Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AM1:B19:B20
Extra
PDB:
ATOM 1 O3' U A 18 12.115 -9.616 31.308 1.00 62.35 O
ATOM 2 P G A 19 13.671 -9.207 31.331 1.00 83.67 P
ATOM 3 OP1 G A 19 14.384 -10.489 31.560 1.00 79.53 O
ATOM 4 OP2 G A 19 13.854 -8.067 32.270 1.00 74.87 O
ATOM 5 O5' G A 19 13.963 -8.702 29.853 1.00 79.91 O
ATOM 6 C5' G A 19 15.192 -8.041 29.564 1.00 76.20 C
ATOM 7 C4' G A 19 15.236 -7.616 28.122 1.00 70.00 C
ATOM 8 O4' G A 19 16.531 -7.040 27.803 1.00 65.30 O
ATOM 9 C3' G A 19 15.028 -8.759 27.136 1.00 62.18 C
ATOM 10 O3' G A 19 14.364 -8.230 25.997 1.00 55.30 O
ATOM 11 C2' G A 19 16.458 -9.121 26.766 1.00 64.17 C
ATOM 12 O2' G A 19 16.581 -9.840 25.562 1.00 76.09 O
ATOM 13 C1' G A 19 17.062 -7.725 26.685 1.00 68.92 C
ATOM 14 N9 G A 19 18.520 -7.630 26.746 1.00 79.26 N
ATOM 15 C8 G A 19 19.386 -8.324 27.553 1.00 82.33 C
ATOM 16 N7 G A 19 20.638 -7.992 27.371 1.00 82.45 N
ATOM 17 C5 G A 19 20.589 -7.012 26.390 1.00 85.46 C
ATOM 18 C6 G A 19 21.636 -6.275 25.784 1.00 88.48 C
ATOM 19 O6 G A 19 22.850 -6.344 26.004 1.00 88.03 O
ATOM 20 N1 G A 19 21.145 -5.386 24.834 1.00 89.66 N
ATOM 21 C2 G A 19 19.822 -5.228 24.510 1.00 83.68 C
ATOM 22 N2 G A 19 19.560 -4.316 23.568 1.00 80.76 N
ATOM 23 N3 G A 19 18.834 -5.909 25.064 1.00 82.13 N
ATOM 24 C4 G A 19 19.290 -6.778 25.992 1.00 82.69 C
ATOM 25 P G A 20 12.803 -8.493 25.717 1.00 75.90 P
ATOM 26 OP1 G A 20 11.977 -7.430 26.363 1.00 56.95 O
ATOM 27 OP2 G A 20 12.579 -9.936 26.029 1.00 66.72 O
ATOM 28 O5' G A 20 12.777 -8.255 24.140 1.00 89.39 O
TER
ATOM 1 O3' G B 19 14.364 -8.230 25.997 1.00 55.30 O
ATOM 2 P G B 20 12.803 -8.493 25.717 1.00 75.90 P
ATOM 3 OP1 G B 20 11.977 -7.430 26.363 1.00 56.95 O
ATOM 4 OP2 G B 20 12.579 -9.936 26.029 1.00 66.72 O
ATOM 5 O5' G B 20 12.777 -8.255 24.140 1.00 89.39 O
ATOM 6 C5' G B 20 12.705 -6.945 23.579 1.00 80.35 C
ATOM 7 C4' G B 20 12.394 -7.006 22.108 1.00 68.13 C
ATOM 8 O4' G B 20 13.463 -7.735 21.457 1.00 65.83 O
ATOM 9 C3' G B 20 11.120 -7.776 21.790 1.00 69.84 C
ATOM 10 O3' G B 20 10.544 -7.279 20.586 1.00 68.26 O
ATOM 11 C2' G B 20 11.634 -9.195 21.576 1.00 68.29 C
ATOM 12 O2' G B 20 10.782 -10.017 20.815 1.00 68.28 O
ATOM 13 C1' G B 20 12.964 -8.932 20.887 1.00 65.77 C
ATOM 14 N9 G B 20 13.962 -9.969 21.138 1.00 76.70 N
ATOM 15 C8 G B 20 13.887 -11.052 21.980 1.00 85.84 C
ATOM 16 N7 G B 20 14.978 -11.773 21.975 1.00 86.57 N
ATOM 17 C5 G B 20 15.819 -11.127 21.077 1.00 84.22 C
ATOM 18 C6 G B 20 17.141 -11.422 20.639 1.00 85.73 C
ATOM 19 O6 G B 20 17.885 -12.361 20.956 1.00 96.49 O
ATOM 20 N1 G B 20 17.599 -10.477 19.730 1.00 72.45 N
ATOM 21 C2 G B 20 16.886 -9.391 19.292 1.00 69.72 C
ATOM 22 N2 G B 20 17.485 -8.580 18.412 1.00 73.61 N
ATOM 23 N3 G B 20 15.663 -9.112 19.682 1.00 69.03 N
ATOM 24 C4 G B 20 15.199 -10.014 20.561 1.00 75.51 C
ATOM 25 P U B 21 9.659 -5.941 20.647 1.00 67.23 P
ATOM 26 OP1 U B 21 9.347 -5.628 22.063 1.00 75.02 O
ATOM 27 OP2 U B 21 8.516 -6.110 19.715 1.00 59.51 O
ATOM 28 O5' U B 21 10.742 -4.898 20.149 1.00 64.42 O
TER
ATOM 2 P G A 19 13.671 -9.207 31.331 1.00 83.67 P
ATOM 3 OP1 G A 19 14.384 -10.489 31.560 1.00 79.53 O
ATOM 4 OP2 G A 19 13.854 -8.067 32.270 1.00 74.87 O
ATOM 5 O5' G A 19 13.963 -8.702 29.853 1.00 79.91 O
ATOM 6 C5' G A 19 15.192 -8.041 29.564 1.00 76.20 C
ATOM 7 C4' G A 19 15.236 -7.616 28.122 1.00 70.00 C
ATOM 8 O4' G A 19 16.531 -7.040 27.803 1.00 65.30 O
ATOM 9 C3' G A 19 15.028 -8.759 27.136 1.00 62.18 C
ATOM 10 O3' G A 19 14.364 -8.230 25.997 1.00 55.30 O
ATOM 11 C2' G A 19 16.458 -9.121 26.766 1.00 64.17 C
ATOM 12 O2' G A 19 16.581 -9.840 25.562 1.00 76.09 O
ATOM 13 C1' G A 19 17.062 -7.725 26.685 1.00 68.92 C
ATOM 14 N9 G A 19 18.520 -7.630 26.746 1.00 79.26 N
ATOM 15 C8 G A 19 19.386 -8.324 27.553 1.00 82.33 C
ATOM 16 N7 G A 19 20.638 -7.992 27.371 1.00 82.45 N
ATOM 17 C5 G A 19 20.589 -7.012 26.390 1.00 85.46 C
ATOM 18 C6 G A 19 21.636 -6.275 25.784 1.00 88.48 C
ATOM 19 O6 G A 19 22.850 -6.344 26.004 1.00 88.03 O
ATOM 20 N1 G A 19 21.145 -5.386 24.834 1.00 89.66 N
ATOM 21 C2 G A 19 19.822 -5.228 24.510 1.00 83.68 C
ATOM 22 N2 G A 19 19.560 -4.316 23.568 1.00 80.76 N
ATOM 23 N3 G A 19 18.834 -5.909 25.064 1.00 82.13 N
ATOM 24 C4 G A 19 19.290 -6.778 25.992 1.00 82.69 C
ATOM 25 P G A 20 12.803 -8.493 25.717 1.00 75.90 P
ATOM 26 OP1 G A 20 11.977 -7.430 26.363 1.00 56.95 O
ATOM 27 OP2 G A 20 12.579 -9.936 26.029 1.00 66.72 O
ATOM 28 O5' G A 20 12.777 -8.255 24.140 1.00 89.39 O
TER
ATOM 1 O3' G B 19 14.364 -8.230 25.997 1.00 55.30 O
ATOM 2 P G B 20 12.803 -8.493 25.717 1.00 75.90 P
ATOM 3 OP1 G B 20 11.977 -7.430 26.363 1.00 56.95 O
ATOM 4 OP2 G B 20 12.579 -9.936 26.029 1.00 66.72 O
ATOM 5 O5' G B 20 12.777 -8.255 24.140 1.00 89.39 O
ATOM 6 C5' G B 20 12.705 -6.945 23.579 1.00 80.35 C
ATOM 7 C4' G B 20 12.394 -7.006 22.108 1.00 68.13 C
ATOM 8 O4' G B 20 13.463 -7.735 21.457 1.00 65.83 O
ATOM 9 C3' G B 20 11.120 -7.776 21.790 1.00 69.84 C
ATOM 10 O3' G B 20 10.544 -7.279 20.586 1.00 68.26 O
ATOM 11 C2' G B 20 11.634 -9.195 21.576 1.00 68.29 C
ATOM 12 O2' G B 20 10.782 -10.017 20.815 1.00 68.28 O
ATOM 13 C1' G B 20 12.964 -8.932 20.887 1.00 65.77 C
ATOM 14 N9 G B 20 13.962 -9.969 21.138 1.00 76.70 N
ATOM 15 C8 G B 20 13.887 -11.052 21.980 1.00 85.84 C
ATOM 16 N7 G B 20 14.978 -11.773 21.975 1.00 86.57 N
ATOM 17 C5 G B 20 15.819 -11.127 21.077 1.00 84.22 C
ATOM 18 C6 G B 20 17.141 -11.422 20.639 1.00 85.73 C
ATOM 19 O6 G B 20 17.885 -12.361 20.956 1.00 96.49 O
ATOM 20 N1 G B 20 17.599 -10.477 19.730 1.00 72.45 N
ATOM 21 C2 G B 20 16.886 -9.391 19.292 1.00 69.72 C
ATOM 22 N2 G B 20 17.485 -8.580 18.412 1.00 73.61 N
ATOM 23 N3 G B 20 15.663 -9.112 19.682 1.00 69.03 N
ATOM 24 C4 G B 20 15.199 -10.014 20.561 1.00 75.51 C
ATOM 25 P U B 21 9.659 -5.941 20.647 1.00 67.23 P
ATOM 26 OP1 U B 21 9.347 -5.628 22.063 1.00 75.02 O
ATOM 27 OP2 U B 21 8.516 -6.110 19.715 1.00 59.51 O
ATOM 28 O5' U B 21 10.742 -4.898 20.149 1.00 64.42 O
TER
Atoms:
OP1: (14.384,-10.489,31.560)
OP2: (13.854,-8.067,32.270)
C3': (15.028,-8.759,27.136)
C1': (17.062,-7.725,26.685)
C5': (15.192,-8.041,29.564)
O6: (22.850,-6.344,26.004)
O4': (16.531,-7.040,27.803)
C8: (19.386,-8.324,27.553)
C2: (19.822,-5.228,24.510)
C6: (21.636,-6.275,25.784)
C5: (20.589,-7.012,26.390)
C4: (19.290,-6.778,25.992)
P: (13.671,-9.207,31.331)
C4': (15.236,-7.616,28.122)
C2': (16.458,-9.121,26.766)
O2': (16.581,-9.840,25.562)
N1: (21.145,-5.386,24.834)
N2: (19.560,-4.316,23.568)
N3: (18.834,-5.909,25.064)
N7: (20.638,-7.992,27.371)
N9: (18.520,-7.630,26.746)
O5': (13.963,-8.702,29.853)
O3': (14.364,-8.230,25.997)
OP2: (13.854,-8.067,32.270)
C3': (15.028,-8.759,27.136)
C1': (17.062,-7.725,26.685)
C5': (15.192,-8.041,29.564)
O6: (22.850,-6.344,26.004)
O4': (16.531,-7.040,27.803)
C8: (19.386,-8.324,27.553)
C2: (19.822,-5.228,24.510)
C6: (21.636,-6.275,25.784)
C5: (20.589,-7.012,26.390)
C4: (19.290,-6.778,25.992)
P: (13.671,-9.207,31.331)
C4': (15.236,-7.616,28.122)
C2': (16.458,-9.121,26.766)
O2': (16.581,-9.840,25.562)
N1: (21.145,-5.386,24.834)
N2: (19.560,-4.316,23.568)
N3: (18.834,-5.909,25.064)
N7: (20.638,-7.992,27.371)
N9: (18.520,-7.630,26.746)
O5': (13.963,-8.702,29.853)
O3': (14.364,-8.230,25.997)
OP1: (11.977,-7.430,26.363)
OP2: (12.579,-9.936,26.029)
C3': (11.120,-7.776,21.790)
C1': (12.964,-8.932,20.887)
C5': (12.705,-6.945,23.579)
O6: (17.885,-12.361,20.956)
O4': (13.463,-7.735,21.457)
C8: (13.887,-11.052,21.980)
C2: (16.886,-9.391,19.292)
C6: (17.141,-11.422,20.639)
C5: (15.819,-11.127,21.077)
C4: (15.199,-10.014,20.561)
P: (12.803,-8.493,25.717)
C4': (12.394,-7.006,22.108)
C2': (11.634,-9.195,21.576)
O2': (10.782,-10.017,20.815)
N1: (17.599,-10.477,19.730)
N2: (17.485,-8.580,18.412)
N3: (15.663,-9.112,19.682)
N7: (14.978,-11.773,21.975)
N9: (13.962,-9.969,21.138)
O5': (12.777,-8.255,24.140)
O3': (10.544,-7.279,20.586)
OP2: (12.579,-9.936,26.029)
C3': (11.120,-7.776,21.790)
C1': (12.964,-8.932,20.887)
C5': (12.705,-6.945,23.579)
O6: (17.885,-12.361,20.956)
O4': (13.463,-7.735,21.457)
C8: (13.887,-11.052,21.980)
C2: (16.886,-9.391,19.292)
C6: (17.141,-11.422,20.639)
C5: (15.819,-11.127,21.077)
C4: (15.199,-10.014,20.561)
P: (12.803,-8.493,25.717)
C4': (12.394,-7.006,22.108)
C2': (11.634,-9.195,21.576)
O2': (10.782,-10.017,20.815)
N1: (17.599,-10.477,19.730)
N2: (17.485,-8.580,18.412)
N3: (15.663,-9.112,19.682)
N7: (14.978,-11.773,21.975)
N9: (13.962,-9.969,21.138)
O5': (12.777,-8.255,24.140)
O3': (10.544,-7.279,20.586)
Image (generated by PyMOL):