ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.321 93.015 18.453 1.00 61.11 O
ATOM 2 P A A 396 99.282 93.417 16.891 1.00 59.60 P
ATOM 3 OP1 A A 396 100.491 92.807 16.275 1.00 60.98 O
ATOM 4 OP2 A A 396 99.044 94.874 16.741 1.00 58.24 O
ATOM 5 O5' A A 396 97.991 92.663 16.340 1.00 58.53 O
ATOM 6 C5' A A 396 97.922 91.225 16.307 1.00 56.12 C
ATOM 7 C4' A A 396 96.556 90.793 15.838 1.00 56.65 C
ATOM 8 O4' A A 396 95.570 91.316 16.763 1.00 55.88 O
ATOM 9 C3' A A 396 96.135 91.338 14.480 1.00 57.12 C
ATOM 10 O3' A A 396 96.636 90.509 13.425 1.00 60.25 O
ATOM 11 C2' A A 396 94.612 91.326 14.585 1.00 57.28 C
ATOM 12 O2' A A 396 94.030 90.054 14.361 1.00 56.88 O
ATOM 13 C1' A A 396 94.405 91.709 16.057 1.00 55.17 C
ATOM 14 N9 A A 396 94.204 93.141 16.277 1.00 52.12 N
ATOM 15 C8 A A 396 95.165 94.083 16.528 1.00 51.37 C
ATOM 16 N7 A A 396 94.694 95.297 16.662 1.00 51.75 N
ATOM 17 C5 A A 396 93.327 95.144 16.493 1.00 51.25 C
ATOM 18 C6 A A 396 92.265 96.062 16.526 1.00 51.49 C
ATOM 19 N6 A A 396 92.427 97.370 16.747 1.00 49.44 N
ATOM 20 N1 A A 396 91.014 95.585 16.327 1.00 52.10 N
ATOM 21 C2 A A 396 90.855 94.275 16.119 1.00 51.32 C
ATOM 22 N3 A A 396 91.777 93.313 16.068 1.00 53.06 N
ATOM 23 C4 A A 396 93.008 93.821 16.262 1.00 52.09 C
ATOM 24 P U A 397 97.191 91.171 12.057 1.00 61.48 P
ATOM 25 OP1 U A 397 97.742 90.053 11.256 1.00 63.03 O
ATOM 26 OP2 U A 397 98.059 92.336 12.375 1.00 60.75 O
ATOM 27 O5' U A 397 95.888 91.698 11.309 1.00 60.19 O
TER

ATOM 1 O3' C B 400 91.884 87.937 14.364 1.00 63.29 O
ATOM 2 P G B 401 91.207 87.260 15.658 1.00 63.98 P
ATOM 3 OP1 G B 401 92.298 87.057 16.649 1.00 62.29 O
ATOM 4 OP2 G B 401 90.390 86.100 15.213 1.00 65.63 O
ATOM 5 O5' G B 401 90.195 88.368 16.203 1.00 61.85 O
ATOM 6 C5' G B 401 90.672 89.657 16.630 1.00 56.44 C
ATOM 7 C4' G B 401 89.515 90.600 16.870 1.00 53.55 C
ATOM 8 O4' G B 401 88.735 90.755 15.655 1.00 51.28 O
ATOM 9 C3' G B 401 88.476 90.168 17.890 1.00 51.40 C
ATOM 10 O3' G B 401 88.904 90.390 19.219 1.00 50.47 O
ATOM 11 C2' G B 401 87.299 91.056 17.524 1.00 51.04 C
ATOM 12 O2' G B 401 87.489 92.379 17.974 1.00 50.23 O
ATOM 13 C1' G B 401 87.378 91.033 15.995 1.00 51.11 C
ATOM 14 N9 G B 401 86.516 90.006 15.405 1.00 49.98 N
ATOM 15 C8 G B 401 86.902 88.792 14.882 1.00 48.83 C
ATOM 16 N7 G B 401 85.901 88.088 14.431 1.00 47.77 N
ATOM 17 C5 G B 401 84.785 88.882 14.663 1.00 47.98 C
ATOM 18 C6 G B 401 83.406 88.648 14.376 1.00 48.57 C
ATOM 19 O6 G B 401 82.887 87.671 13.822 1.00 47.31 O
ATOM 20 N1 G B 401 82.608 89.711 14.797 1.00 49.57 N
ATOM 21 C2 G B 401 83.074 90.857 15.400 1.00 48.23 C
ATOM 22 N2 G B 401 82.156 91.771 15.733 1.00 46.40 N
ATOM 23 N3 G B 401 84.352 91.090 15.657 1.00 49.10 N
ATOM 24 C4 G B 401 85.146 90.067 15.267 1.00 48.27 C
ATOM 25 P C B 402 88.368 89.434 20.392 1.00 52.95 P
ATOM 26 OP1 C B 402 89.265 89.620 21.551 1.00 52.96 O
ATOM 27 OP2 C B 402 88.178 88.072 19.834 1.00 55.76 O
ATOM 28 O5' C B 402 86.925 90.016 20.753 1.00 50.74 O
TER

Atoms:
OP1: (100.491,92.807,16.275)
OP2: (99.044,94.874,16.741)
C3': (96.135,91.338,14.480)
C1': (94.405,91.709,16.057)
C5': (97.922,91.225,16.307)
O4': (95.570,91.316,16.763)
C8: (95.165,94.083,16.528)
O2': (94.030,90.054,14.361)
C6: (92.265,96.062,16.526)
C5: (93.327,95.144,16.493)
C4: (93.008,93.821,16.262)
P: (99.282,93.417,16.891)
C4': (96.556,90.793,15.838)
C2': (94.612,91.326,14.585)
C2: (90.855,94.275,16.119)
N1: (91.014,95.585,16.327)
N3: (91.777,93.313,16.068)
N6: (92.427,97.370,16.747)
N7: (94.694,95.297,16.662)
N9: (94.204,93.141,16.277)
O5': (97.991,92.663,16.340)
O3': (96.636,90.509,13.425)
OP1: (92.298,87.057,16.649)
OP2: (90.390,86.100,15.213)
C3': (88.476,90.168,17.890)
C1': (87.378,91.033,15.995)
C5': (90.672,89.657,16.630)
O6: (82.887,87.671,13.822)
O4': (88.735,90.755,15.655)
C8: (86.902,88.792,14.882)
C2: (83.074,90.857,15.400)
C6: (83.406,88.648,14.376)
C5: (84.785,88.882,14.663)
C4: (85.146,90.067,15.267)
P: (91.207,87.260,15.658)
C4': (89.515,90.600,16.870)
C2': (87.299,91.056,17.524)
O2': (87.489,92.379,17.974)
N1: (82.608,89.711,14.797)
N2: (82.156,91.771,15.733)
N3: (84.352,91.090,15.657)
N7: (85.901,88.088,14.431)
N9: (86.516,90.006,15.405)
O5': (90.195,88.368,16.203)
O3': (88.904,90.390,19.219)
Image (generated by PyMOL):
PyMOL image
show in jmol