Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11351:11348
Extra
PDB:
ATOM 1 O3' A A1350 78.002 -3.106 58.649 1.00 32.03 O
ATOM 2 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 3 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 4 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 5 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
ATOM 6 C5' A A1351 76.897 -3.675 61.373 1.00 31.78 C
ATOM 7 C4' A A1351 76.861 -4.764 62.385 1.00 31.76 C
ATOM 8 O4' A A1351 77.432 -5.967 61.816 1.00 31.84 O
ATOM 9 C3' A A1351 77.651 -4.515 63.646 1.00 31.90 C
ATOM 10 O3' A A1351 76.906 -3.787 64.573 1.00 31.81 O
ATOM 11 C2' A A1351 77.979 -5.921 64.126 1.00 31.95 C
ATOM 12 O2' A A1351 76.896 -6.437 64.844 1.00 31.79 O
ATOM 13 C1' A A1351 78.086 -6.709 62.817 1.00 31.95 C
ATOM 14 N9 A A1351 79.478 -6.932 62.380 1.00 32.17 N
ATOM 15 C8 A A1351 80.377 -5.936 62.066 1.00 32.32 C
ATOM 16 N7 A A1351 81.488 -6.417 61.646 1.00 32.50 N
ATOM 17 C5 A A1351 81.362 -7.796 61.671 1.00 32.49 C
ATOM 18 C6 A A1351 82.226 -8.836 61.330 1.00 32.65 C
ATOM 19 N6 A A1351 83.443 -8.677 60.856 1.00 32.87 N
ATOM 20 N1 A A1351 81.779 -10.081 61.467 1.00 32.60 N
ATOM 21 C2 A A1351 80.531 -10.301 61.885 1.00 32.39 C
ATOM 22 N3 A A1351 79.631 -9.390 62.225 1.00 32.22 N
ATOM 23 C4 A A1351 80.105 -8.136 62.089 1.00 32.28 C
ATOM 24 P G A1352 77.531 -2.582 65.455 1.00 32.08 P
ATOM 25 OP1 G A1352 76.571 -2.324 66.558 1.00 31.97 O
ATOM 26 OP2 G A1352 77.879 -1.475 64.531 1.00 32.15 O
ATOM 27 O5' G A1352 78.823 -3.219 66.051 1.00 32.29 O
TER
ATOM 1 O3' C B1347 90.907 -3.652 54.300 1.00 35.02 O
ATOM 2 P G B1348 89.806 -3.839 53.159 1.00 36.50 P
ATOM 3 OP1 G B1348 90.379 -4.787 52.165 1.00 36.66 O
ATOM 4 OP2 G B1348 89.399 -2.462 52.715 1.00 36.46 O
ATOM 5 O5' G B1348 88.624 -4.517 53.958 1.00 36.23 O
ATOM 6 C5' G B1348 88.829 -5.697 54.685 1.00 36.24 C
ATOM 7 C4' G B1348 87.609 -6.023 55.482 1.00 35.97 C
ATOM 8 O4' G B1348 87.434 -5.063 56.540 1.00 35.91 O
ATOM 9 C3' G B1348 86.284 -5.950 54.757 1.00 35.74 C
ATOM 10 O3' G B1348 86.075 -7.052 53.891 1.00 35.74 O
ATOM 11 C2' G B1348 85.313 -5.896 55.918 1.00 35.52 C
ATOM 12 O2' G B1348 85.103 -7.185 56.421 1.00 35.48 O
ATOM 13 C1' G B1348 86.103 -5.083 56.960 1.00 35.65 C
ATOM 14 N9 G B1348 85.611 -3.735 56.997 1.00 35.56 N
ATOM 15 C8 G B1348 86.039 -2.748 56.193 1.00 35.68 C
ATOM 16 N7 G B1348 85.338 -1.671 56.346 1.00 35.57 N
ATOM 17 C5 G B1348 84.353 -2.029 57.288 1.00 35.36 C
ATOM 18 C6 G B1348 83.263 -1.271 57.823 1.00 35.17 C
ATOM 19 O6 G B1348 82.916 -0.085 57.549 1.00 35.16 O
ATOM 20 N1 G B1348 82.547 -2.044 58.747 1.00 35.01 N
ATOM 21 C2 G B1348 82.830 -3.347 59.096 1.00 35.03 C
ATOM 22 N2 G B1348 82.002 -3.896 60.013 1.00 34.87 N
ATOM 23 N3 G B1348 83.825 -4.042 58.594 1.00 35.21 N
ATOM 24 C4 G B1348 84.523 -3.322 57.700 1.00 35.36 C
ATOM 25 P U B1349 85.646 -6.814 52.376 1.00 37.20 P
ATOM 26 OP1 U B1349 85.804 -8.116 51.671 1.00 37.28 O
ATOM 27 OP2 U B1349 86.379 -5.624 51.877 1.00 37.36 O
ATOM 28 O5' U B1349 84.108 -6.471 52.530 1.00 36.91 O
TER
ATOM 2 P A A1351 78.552 -2.300 59.917 1.00 32.07 P
ATOM 3 OP1 A A1351 77.753 -1.082 60.015 1.00 31.98 O
ATOM 4 OP2 A A1351 80.039 -2.163 59.774 1.00 32.31 O
ATOM 5 O5' A A1351 78.219 -3.271 61.118 1.00 31.99 O
ATOM 6 C5' A A1351 76.897 -3.675 61.373 1.00 31.78 C
ATOM 7 C4' A A1351 76.861 -4.764 62.385 1.00 31.76 C
ATOM 8 O4' A A1351 77.432 -5.967 61.816 1.00 31.84 O
ATOM 9 C3' A A1351 77.651 -4.515 63.646 1.00 31.90 C
ATOM 10 O3' A A1351 76.906 -3.787 64.573 1.00 31.81 O
ATOM 11 C2' A A1351 77.979 -5.921 64.126 1.00 31.95 C
ATOM 12 O2' A A1351 76.896 -6.437 64.844 1.00 31.79 O
ATOM 13 C1' A A1351 78.086 -6.709 62.817 1.00 31.95 C
ATOM 14 N9 A A1351 79.478 -6.932 62.380 1.00 32.17 N
ATOM 15 C8 A A1351 80.377 -5.936 62.066 1.00 32.32 C
ATOM 16 N7 A A1351 81.488 -6.417 61.646 1.00 32.50 N
ATOM 17 C5 A A1351 81.362 -7.796 61.671 1.00 32.49 C
ATOM 18 C6 A A1351 82.226 -8.836 61.330 1.00 32.65 C
ATOM 19 N6 A A1351 83.443 -8.677 60.856 1.00 32.87 N
ATOM 20 N1 A A1351 81.779 -10.081 61.467 1.00 32.60 N
ATOM 21 C2 A A1351 80.531 -10.301 61.885 1.00 32.39 C
ATOM 22 N3 A A1351 79.631 -9.390 62.225 1.00 32.22 N
ATOM 23 C4 A A1351 80.105 -8.136 62.089 1.00 32.28 C
ATOM 24 P G A1352 77.531 -2.582 65.455 1.00 32.08 P
ATOM 25 OP1 G A1352 76.571 -2.324 66.558 1.00 31.97 O
ATOM 26 OP2 G A1352 77.879 -1.475 64.531 1.00 32.15 O
ATOM 27 O5' G A1352 78.823 -3.219 66.051 1.00 32.29 O
TER
ATOM 1 O3' C B1347 90.907 -3.652 54.300 1.00 35.02 O
ATOM 2 P G B1348 89.806 -3.839 53.159 1.00 36.50 P
ATOM 3 OP1 G B1348 90.379 -4.787 52.165 1.00 36.66 O
ATOM 4 OP2 G B1348 89.399 -2.462 52.715 1.00 36.46 O
ATOM 5 O5' G B1348 88.624 -4.517 53.958 1.00 36.23 O
ATOM 6 C5' G B1348 88.829 -5.697 54.685 1.00 36.24 C
ATOM 7 C4' G B1348 87.609 -6.023 55.482 1.00 35.97 C
ATOM 8 O4' G B1348 87.434 -5.063 56.540 1.00 35.91 O
ATOM 9 C3' G B1348 86.284 -5.950 54.757 1.00 35.74 C
ATOM 10 O3' G B1348 86.075 -7.052 53.891 1.00 35.74 O
ATOM 11 C2' G B1348 85.313 -5.896 55.918 1.00 35.52 C
ATOM 12 O2' G B1348 85.103 -7.185 56.421 1.00 35.48 O
ATOM 13 C1' G B1348 86.103 -5.083 56.960 1.00 35.65 C
ATOM 14 N9 G B1348 85.611 -3.735 56.997 1.00 35.56 N
ATOM 15 C8 G B1348 86.039 -2.748 56.193 1.00 35.68 C
ATOM 16 N7 G B1348 85.338 -1.671 56.346 1.00 35.57 N
ATOM 17 C5 G B1348 84.353 -2.029 57.288 1.00 35.36 C
ATOM 18 C6 G B1348 83.263 -1.271 57.823 1.00 35.17 C
ATOM 19 O6 G B1348 82.916 -0.085 57.549 1.00 35.16 O
ATOM 20 N1 G B1348 82.547 -2.044 58.747 1.00 35.01 N
ATOM 21 C2 G B1348 82.830 -3.347 59.096 1.00 35.03 C
ATOM 22 N2 G B1348 82.002 -3.896 60.013 1.00 34.87 N
ATOM 23 N3 G B1348 83.825 -4.042 58.594 1.00 35.21 N
ATOM 24 C4 G B1348 84.523 -3.322 57.700 1.00 35.36 C
ATOM 25 P U B1349 85.646 -6.814 52.376 1.00 37.20 P
ATOM 26 OP1 U B1349 85.804 -8.116 51.671 1.00 37.28 O
ATOM 27 OP2 U B1349 86.379 -5.624 51.877 1.00 37.36 O
ATOM 28 O5' U B1349 84.108 -6.471 52.530 1.00 36.91 O
TER
Atoms:
OP1: (77.753,-1.082,60.015)
OP2: (80.039,-2.163,59.774)
C3': (77.651,-4.515,63.646)
C1': (78.086,-6.709,62.817)
C5': (76.897,-3.675,61.373)
O4': (77.432,-5.967,61.816)
C8: (80.377,-5.936,62.066)
O2': (76.896,-6.437,64.844)
C6: (82.226,-8.836,61.330)
C5: (81.362,-7.796,61.671)
C4: (80.105,-8.136,62.089)
P: (78.552,-2.300,59.917)
C4': (76.861,-4.764,62.385)
C2': (77.979,-5.921,64.126)
C2: (80.531,-10.301,61.885)
N1: (81.779,-10.081,61.467)
N3: (79.631,-9.390,62.225)
N6: (83.443,-8.677,60.856)
N7: (81.488,-6.417,61.646)
N9: (79.478,-6.932,62.380)
O5': (78.219,-3.271,61.118)
O3': (76.906,-3.787,64.573)
OP2: (80.039,-2.163,59.774)
C3': (77.651,-4.515,63.646)
C1': (78.086,-6.709,62.817)
C5': (76.897,-3.675,61.373)
O4': (77.432,-5.967,61.816)
C8: (80.377,-5.936,62.066)
O2': (76.896,-6.437,64.844)
C6: (82.226,-8.836,61.330)
C5: (81.362,-7.796,61.671)
C4: (80.105,-8.136,62.089)
P: (78.552,-2.300,59.917)
C4': (76.861,-4.764,62.385)
C2': (77.979,-5.921,64.126)
C2: (80.531,-10.301,61.885)
N1: (81.779,-10.081,61.467)
N3: (79.631,-9.390,62.225)
N6: (83.443,-8.677,60.856)
N7: (81.488,-6.417,61.646)
N9: (79.478,-6.932,62.380)
O5': (78.219,-3.271,61.118)
O3': (76.906,-3.787,64.573)
OP1: (90.379,-4.787,52.165)
OP2: (89.399,-2.462,52.715)
C3': (86.284,-5.950,54.757)
C1': (86.103,-5.083,56.960)
C5': (88.829,-5.697,54.685)
O6: (82.916,-0.085,57.549)
O4': (87.434,-5.063,56.540)
C8: (86.039,-2.748,56.193)
C2: (82.830,-3.347,59.096)
C6: (83.263,-1.271,57.823)
C5: (84.353,-2.029,57.288)
C4: (84.523,-3.322,57.700)
P: (89.806,-3.839,53.159)
C4': (87.609,-6.023,55.482)
C2': (85.313,-5.896,55.918)
O2': (85.103,-7.185,56.421)
N1: (82.547,-2.044,58.747)
N2: (82.002,-3.896,60.013)
N3: (83.825,-4.042,58.594)
N7: (85.338,-1.671,56.346)
N9: (85.611,-3.735,56.997)
O5': (88.624,-4.517,53.958)
O3': (86.075,-7.052,53.891)
OP2: (89.399,-2.462,52.715)
C3': (86.284,-5.950,54.757)
C1': (86.103,-5.083,56.960)
C5': (88.829,-5.697,54.685)
O6: (82.916,-0.085,57.549)
O4': (87.434,-5.063,56.540)
C8: (86.039,-2.748,56.193)
C2: (82.830,-3.347,59.096)
C6: (83.263,-1.271,57.823)
C5: (84.353,-2.029,57.288)
C4: (84.523,-3.322,57.700)
P: (89.806,-3.839,53.159)
C4': (87.609,-6.023,55.482)
C2': (85.313,-5.896,55.918)
O2': (85.103,-7.185,56.421)
N1: (82.547,-2.044,58.747)
N2: (82.002,-3.896,60.013)
N3: (83.825,-4.042,58.594)
N7: (85.338,-1.671,56.346)
N9: (85.611,-3.735,56.997)
O5': (88.624,-4.517,53.958)
O3': (86.075,-7.052,53.891)
Image (generated by PyMOL):