ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.226 93.814 18.952 1.00 59.53 O
ATOM 2 P A A 396 99.308 94.287 17.411 1.00 59.56 P
ATOM 3 OP1 A A 396 100.568 93.714 16.878 1.00 58.63 O
ATOM 4 OP2 A A 396 99.068 95.746 17.304 1.00 58.64 O
ATOM 5 O5' A A 396 98.074 93.557 16.714 1.00 58.76 O
ATOM 6 C5' A A 396 97.960 92.116 16.709 1.00 56.62 C
ATOM 7 C4' A A 396 96.577 91.714 16.264 1.00 57.19 C
ATOM 8 O4' A A 396 95.611 92.291 17.178 1.00 55.96 O
ATOM 9 C3' A A 396 96.161 92.244 14.900 1.00 59.04 C
ATOM 10 O3' A A 396 96.628 91.387 13.859 1.00 61.58 O
ATOM 11 C2' A A 396 94.641 92.267 15.007 1.00 58.26 C
ATOM 12 O2' A A 396 94.062 90.992 14.815 1.00 59.58 O
ATOM 13 C1' A A 396 94.447 92.679 16.470 1.00 56.50 C
ATOM 14 N9 A A 396 94.231 94.112 16.685 1.00 54.81 N
ATOM 15 C8 A A 396 95.168 95.068 16.981 1.00 54.90 C
ATOM 16 N7 A A 396 94.668 96.269 17.133 1.00 54.10 N
ATOM 17 C5 A A 396 93.310 96.095 16.918 1.00 53.55 C
ATOM 18 C6 A A 396 92.227 96.991 16.936 1.00 54.57 C
ATOM 19 N6 A A 396 92.349 98.300 17.188 1.00 53.02 N
ATOM 20 N1 A A 396 90.996 96.493 16.683 1.00 55.22 N
ATOM 21 C2 A A 396 90.875 95.186 16.429 1.00 54.65 C
ATOM 22 N3 A A 396 91.815 94.247 16.382 1.00 55.96 N
ATOM 23 C4 A A 396 93.026 94.772 16.639 1.00 54.61 C
ATOM 24 P U A 397 97.209 92.014 12.493 1.00 64.09 P
ATOM 25 OP1 U A 397 97.825 90.893 11.749 1.00 64.86 O
ATOM 26 OP2 U A 397 98.024 93.212 12.808 1.00 64.55 O
ATOM 27 O5' U A 397 95.924 92.506 11.687 1.00 63.39 O
TER

ATOM 1 O3' C B 400 91.836 88.745 14.836 1.00 64.81 O
ATOM 2 P G B 401 91.096 88.039 16.081 1.00 64.78 P
ATOM 3 OP1 G B 401 92.127 87.788 17.122 1.00 64.17 O
ATOM 4 OP2 G B 401 90.290 86.906 15.560 1.00 64.99 O
ATOM 5 O5' G B 401 90.085 89.153 16.613 1.00 60.36 O
ATOM 6 C5' G B 401 90.573 90.438 17.036 1.00 56.20 C
ATOM 7 C4' G B 401 89.435 91.410 17.224 1.00 53.01 C
ATOM 8 O4' G B 401 88.673 91.531 15.996 1.00 51.33 O
ATOM 9 C3' G B 401 88.371 91.025 18.232 1.00 52.51 C
ATOM 10 O3' G B 401 88.800 91.251 19.560 1.00 52.36 O
ATOM 11 C2' G B 401 87.226 91.943 17.832 1.00 51.73 C
ATOM 12 O2' G B 401 87.429 93.275 18.262 1.00 49.51 O
ATOM 13 C1' G B 401 87.330 91.885 16.307 1.00 50.96 C
ATOM 14 N9 G B 401 86.425 90.902 15.710 1.00 50.17 N
ATOM 15 C8 G B 401 86.757 89.699 15.129 1.00 49.38 C
ATOM 16 N7 G B 401 85.721 89.045 14.677 1.00 48.29 N
ATOM 17 C5 G B 401 84.638 89.861 14.976 1.00 48.44 C
ATOM 18 C6 G B 401 83.247 89.681 14.725 1.00 49.09 C
ATOM 19 O6 G B 401 82.675 88.731 14.171 1.00 50.64 O
ATOM 20 N1 G B 401 82.503 90.757 15.193 1.00 47.38 N
ATOM 21 C2 G B 401 83.024 91.861 15.817 1.00 46.97 C
ATOM 22 N2 G B 401 82.146 92.795 16.182 1.00 46.27 N
ATOM 23 N3 G B 401 84.310 92.040 16.062 1.00 47.06 N
ATOM 24 C4 G B 401 85.055 91.010 15.615 1.00 48.90 C
ATOM 25 P C B 402 88.297 90.274 20.729 1.00 52.54 P
ATOM 26 OP1 C B 402 89.293 90.391 21.818 1.00 50.43 O
ATOM 27 OP2 C B 402 87.992 88.944 20.156 1.00 54.07 O
ATOM 28 O5' C B 402 86.905 90.897 21.185 1.00 51.60 O
TER

Atoms:
OP1: (100.568,93.714,16.878)
OP2: (99.068,95.746,17.304)
C3': (96.161,92.244,14.900)
C1': (94.447,92.679,16.470)
C5': (97.960,92.116,16.709)
O4': (95.611,92.291,17.178)
C8: (95.168,95.068,16.981)
O2': (94.062,90.992,14.815)
C6: (92.227,96.991,16.936)
C5: (93.310,96.095,16.918)
C4: (93.026,94.772,16.639)
P: (99.308,94.287,17.411)
C4': (96.577,91.714,16.264)
C2': (94.641,92.267,15.007)
C2: (90.875,95.186,16.429)
N1: (90.996,96.493,16.683)
N3: (91.815,94.247,16.382)
N6: (92.349,98.300,17.188)
N7: (94.668,96.269,17.133)
N9: (94.231,94.112,16.685)
O5': (98.074,93.557,16.714)
O3': (96.628,91.387,13.859)
OP1: (92.127,87.788,17.122)
OP2: (90.290,86.906,15.560)
C3': (88.371,91.025,18.232)
C1': (87.330,91.885,16.307)
C5': (90.573,90.438,17.036)
O6: (82.675,88.731,14.171)
O4': (88.673,91.531,15.996)
C8: (86.757,89.699,15.129)
C2: (83.024,91.861,15.817)
C6: (83.247,89.681,14.725)
C5: (84.638,89.861,14.976)
C4: (85.055,91.010,15.615)
P: (91.096,88.039,16.081)
C4': (89.435,91.410,17.224)
C2': (87.226,91.943,17.832)
O2': (87.429,93.275,18.262)
N1: (82.503,90.757,15.193)
N2: (82.146,92.795,16.182)
N3: (84.310,92.040,16.062)
N7: (85.721,89.045,14.677)
N9: (86.425,90.902,15.710)
O5': (90.085,89.153,16.613)
O3': (88.800,91.251,19.560)
Image (generated by PyMOL):
PyMOL image
show in jmol