ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.147 92.775 18.514 1.00 56.57 O
ATOM 2 P A A 396 99.161 93.264 16.978 1.00 54.74 P
ATOM 3 OP1 A A 396 100.417 92.751 16.374 1.00 55.95 O
ATOM 4 OP2 A A 396 98.861 94.715 16.907 1.00 54.82 O
ATOM 5 O5' A A 396 97.922 92.500 16.331 1.00 54.71 O
ATOM 6 C5' A A 396 97.829 91.062 16.357 1.00 51.66 C
ATOM 7 C4' A A 396 96.461 90.631 15.889 1.00 53.21 C
ATOM 8 O4' A A 396 95.473 91.163 16.810 1.00 52.79 O
ATOM 9 C3' A A 396 96.044 91.171 14.527 1.00 54.01 C
ATOM 10 O3' A A 396 96.541 90.342 13.471 1.00 57.07 O
ATOM 11 C2' A A 396 94.520 91.167 14.628 1.00 53.57 C
ATOM 12 O2' A A 396 93.939 89.895 14.404 1.00 53.82 O
ATOM 13 C1' A A 396 94.311 91.553 16.099 1.00 51.92 C
ATOM 14 N9 A A 396 94.106 92.986 16.313 1.00 49.78 N
ATOM 15 C8 A A 396 95.066 93.939 16.535 1.00 49.20 C
ATOM 16 N7 A A 396 94.588 95.150 16.667 1.00 48.87 N
ATOM 17 C5 A A 396 93.220 94.986 16.528 1.00 48.24 C
ATOM 18 C6 A A 396 92.156 95.895 16.570 1.00 48.54 C
ATOM 19 N6 A A 396 92.315 97.206 16.762 1.00 46.75 N
ATOM 20 N1 A A 396 90.904 95.408 16.406 1.00 48.62 N
ATOM 21 C2 A A 396 90.749 94.096 16.214 1.00 48.63 C
ATOM 22 N3 A A 396 91.674 93.139 16.153 1.00 50.63 N
ATOM 23 C4 A A 396 92.905 93.657 16.318 1.00 49.96 C
ATOM 24 P U A 397 97.084 91.002 12.098 1.00 58.88 P
ATOM 25 OP1 U A 397 97.656 89.887 11.308 1.00 61.22 O
ATOM 26 OP2 U A 397 97.930 92.189 12.397 1.00 58.67 O
ATOM 27 O5' U A 397 95.772 91.503 11.348 1.00 57.12 O
TER

ATOM 1 O3' C B 400 91.745 87.751 14.443 1.00 56.95 O
ATOM 2 P G B 401 91.068 87.072 15.735 1.00 56.70 P
ATOM 3 OP1 G B 401 92.153 86.860 16.726 1.00 57.17 O
ATOM 4 OP2 G B 401 90.242 85.919 15.293 1.00 58.87 O
ATOM 5 O5' G B 401 90.063 88.184 16.281 1.00 55.75 O
ATOM 6 C5' G B 401 90.540 89.478 16.674 1.00 51.00 C
ATOM 7 C4' G B 401 89.384 90.421 16.907 1.00 49.58 C
ATOM 8 O4' G B 401 88.608 90.569 15.689 1.00 48.81 O
ATOM 9 C3' G B 401 88.339 89.996 17.922 1.00 47.93 C
ATOM 10 O3' G B 401 88.770 90.203 19.254 1.00 46.66 O
ATOM 11 C2' G B 401 87.174 90.901 17.553 1.00 47.81 C
ATOM 12 O2' G B 401 87.374 92.226 17.997 1.00 47.96 O
ATOM 13 C1' G B 401 87.257 90.874 16.026 1.00 48.29 C
ATOM 14 N9 G B 401 86.377 89.863 15.440 1.00 47.41 N
ATOM 15 C8 G B 401 86.734 88.644 14.913 1.00 45.85 C
ATOM 16 N7 G B 401 85.716 87.962 14.465 1.00 45.59 N
ATOM 17 C5 G B 401 84.621 88.779 14.706 1.00 46.07 C
ATOM 18 C6 G B 401 83.243 88.578 14.424 1.00 46.66 C
ATOM 19 O6 G B 401 82.704 87.611 13.875 1.00 47.32 O
ATOM 20 N1 G B 401 82.470 89.658 14.846 1.00 47.86 N
ATOM 21 C2 G B 401 82.961 90.792 15.455 1.00 47.37 C
ATOM 22 N2 G B 401 82.062 91.730 15.790 1.00 45.55 N
ATOM 23 N3 G B 401 84.242 90.992 15.714 1.00 47.88 N
ATOM 24 C4 G B 401 85.010 89.953 15.313 1.00 46.63 C
ATOM 25 P C B 402 88.233 89.237 20.419 1.00 48.12 P
ATOM 26 OP1 C B 402 89.173 89.370 21.554 1.00 46.90 O
ATOM 27 OP2 C B 402 87.960 87.891 19.854 1.00 50.54 O
ATOM 28 O5' C B 402 86.820 89.859 20.828 1.00 47.32 O
TER

Atoms:
OP1: (100.417,92.751,16.374)
OP2: (98.861,94.715,16.907)
C3': (96.044,91.171,14.527)
C1': (94.311,91.553,16.099)
C5': (97.829,91.062,16.357)
O4': (95.473,91.163,16.810)
C8: (95.066,93.939,16.535)
O2': (93.939,89.895,14.404)
C6: (92.156,95.895,16.570)
C5: (93.220,94.986,16.528)
C4: (92.905,93.657,16.318)
P: (99.161,93.264,16.978)
C4': (96.461,90.631,15.889)
C2': (94.520,91.167,14.628)
C2: (90.749,94.096,16.214)
N1: (90.904,95.408,16.406)
N3: (91.674,93.139,16.153)
N6: (92.315,97.206,16.762)
N7: (94.588,95.150,16.667)
N9: (94.106,92.986,16.313)
O5': (97.922,92.500,16.331)
O3': (96.541,90.342,13.471)
OP1: (92.153,86.860,16.726)
OP2: (90.242,85.919,15.293)
C3': (88.339,89.996,17.922)
C1': (87.257,90.874,16.026)
C5': (90.540,89.478,16.674)
O6: (82.704,87.611,13.875)
O4': (88.608,90.569,15.689)
C8: (86.734,88.644,14.913)
C2: (82.961,90.792,15.455)
C6: (83.243,88.578,14.424)
C5: (84.621,88.779,14.706)
C4: (85.010,89.953,15.313)
P: (91.068,87.072,15.735)
C4': (89.384,90.421,16.907)
C2': (87.174,90.901,17.553)
O2': (87.374,92.226,17.997)
N1: (82.470,89.658,14.846)
N2: (82.062,91.730,15.790)
N3: (84.242,90.992,15.714)
N7: (85.716,87.962,14.465)
N9: (86.377,89.863,15.440)
O5': (90.063,88.184,16.281)
O3': (88.770,90.203,19.254)
Image (generated by PyMOL):
PyMOL image
show in jmol