Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YFG:A16:A17
Extra
PDB:
ATOM 1 P G A 16 0.097 15.393 -36.306 1.00 29.37 P
ATOM 2 OP1 G A 16 0.807 14.635 -37.330 1.00 29.55 O
ATOM 3 OP2 G A 16 0.540 15.295 -34.872 1.00 29.69 O
ATOM 4 O5' G A 16 0.045 16.959 -36.702 1.00 28.42 O
ATOM 5 C5' G A 16 0.307 16.939 -38.136 1.00 27.02 C
ATOM 6 C4' G A 16 1.677 17.540 -38.299 1.00 25.70 C
ATOM 7 O4' G A 16 2.667 16.969 -37.494 1.00 24.67 O
ATOM 8 C3' G A 16 2.161 17.471 -39.747 1.00 25.40 C
ATOM 9 O3' G A 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 10 C2' G A 16 3.184 16.388 -39.638 1.00 24.87 C
ATOM 11 O2' G A 16 3.997 16.319 -40.757 1.00 24.93 O
ATOM 12 C1' G A 16 3.827 16.713 -38.286 1.00 23.87 C
ATOM 13 N9 G A 16 4.680 15.570 -37.958 1.00 22.96 N
ATOM 14 C8 G A 16 4.333 14.241 -37.985 1.00 22.59 C
ATOM 15 N7 G A 16 5.299 13.433 -37.671 1.00 22.47 N
ATOM 16 C5 G A 16 6.357 14.280 -37.398 1.00 22.30 C
ATOM 17 C6 G A 16 7.693 13.995 -37.002 1.00 22.28 C
ATOM 18 O6 G A 16 8.188 12.882 -36.798 1.00 22.55 O
ATOM 19 N1 G A 16 8.472 15.088 -36.838 1.00 22.12 N
ATOM 20 C2 G A 16 8.006 16.348 -37.043 1.00 22.35 C
ATOM 21 N2 G A 16 8.921 17.323 -36.838 1.00 22.57 N
ATOM 22 N3 G A 16 6.778 16.664 -37.412 1.00 22.47 N
ATOM 23 C4 G A 16 6.004 15.580 -37.576 1.00 22.43 C
ATOM 24 P G A 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 25 OP1 G A 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 26 OP2 G A 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 27 O5' G A 17 2.320 20.662 -41.658 1.00 26.62 O
TER
ATOM 1 O3' G B 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 2 P G B 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 3 OP1 G B 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 4 OP2 G B 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 5 O5' G B 17 2.320 20.662 -41.658 1.00 26.62 O
ATOM 6 C5' G B 17 3.457 21.056 -40.866 1.00 27.82 C
ATOM 7 C4' G B 17 4.276 22.080 -41.686 1.00 28.88 C
ATOM 8 O4' G B 17 5.240 21.284 -42.349 1.00 28.61 O
ATOM 9 C3' G B 17 3.457 22.789 -42.737 1.00 30.09 C
ATOM 10 O3' G B 17 3.986 24.106 -42.941 1.00 32.68 O
ATOM 11 C2' G B 17 3.639 21.843 -43.921 1.00 29.34 C
ATOM 12 O2' G B 17 3.514 22.550 -45.141 1.00 29.72 O
ATOM 13 C1' G B 17 5.112 21.420 -43.747 1.00 28.04 C
ATOM 14 N9 G B 17 5.186 19.953 -44.020 1.00 27.00 N
ATOM 15 C8 G B 17 4.147 19.086 -44.281 1.00 26.68 C
ATOM 16 N7 G B 17 4.513 17.847 -44.473 1.00 26.55 N
ATOM 17 C5 G B 17 5.893 17.893 -44.331 1.00 26.42 C
ATOM 18 C6 G B 17 6.828 16.851 -44.428 1.00 26.47 C
ATOM 19 O6 G B 17 6.641 15.679 -44.649 1.00 26.65 O
ATOM 20 N1 G B 17 8.124 17.302 -44.228 1.00 26.29 N
ATOM 21 C2 G B 17 8.462 18.615 -43.966 1.00 26.24 C
ATOM 22 N2 G B 17 9.751 18.820 -43.816 1.00 26.26 N
ATOM 23 N3 G B 17 7.585 19.598 -43.870 1.00 26.33 N
ATOM 24 C4 G B 17 6.313 19.156 -44.064 1.00 26.43 C
ATOM 25 P A B 18 3.338 25.414 -42.286 1.00 35.16 P
ATOM 26 OP1 A B 18 2.015 25.668 -42.910 1.00 35.16 O
ATOM 27 OP2 A B 18 4.343 26.505 -42.358 1.00 35.07 O
ATOM 28 O5' A B 18 3.128 24.979 -40.757 1.00 36.64 O
TER
ATOM 2 OP1 G A 16 0.807 14.635 -37.330 1.00 29.55 O
ATOM 3 OP2 G A 16 0.540 15.295 -34.872 1.00 29.69 O
ATOM 4 O5' G A 16 0.045 16.959 -36.702 1.00 28.42 O
ATOM 5 C5' G A 16 0.307 16.939 -38.136 1.00 27.02 C
ATOM 6 C4' G A 16 1.677 17.540 -38.299 1.00 25.70 C
ATOM 7 O4' G A 16 2.667 16.969 -37.494 1.00 24.67 O
ATOM 8 C3' G A 16 2.161 17.471 -39.747 1.00 25.40 C
ATOM 9 O3' G A 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 10 C2' G A 16 3.184 16.388 -39.638 1.00 24.87 C
ATOM 11 O2' G A 16 3.997 16.319 -40.757 1.00 24.93 O
ATOM 12 C1' G A 16 3.827 16.713 -38.286 1.00 23.87 C
ATOM 13 N9 G A 16 4.680 15.570 -37.958 1.00 22.96 N
ATOM 14 C8 G A 16 4.333 14.241 -37.985 1.00 22.59 C
ATOM 15 N7 G A 16 5.299 13.433 -37.671 1.00 22.47 N
ATOM 16 C5 G A 16 6.357 14.280 -37.398 1.00 22.30 C
ATOM 17 C6 G A 16 7.693 13.995 -37.002 1.00 22.28 C
ATOM 18 O6 G A 16 8.188 12.882 -36.798 1.00 22.55 O
ATOM 19 N1 G A 16 8.472 15.088 -36.838 1.00 22.12 N
ATOM 20 C2 G A 16 8.006 16.348 -37.043 1.00 22.35 C
ATOM 21 N2 G A 16 8.921 17.323 -36.838 1.00 22.57 N
ATOM 22 N3 G A 16 6.778 16.664 -37.412 1.00 22.47 N
ATOM 23 C4 G A 16 6.004 15.580 -37.576 1.00 22.43 C
ATOM 24 P G A 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 25 OP1 G A 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 26 OP2 G A 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 27 O5' G A 17 2.320 20.662 -41.658 1.00 26.62 O
TER
ATOM 1 O3' G B 16 2.650 18.732 -40.225 1.00 25.74 O
ATOM 2 P G B 17 1.408 19.474 -41.104 1.00 26.00 P
ATOM 3 OP1 G B 17 0.355 19.922 -40.152 1.00 26.10 O
ATOM 4 OP2 G B 17 0.881 18.319 -41.861 1.00 25.92 O
ATOM 5 O5' G B 17 2.320 20.662 -41.658 1.00 26.62 O
ATOM 6 C5' G B 17 3.457 21.056 -40.866 1.00 27.82 C
ATOM 7 C4' G B 17 4.276 22.080 -41.686 1.00 28.88 C
ATOM 8 O4' G B 17 5.240 21.284 -42.349 1.00 28.61 O
ATOM 9 C3' G B 17 3.457 22.789 -42.737 1.00 30.09 C
ATOM 10 O3' G B 17 3.986 24.106 -42.941 1.00 32.68 O
ATOM 11 C2' G B 17 3.639 21.843 -43.921 1.00 29.34 C
ATOM 12 O2' G B 17 3.514 22.550 -45.141 1.00 29.72 O
ATOM 13 C1' G B 17 5.112 21.420 -43.747 1.00 28.04 C
ATOM 14 N9 G B 17 5.186 19.953 -44.020 1.00 27.00 N
ATOM 15 C8 G B 17 4.147 19.086 -44.281 1.00 26.68 C
ATOM 16 N7 G B 17 4.513 17.847 -44.473 1.00 26.55 N
ATOM 17 C5 G B 17 5.893 17.893 -44.331 1.00 26.42 C
ATOM 18 C6 G B 17 6.828 16.851 -44.428 1.00 26.47 C
ATOM 19 O6 G B 17 6.641 15.679 -44.649 1.00 26.65 O
ATOM 20 N1 G B 17 8.124 17.302 -44.228 1.00 26.29 N
ATOM 21 C2 G B 17 8.462 18.615 -43.966 1.00 26.24 C
ATOM 22 N2 G B 17 9.751 18.820 -43.816 1.00 26.26 N
ATOM 23 N3 G B 17 7.585 19.598 -43.870 1.00 26.33 N
ATOM 24 C4 G B 17 6.313 19.156 -44.064 1.00 26.43 C
ATOM 25 P A B 18 3.338 25.414 -42.286 1.00 35.16 P
ATOM 26 OP1 A B 18 2.015 25.668 -42.910 1.00 35.16 O
ATOM 27 OP2 A B 18 4.343 26.505 -42.358 1.00 35.07 O
ATOM 28 O5' A B 18 3.128 24.979 -40.757 1.00 36.64 O
TER
Atoms:
OP1: (0.807,14.635,-37.330)
OP2: (0.540,15.295,-34.872)
C3': (2.161,17.471,-39.747)
C1': (3.827,16.713,-38.286)
C5': (0.307,16.939,-38.136)
O6: (8.188,12.882,-36.798)
O4': (2.667,16.969,-37.494)
C8: (4.333,14.241,-37.985)
C2: (8.006,16.348,-37.043)
C6: (7.693,13.995,-37.002)
C5: (6.357,14.280,-37.398)
C4: (6.004,15.580,-37.576)
P: (0.097,15.393,-36.306)
C4': (1.677,17.540,-38.299)
C2': (3.184,16.388,-39.638)
O2': (3.997,16.319,-40.757)
N1: (8.472,15.088,-36.838)
N2: (8.921,17.323,-36.838)
N3: (6.778,16.664,-37.412)
N7: (5.299,13.433,-37.671)
N9: (4.680,15.570,-37.958)
O5': (0.045,16.959,-36.702)
O3': (2.650,18.732,-40.225)
OP2: (0.540,15.295,-34.872)
C3': (2.161,17.471,-39.747)
C1': (3.827,16.713,-38.286)
C5': (0.307,16.939,-38.136)
O6: (8.188,12.882,-36.798)
O4': (2.667,16.969,-37.494)
C8: (4.333,14.241,-37.985)
C2: (8.006,16.348,-37.043)
C6: (7.693,13.995,-37.002)
C5: (6.357,14.280,-37.398)
C4: (6.004,15.580,-37.576)
P: (0.097,15.393,-36.306)
C4': (1.677,17.540,-38.299)
C2': (3.184,16.388,-39.638)
O2': (3.997,16.319,-40.757)
N1: (8.472,15.088,-36.838)
N2: (8.921,17.323,-36.838)
N3: (6.778,16.664,-37.412)
N7: (5.299,13.433,-37.671)
N9: (4.680,15.570,-37.958)
O5': (0.045,16.959,-36.702)
O3': (2.650,18.732,-40.225)
OP1: (0.355,19.922,-40.152)
OP2: (0.881,18.319,-41.861)
C3': (3.457,22.789,-42.737)
C1': (5.112,21.420,-43.747)
C5': (3.457,21.056,-40.866)
O6: (6.641,15.679,-44.649)
O4': (5.240,21.284,-42.349)
C8: (4.147,19.086,-44.281)
C2: (8.462,18.615,-43.966)
C6: (6.828,16.851,-44.428)
C5: (5.893,17.893,-44.331)
C4: (6.313,19.156,-44.064)
P: (1.408,19.474,-41.104)
C4': (4.276,22.080,-41.686)
C2': (3.639,21.843,-43.921)
O2': (3.514,22.550,-45.141)
N1: (8.124,17.302,-44.228)
N2: (9.751,18.820,-43.816)
N3: (7.585,19.598,-43.870)
N7: (4.513,17.847,-44.473)
N9: (5.186,19.953,-44.020)
O5': (2.320,20.662,-41.658)
O3': (3.986,24.106,-42.941)
OP2: (0.881,18.319,-41.861)
C3': (3.457,22.789,-42.737)
C1': (5.112,21.420,-43.747)
C5': (3.457,21.056,-40.866)
O6: (6.641,15.679,-44.649)
O4': (5.240,21.284,-42.349)
C8: (4.147,19.086,-44.281)
C2: (8.462,18.615,-43.966)
C6: (6.828,16.851,-44.428)
C5: (5.893,17.893,-44.331)
C4: (6.313,19.156,-44.064)
P: (1.408,19.474,-41.104)
C4': (4.276,22.080,-41.686)
C2': (3.639,21.843,-43.921)
O2': (3.514,22.550,-45.141)
N1: (8.124,17.302,-44.228)
N2: (9.751,18.820,-43.816)
N3: (7.585,19.598,-43.870)
N7: (4.513,17.847,-44.473)
N9: (5.186,19.953,-44.020)
O5': (2.320,20.662,-41.658)
O3': (3.986,24.106,-42.941)
Image (generated by PyMOL):