Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A396:A401
Extra
PDB:
ATOM 1 O3' A A 395 99.713 93.672 19.362 1.00 69.04 O
ATOM 2 P A A 396 99.716 94.235 17.850 1.00 69.46 P
ATOM 3 OP1 A A 396 100.957 93.716 17.203 1.00 69.22 O
ATOM 4 OP2 A A 396 99.472 95.699 17.866 1.00 67.77 O
ATOM 5 O5' A A 396 98.451 93.504 17.199 1.00 68.41 O
ATOM 6 C5' A A 396 98.411 92.061 17.066 1.00 68.73 C
ATOM 7 C4' A A 396 97.029 91.604 16.653 1.00 69.64 C
ATOM 8 O4' A A 396 96.061 92.126 17.594 1.00 69.58 O
ATOM 9 C3' A A 396 96.531 92.107 15.305 1.00 70.92 C
ATOM 10 O3' A A 396 97.041 91.326 14.226 1.00 71.90 O
ATOM 11 C2' A A 396 95.018 92.010 15.465 1.00 70.13 C
ATOM 12 O2' A A 396 94.511 90.684 15.376 1.00 69.48 O
ATOM 13 C1' A A 396 94.864 92.478 16.912 1.00 69.46 C
ATOM 14 N9 A A 396 94.667 93.925 17.062 1.00 68.36 N
ATOM 15 C8 A A 396 95.616 94.889 17.314 1.00 67.83 C
ATOM 16 N7 A A 396 95.123 96.098 17.439 1.00 66.66 N
ATOM 17 C5 A A 396 93.763 95.925 17.250 1.00 66.87 C
ATOM 18 C6 A A 396 92.679 96.825 17.278 1.00 67.08 C
ATOM 19 N6 A A 396 92.803 98.134 17.514 1.00 66.09 N
ATOM 20 N1 A A 396 91.440 96.324 17.059 1.00 67.33 N
ATOM 21 C2 A A 396 91.307 95.010 16.830 1.00 66.55 C
ATOM 22 N3 A A 396 92.245 94.066 16.781 1.00 67.43 N
ATOM 23 C4 A A 396 93.466 94.593 17.003 1.00 67.61 C
ATOM 24 P U A 397 97.651 92.058 12.927 1.00 72.71 P
ATOM 25 OP1 U A 397 98.424 90.997 12.246 1.00 73.54 O
ATOM 26 OP2 U A 397 98.318 93.357 13.248 1.00 72.72 O
ATOM 27 O5' U A 397 96.391 92.386 12.015 1.00 72.52 O
TER
ATOM 1 O3' C B 400 92.317 88.648 15.268 1.00 69.84 O
ATOM 2 P G B 401 91.563 88.025 16.550 1.00 69.68 P
ATOM 3 OP1 G B 401 92.540 87.773 17.654 1.00 69.45 O
ATOM 4 OP2 G B 401 90.698 86.911 16.075 1.00 68.84 O
ATOM 5 O5' G B 401 90.582 89.195 17.006 1.00 67.92 O
ATOM 6 C5' G B 401 91.095 90.473 17.413 1.00 64.40 C
ATOM 7 C4' G B 401 89.959 91.441 17.649 1.00 61.25 C
ATOM 8 O4' G B 401 89.206 91.640 16.416 1.00 61.39 O
ATOM 9 C3' G B 401 88.899 91.010 18.642 1.00 60.20 C
ATOM 10 O3' G B 401 89.327 91.189 19.992 1.00 58.56 O
ATOM 11 C2' G B 401 87.735 91.918 18.255 1.00 61.09 C
ATOM 12 O2' G B 401 87.845 93.244 18.740 1.00 61.40 O
ATOM 13 C1' G B 401 87.849 91.933 16.726 1.00 61.34 C
ATOM 14 N9 G B 401 86.979 90.926 16.117 1.00 62.23 N
ATOM 15 C8 G B 401 87.348 89.682 15.649 1.00 63.29 C
ATOM 16 N7 G B 401 86.338 88.967 15.230 1.00 64.36 N
ATOM 17 C5 G B 401 85.229 89.793 15.411 1.00 64.02 C
ATOM 18 C6 G B 401 83.833 89.551 15.148 1.00 63.91 C
ATOM 19 O6 G B 401 83.300 88.536 14.663 1.00 63.41 O
ATOM 20 N1 G B 401 83.050 90.642 15.514 1.00 62.36 N
ATOM 21 C2 G B 401 83.538 91.812 16.051 1.00 62.35 C
ATOM 22 N2 G B 401 82.623 92.729 16.385 1.00 62.40 N
ATOM 23 N3 G B 401 84.825 92.064 16.265 1.00 62.52 N
ATOM 24 C4 G B 401 85.608 91.014 15.939 1.00 62.97 C
ATOM 25 P C B 402 88.765 90.219 21.146 1.00 58.21 P
ATOM 26 OP1 C B 402 89.679 90.308 22.306 1.00 57.67 O
ATOM 27 OP2 C B 402 88.446 88.893 20.577 1.00 58.48 O
ATOM 28 O5' C B 402 87.392 90.886 21.575 1.00 58.41 O
TER
ATOM 2 P A A 396 99.716 94.235 17.850 1.00 69.46 P
ATOM 3 OP1 A A 396 100.957 93.716 17.203 1.00 69.22 O
ATOM 4 OP2 A A 396 99.472 95.699 17.866 1.00 67.77 O
ATOM 5 O5' A A 396 98.451 93.504 17.199 1.00 68.41 O
ATOM 6 C5' A A 396 98.411 92.061 17.066 1.00 68.73 C
ATOM 7 C4' A A 396 97.029 91.604 16.653 1.00 69.64 C
ATOM 8 O4' A A 396 96.061 92.126 17.594 1.00 69.58 O
ATOM 9 C3' A A 396 96.531 92.107 15.305 1.00 70.92 C
ATOM 10 O3' A A 396 97.041 91.326 14.226 1.00 71.90 O
ATOM 11 C2' A A 396 95.018 92.010 15.465 1.00 70.13 C
ATOM 12 O2' A A 396 94.511 90.684 15.376 1.00 69.48 O
ATOM 13 C1' A A 396 94.864 92.478 16.912 1.00 69.46 C
ATOM 14 N9 A A 396 94.667 93.925 17.062 1.00 68.36 N
ATOM 15 C8 A A 396 95.616 94.889 17.314 1.00 67.83 C
ATOM 16 N7 A A 396 95.123 96.098 17.439 1.00 66.66 N
ATOM 17 C5 A A 396 93.763 95.925 17.250 1.00 66.87 C
ATOM 18 C6 A A 396 92.679 96.825 17.278 1.00 67.08 C
ATOM 19 N6 A A 396 92.803 98.134 17.514 1.00 66.09 N
ATOM 20 N1 A A 396 91.440 96.324 17.059 1.00 67.33 N
ATOM 21 C2 A A 396 91.307 95.010 16.830 1.00 66.55 C
ATOM 22 N3 A A 396 92.245 94.066 16.781 1.00 67.43 N
ATOM 23 C4 A A 396 93.466 94.593 17.003 1.00 67.61 C
ATOM 24 P U A 397 97.651 92.058 12.927 1.00 72.71 P
ATOM 25 OP1 U A 397 98.424 90.997 12.246 1.00 73.54 O
ATOM 26 OP2 U A 397 98.318 93.357 13.248 1.00 72.72 O
ATOM 27 O5' U A 397 96.391 92.386 12.015 1.00 72.52 O
TER
ATOM 1 O3' C B 400 92.317 88.648 15.268 1.00 69.84 O
ATOM 2 P G B 401 91.563 88.025 16.550 1.00 69.68 P
ATOM 3 OP1 G B 401 92.540 87.773 17.654 1.00 69.45 O
ATOM 4 OP2 G B 401 90.698 86.911 16.075 1.00 68.84 O
ATOM 5 O5' G B 401 90.582 89.195 17.006 1.00 67.92 O
ATOM 6 C5' G B 401 91.095 90.473 17.413 1.00 64.40 C
ATOM 7 C4' G B 401 89.959 91.441 17.649 1.00 61.25 C
ATOM 8 O4' G B 401 89.206 91.640 16.416 1.00 61.39 O
ATOM 9 C3' G B 401 88.899 91.010 18.642 1.00 60.20 C
ATOM 10 O3' G B 401 89.327 91.189 19.992 1.00 58.56 O
ATOM 11 C2' G B 401 87.735 91.918 18.255 1.00 61.09 C
ATOM 12 O2' G B 401 87.845 93.244 18.740 1.00 61.40 O
ATOM 13 C1' G B 401 87.849 91.933 16.726 1.00 61.34 C
ATOM 14 N9 G B 401 86.979 90.926 16.117 1.00 62.23 N
ATOM 15 C8 G B 401 87.348 89.682 15.649 1.00 63.29 C
ATOM 16 N7 G B 401 86.338 88.967 15.230 1.00 64.36 N
ATOM 17 C5 G B 401 85.229 89.793 15.411 1.00 64.02 C
ATOM 18 C6 G B 401 83.833 89.551 15.148 1.00 63.91 C
ATOM 19 O6 G B 401 83.300 88.536 14.663 1.00 63.41 O
ATOM 20 N1 G B 401 83.050 90.642 15.514 1.00 62.36 N
ATOM 21 C2 G B 401 83.538 91.812 16.051 1.00 62.35 C
ATOM 22 N2 G B 401 82.623 92.729 16.385 1.00 62.40 N
ATOM 23 N3 G B 401 84.825 92.064 16.265 1.00 62.52 N
ATOM 24 C4 G B 401 85.608 91.014 15.939 1.00 62.97 C
ATOM 25 P C B 402 88.765 90.219 21.146 1.00 58.21 P
ATOM 26 OP1 C B 402 89.679 90.308 22.306 1.00 57.67 O
ATOM 27 OP2 C B 402 88.446 88.893 20.577 1.00 58.48 O
ATOM 28 O5' C B 402 87.392 90.886 21.575 1.00 58.41 O
TER
Atoms:
OP1: (100.957,93.716,17.203)
OP2: (99.472,95.699,17.866)
C3': (96.531,92.107,15.305)
C1': (94.864,92.478,16.912)
C5': (98.411,92.061,17.066)
O4': (96.061,92.126,17.594)
C8: (95.616,94.889,17.314)
O2': (94.511,90.684,15.376)
C6: (92.679,96.825,17.278)
C5: (93.763,95.925,17.250)
C4: (93.466,94.593,17.003)
P: (99.716,94.235,17.850)
C4': (97.029,91.604,16.653)
C2': (95.018,92.010,15.465)
C2: (91.307,95.010,16.830)
N1: (91.440,96.324,17.059)
N3: (92.245,94.066,16.781)
N6: (92.803,98.134,17.514)
N7: (95.123,96.098,17.439)
N9: (94.667,93.925,17.062)
O5': (98.451,93.504,17.199)
O3': (97.041,91.326,14.226)
OP2: (99.472,95.699,17.866)
C3': (96.531,92.107,15.305)
C1': (94.864,92.478,16.912)
C5': (98.411,92.061,17.066)
O4': (96.061,92.126,17.594)
C8: (95.616,94.889,17.314)
O2': (94.511,90.684,15.376)
C6: (92.679,96.825,17.278)
C5: (93.763,95.925,17.250)
C4: (93.466,94.593,17.003)
P: (99.716,94.235,17.850)
C4': (97.029,91.604,16.653)
C2': (95.018,92.010,15.465)
C2: (91.307,95.010,16.830)
N1: (91.440,96.324,17.059)
N3: (92.245,94.066,16.781)
N6: (92.803,98.134,17.514)
N7: (95.123,96.098,17.439)
N9: (94.667,93.925,17.062)
O5': (98.451,93.504,17.199)
O3': (97.041,91.326,14.226)
OP1: (92.540,87.773,17.654)
OP2: (90.698,86.911,16.075)
C3': (88.899,91.010,18.642)
C1': (87.849,91.933,16.726)
C5': (91.095,90.473,17.413)
O6: (83.300,88.536,14.663)
O4': (89.206,91.640,16.416)
C8: (87.348,89.682,15.649)
C2: (83.538,91.812,16.051)
C6: (83.833,89.551,15.148)
C5: (85.229,89.793,15.411)
C4: (85.608,91.014,15.939)
P: (91.563,88.025,16.550)
C4': (89.959,91.441,17.649)
C2': (87.735,91.918,18.255)
O2': (87.845,93.244,18.740)
N1: (83.050,90.642,15.514)
N2: (82.623,92.729,16.385)
N3: (84.825,92.064,16.265)
N7: (86.338,88.967,15.230)
N9: (86.979,90.926,16.117)
O5': (90.582,89.195,17.006)
O3': (89.327,91.189,19.992)
OP2: (90.698,86.911,16.075)
C3': (88.899,91.010,18.642)
C1': (87.849,91.933,16.726)
C5': (91.095,90.473,17.413)
O6: (83.300,88.536,14.663)
O4': (89.206,91.640,16.416)
C8: (87.348,89.682,15.649)
C2: (83.538,91.812,16.051)
C6: (83.833,89.551,15.148)
C5: (85.229,89.793,15.411)
C4: (85.608,91.014,15.939)
P: (91.563,88.025,16.550)
C4': (89.959,91.441,17.649)
C2': (87.735,91.918,18.255)
O2': (87.845,93.244,18.740)
N1: (83.050,90.642,15.514)
N2: (82.623,92.729,16.385)
N3: (84.825,92.064,16.265)
N7: (86.338,88.967,15.230)
N9: (86.979,90.926,16.117)
O5': (90.582,89.195,17.006)
O3': (89.327,91.189,19.992)
Image (generated by PyMOL):