ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.176 92.789 18.392 1.00 52.12 O
ATOM 2 P A A 396 99.177 93.237 16.842 1.00 51.03 P
ATOM 3 OP1 A A 396 100.423 92.679 16.244 1.00 52.58 O
ATOM 4 OP2 A A 396 98.901 94.696 16.723 1.00 49.80 O
ATOM 5 O5' A A 396 97.917 92.477 16.232 1.00 49.70 O
ATOM 6 C5' A A 396 97.810 91.041 16.273 1.00 46.45 C
ATOM 7 C4' A A 396 96.438 90.622 15.808 1.00 47.30 C
ATOM 8 O4' A A 396 95.453 91.176 16.719 1.00 47.50 O
ATOM 9 C3' A A 396 96.033 91.156 14.441 1.00 48.74 C
ATOM 10 O3' A A 396 96.535 90.318 13.393 1.00 50.96 O
ATOM 11 C2' A A 396 94.508 91.178 14.534 1.00 48.51 C
ATOM 12 O2' A A 396 93.886 89.925 14.304 1.00 48.85 O
ATOM 13 C1' A A 396 94.298 91.578 16.001 1.00 47.29 C
ATOM 14 N9 A A 396 94.103 93.015 16.209 1.00 45.71 N
ATOM 15 C8 A A 396 95.066 93.968 16.436 1.00 44.82 C
ATOM 16 N7 A A 396 94.588 95.183 16.565 1.00 44.35 N
ATOM 17 C5 A A 396 93.219 95.019 16.422 1.00 44.23 C
ATOM 18 C6 A A 396 92.154 95.930 16.460 1.00 45.05 C
ATOM 19 N6 A A 396 92.313 97.241 16.669 1.00 44.55 N
ATOM 20 N1 A A 396 90.901 95.446 16.277 1.00 45.79 N
ATOM 21 C2 A A 396 90.747 94.133 16.077 1.00 45.14 C
ATOM 22 N3 A A 396 91.673 93.174 16.025 1.00 47.24 N
ATOM 23 C4 A A 396 92.904 93.690 16.205 1.00 45.27 C
ATOM 24 P U A 397 97.153 90.973 12.050 1.00 53.25 P
ATOM 25 OP1 U A 397 97.773 89.849 11.300 1.00 53.80 O
ATOM 26 OP2 U A 397 97.983 92.161 12.393 1.00 52.26 O
ATOM 27 O5' U A 397 95.875 91.464 11.234 1.00 50.21 O
TER

ATOM 1 O3' C B 400 91.752 87.778 14.325 1.00 53.80 O
ATOM 2 P G B 401 91.098 87.056 15.606 1.00 55.13 P
ATOM 3 OP1 G B 401 92.197 86.820 16.578 1.00 54.16 O
ATOM 4 OP2 G B 401 90.270 85.911 15.139 1.00 56.19 O
ATOM 5 O5' G B 401 90.101 88.154 16.195 1.00 53.71 O
ATOM 6 C5' G B 401 90.584 89.446 16.595 1.00 49.84 C
ATOM 7 C4' G B 401 89.431 90.393 16.833 1.00 48.01 C
ATOM 8 O4' G B 401 88.663 90.562 15.611 1.00 46.71 O
ATOM 9 C3' G B 401 88.377 89.951 17.831 1.00 46.59 C
ATOM 10 O3' G B 401 88.792 90.134 19.173 1.00 45.83 O
ATOM 11 C2' G B 401 87.215 90.863 17.468 1.00 45.82 C
ATOM 12 O2' G B 401 87.410 92.175 17.948 1.00 45.12 O
ATOM 13 C1' G B 401 87.310 90.863 15.941 1.00 46.12 C
ATOM 14 N9 G B 401 86.435 89.855 15.340 1.00 45.94 N
ATOM 15 C8 G B 401 86.796 88.629 14.831 1.00 44.77 C
ATOM 16 N7 G B 401 85.779 87.940 14.388 1.00 44.57 N
ATOM 17 C5 G B 401 84.681 88.761 14.608 1.00 44.17 C
ATOM 18 C6 G B 401 83.298 88.549 14.333 1.00 44.16 C
ATOM 19 O6 G B 401 82.757 87.566 13.814 1.00 44.66 O
ATOM 20 N1 G B 401 82.523 89.637 14.729 1.00 44.36 N
ATOM 21 C2 G B 401 83.010 90.784 15.312 1.00 44.15 C
ATOM 22 N2 G B 401 82.103 91.721 15.631 1.00 41.28 N
ATOM 23 N3 G B 401 84.296 90.995 15.566 1.00 45.35 N
ATOM 24 C4 G B 401 85.067 89.948 15.192 1.00 44.45 C
ATOM 25 P C B 402 88.229 89.153 20.315 1.00 47.27 P
ATOM 26 OP1 C B 402 89.164 89.236 21.465 1.00 48.30 O
ATOM 27 OP2 C B 402 87.939 87.828 19.704 1.00 49.19 O
ATOM 28 O5' C B 402 86.826 89.791 20.724 1.00 46.09 O
TER

Atoms:
OP1: (100.423,92.679,16.244)
OP2: (98.901,94.696,16.723)
C3': (96.033,91.156,14.441)
C1': (94.298,91.578,16.001)
C5': (97.810,91.041,16.273)
O4': (95.453,91.176,16.719)
C8: (95.066,93.968,16.436)
O2': (93.886,89.925,14.304)
C6: (92.154,95.930,16.460)
C5: (93.219,95.019,16.422)
C4: (92.904,93.690,16.205)
P: (99.177,93.237,16.842)
C4': (96.438,90.622,15.808)
C2': (94.508,91.178,14.534)
C2: (90.747,94.133,16.077)
N1: (90.901,95.446,16.277)
N3: (91.673,93.174,16.025)
N6: (92.313,97.241,16.669)
N7: (94.588,95.183,16.565)
N9: (94.103,93.015,16.209)
O5': (97.917,92.477,16.232)
O3': (96.535,90.318,13.393)
OP1: (92.197,86.820,16.578)
OP2: (90.270,85.911,15.139)
C3': (88.377,89.951,17.831)
C1': (87.310,90.863,15.941)
C5': (90.584,89.446,16.595)
O6: (82.757,87.566,13.814)
O4': (88.663,90.562,15.611)
C8: (86.796,88.629,14.831)
C2: (83.010,90.784,15.312)
C6: (83.298,88.549,14.333)
C5: (84.681,88.761,14.608)
C4: (85.067,89.948,15.192)
P: (91.098,87.056,15.606)
C4': (89.431,90.393,16.833)
C2': (87.215,90.863,17.468)
O2': (87.410,92.175,17.948)
N1: (82.523,89.637,14.729)
N2: (82.103,91.721,15.631)
N3: (84.296,90.995,15.566)
N7: (85.779,87.940,14.388)
N9: (86.435,89.855,15.340)
O5': (90.101,88.154,16.195)
O3': (88.792,90.134,19.173)
Image (generated by PyMOL):
PyMOL image
show in jmol