ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A396:A401

Extra

PDB:
ATOM 1 O3' A A 395 99.593 93.469 19.436 1.00 72.00 O
ATOM 2 P A A 396 99.562 94.038 17.931 1.00 73.43 P
ATOM 3 OP1 A A 396 100.832 93.592 17.284 1.00 73.84 O
ATOM 4 OP2 A A 396 99.234 95.493 17.976 1.00 72.07 O
ATOM 5 O5' A A 396 98.336 93.263 17.260 1.00 72.48 O
ATOM 6 C5' A A 396 98.312 91.816 17.155 1.00 72.51 C
ATOM 7 C4' A A 396 96.931 91.348 16.739 1.00 73.34 C
ATOM 8 O4' A A 396 95.959 91.868 17.684 1.00 73.24 O
ATOM 9 C3' A A 396 96.453 91.880 15.399 1.00 74.90 C
ATOM 10 O3' A A 396 96.944 91.099 14.321 1.00 76.84 O
ATOM 11 C2' A A 396 94.934 91.854 15.542 1.00 74.06 C
ATOM 12 O2' A A 396 94.345 90.574 15.369 1.00 73.51 O
ATOM 13 C1' A A 396 94.776 92.271 17.006 1.00 72.95 C
ATOM 14 N9 A A 396 94.588 93.716 17.214 1.00 71.84 N
ATOM 15 C8 A A 396 95.545 94.666 17.484 1.00 71.29 C
ATOM 16 N7 A A 396 95.067 95.882 17.606 1.00 70.41 N
ATOM 17 C5 A A 396 93.705 95.729 17.404 1.00 70.24 C
ATOM 18 C6 A A 396 92.636 96.650 17.402 1.00 70.39 C
ATOM 19 N6 A A 396 92.780 97.969 17.578 1.00 69.16 N
ATOM 20 N1 A A 396 91.389 96.160 17.201 1.00 70.96 N
ATOM 21 C2 A A 396 91.237 94.843 16.998 1.00 69.94 C
ATOM 22 N3 A A 396 92.162 93.885 16.959 1.00 70.90 N
ATOM 23 C4 A A 396 93.391 94.398 17.172 1.00 70.97 C
ATOM 24 P U A 397 97.563 91.830 13.032 1.00 78.39 P
ATOM 25 OP1 U A 397 98.341 90.758 12.359 1.00 79.12 O
ATOM 26 OP2 U A 397 98.232 93.117 13.400 1.00 78.38 O
ATOM 27 O5' U A 397 96.301 92.201 12.138 1.00 78.31 O
TER

ATOM 1 O3' C B 400 92.240 88.368 15.351 1.00 75.08 O
ATOM 2 P G B 401 91.462 87.727 16.619 1.00 75.57 P
ATOM 3 OP1 G B 401 92.424 87.452 17.741 1.00 75.10 O
ATOM 4 OP2 G B 401 90.581 86.634 16.124 1.00 74.29 O
ATOM 5 O5' G B 401 90.486 88.901 17.088 1.00 73.64 O
ATOM 6 C5' G B 401 91.009 90.188 17.491 1.00 69.77 C
ATOM 7 C4' G B 401 89.877 91.164 17.733 1.00 66.94 C
ATOM 8 O4' G B 401 89.131 91.363 16.502 1.00 67.63 O
ATOM 9 C3' G B 401 88.804 90.760 18.733 1.00 65.97 C
ATOM 10 O3' G B 401 89.198 90.990 20.091 1.00 64.95 O
ATOM 11 C2' G B 401 87.658 91.679 18.335 1.00 66.38 C
ATOM 12 O2' G B 401 87.820 92.995 18.827 1.00 66.36 O
ATOM 13 C1' G B 401 87.782 91.688 16.809 1.00 67.15 C
ATOM 14 N9 G B 401 86.894 90.697 16.205 1.00 68.14 N
ATOM 15 C8 G B 401 87.237 89.447 15.737 1.00 68.99 C
ATOM 16 N7 G B 401 86.209 88.750 15.326 1.00 69.52 N
ATOM 17 C5 G B 401 85.120 89.592 15.511 1.00 69.77 C
ATOM 18 C6 G B 401 83.730 89.373 15.255 1.00 69.88 C
ATOM 19 O6 G B 401 83.182 88.361 14.775 1.00 69.56 O
ATOM 20 N1 G B 401 82.961 90.483 15.614 1.00 68.82 N
ATOM 21 C2 G B 401 83.465 91.655 16.138 1.00 68.53 C
ATOM 22 N2 G B 401 82.575 92.601 16.442 1.00 68.02 N
ATOM 23 N3 G B 401 84.758 91.881 16.356 1.00 69.09 N
ATOM 24 C4 G B 401 85.524 90.809 16.033 1.00 69.32 C
ATOM 25 P C B 402 88.671 90.010 21.267 1.00 65.36 P
ATOM 26 OP1 C B 402 89.641 90.079 22.394 1.00 65.18 O
ATOM 27 OP2 C B 402 88.308 88.687 20.698 1.00 65.19 O
ATOM 28 O5' C B 402 87.305 90.663 21.759 1.00 65.47 O
TER

Atoms:
OP1: (100.832,93.592,17.284)
OP2: (99.234,95.493,17.976)
C3': (96.453,91.880,15.399)
C1': (94.776,92.271,17.006)
C5': (98.312,91.816,17.155)
O4': (95.959,91.868,17.684)
C8: (95.545,94.666,17.484)
O2': (94.345,90.574,15.369)
C6: (92.636,96.650,17.402)
C5: (93.705,95.729,17.404)
C4: (93.391,94.398,17.172)
P: (99.562,94.038,17.931)
C4': (96.931,91.348,16.739)
C2': (94.934,91.854,15.542)
C2: (91.237,94.843,16.998)
N1: (91.389,96.160,17.201)
N3: (92.162,93.885,16.959)
N6: (92.780,97.969,17.578)
N7: (95.067,95.882,17.606)
N9: (94.588,93.716,17.214)
O5': (98.336,93.263,17.260)
O3': (96.944,91.099,14.321)
OP1: (92.424,87.452,17.741)
OP2: (90.581,86.634,16.124)
C3': (88.804,90.760,18.733)
C1': (87.782,91.688,16.809)
C5': (91.009,90.188,17.491)
O6: (83.182,88.361,14.775)
O4': (89.131,91.363,16.502)
C8: (87.237,89.447,15.737)
C2: (83.465,91.655,16.138)
C6: (83.730,89.373,15.255)
C5: (85.120,89.592,15.511)
C4: (85.524,90.809,16.033)
P: (91.462,87.727,16.619)
C4': (89.877,91.164,17.733)
C2': (87.658,91.679,18.335)
O2': (87.820,92.995,18.827)
N1: (82.961,90.483,15.614)
N2: (82.575,92.601,16.442)
N3: (84.758,91.881,16.356)
N7: (86.209,88.750,15.326)
N9: (86.894,90.697,16.205)
O5': (90.486,88.901,17.088)
O3': (89.198,90.990,20.091)
Image (generated by PyMOL):
PyMOL image
show in jmol