B 938 30.545 -45.211 30.493 1.00 43.09 C
ATOM 12 O2' G B 938 29.530 -45.096 29.524 1.00 43.37 O
ATOM 13 C1' G B 938 31.909 -44.935 29.877 1.00 43.09 C
ATOM 14 N9 G B 938 32.584 -46.116 29.392 1.00 43.45 N
ATOM 15 C8 G B 938 32.705 -47.272 30.071 1.00 43.56 C
ATOM 16 N7 G B 938 33.426 -48.112 29.399 1.00 43.90 N
ATOM 17 C5 G B 938 33.825 -47.461 28.235 1.00 44.00 C
ATOM 18 C6 G B 938 34.647 -47.849 27.120 1.00 44.35 C
ATOM 19 O6 G B 938 35.205 -48.921 26.896 1.00 44.65 O
ATOM 20 N1 G B 938 34.816 -46.875 26.149 1.00 44.35 N
ATOM 21 C2 G B 938 34.259 -45.651 26.262 1.00 44.04 C
ATOM 22 N2 G B 938 34.533 -44.838 25.244 1.00 44.11 N
ATOM 23 N3 G B 938 33.505 -45.261 27.285 1.00 43.72 N
ATOM 24 C4 G B 938 33.309 -46.211 28.228 1.00 43.72 C
ATOM 25 P U B 939 29.344 -41.861 32.108 1.00 48.37 P
ATOM 26 OP1 U B 939 29.524 -42.383 33.473 1.00 48.16 O
ATOM 27 OP2 U B 939 27.976 -41.533 31.657 1.00 48.51 O
ATOM 28 O5' U B 939 30.284 -40.619 31.868 1.00 48.09 O
TER
Atoms:
OP1: (35.374,-52.298,33.332)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
OP1: (33.170,-46.939,35.268)
OP2: (32.767,-48.484,33.282)
C3': (30.458,-44.170,31.610)
C1': (31.909,-44.935,29.877)
C5': (32.350,-44.700,33.248)
O6: (35.205,-48.921,26.896)
O4': (32.715,-44.402,30.891)
C8: (32.705,-47.272,30.071)
C2: (34.259,-45.651,26.262)
C6: (34.647,-47.849,27.120)
C5: (33.825,-47.461,28.235)
C4: (33.309,-46.211,28.228)
P: (33.089,-47.140,33.786)
C4': (31.910,-43.961,32.012)
C2': (30.545,-45.211,30.493)
O2': (29.530,-45.096,29.524)
N1: (34.816,-46.875,26.149)
N2: (34.533,-44.838,25.244)
N3: (33.505,-45.261,27.285)
N7: (33.426,-48.112,29.399)
N9: (32.584,-46.116,29.392)
O5': (32.100,-46.088,33.142)
O3': (29.940,-42.955,31.099)
OP2: (32.767,-48.484,33.282)
C3': (30.458,-44.170,31.610)
C1': (31.909,-44.935,29.877)
C5': (32.350,-44.700,33.248)
O6: (35.205,-48.921,26.896)
O4': (32.715,-44.402,30.891)
C8: (32.705,-47.272,30.071)
C2: (34.259,-45.651,26.262)
C6: (34.647,-47.849,27.120)
C5: (33.825,-47.461,28.235)
C4: (33.309,-46.211,28.228)
P: (33.089,-47.140,33.786)
C4': (31.910,-43.961,32.012)
C2': (30.545,-45.211,30.493)
O2': (29.530,-45.096,29.524)
N1: (34.816,-46.875,26.149)
N2: (34.533,-44.838,25.244)
N3: (33.505,-45.261,27.285)
N7: (33.426,-48.112,29.399)
N9: (32.584,-46.116,29.392)
O5': (32.100,-46.088,33.142)
O3': (29.940,-42.955,31.099)
Image (generated by PyMOL):