ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.474 93.505 18.960 1.00 59.90 O
ATOM 2 P A A 396 99.576 94.044 17.443 1.00 59.53 P
ATOM 3 OP1 A A 396 100.853 93.515 16.903 1.00 58.35 O
ATOM 4 OP2 A A 396 99.318 95.504 17.407 1.00 57.27 O
ATOM 5 O5' A A 396 98.358 93.334 16.701 1.00 56.26 O
ATOM 6 C5' A A 396 98.210 91.903 16.716 1.00 54.66 C
ATOM 7 C4' A A 396 96.816 91.528 16.280 1.00 55.28 C
ATOM 8 O4' A A 396 95.859 92.103 17.207 1.00 54.10 O
ATOM 9 C3' A A 396 96.392 92.067 14.925 1.00 56.43 C
ATOM 10 O3' A A 396 96.849 91.209 13.884 1.00 59.55 O
ATOM 11 C2' A A 396 94.874 92.078 15.047 1.00 55.77 C
ATOM 12 O2' A A 396 94.321 90.790 14.871 1.00 57.81 O
ATOM 13 C1' A A 396 94.692 92.497 16.511 1.00 53.82 C
ATOM 14 N9 A A 396 94.504 93.936 16.715 1.00 51.91 N
ATOM 15 C8 A A 396 95.465 94.877 16.993 1.00 51.39 C
ATOM 16 N7 A A 396 94.996 96.093 17.123 1.00 49.87 N
ATOM 17 C5 A A 396 93.633 95.946 16.919 1.00 50.84 C
ATOM 18 C6 A A 396 92.572 96.868 16.931 1.00 51.22 C
ATOM 19 N6 A A 396 92.728 98.175 17.154 1.00 49.15 N
ATOM 20 N1 A A 396 91.327 96.394 16.702 1.00 52.22 N
ATOM 21 C2 A A 396 91.172 95.083 16.471 1.00 51.30 C
ATOM 22 N3 A A 396 92.088 94.122 16.431 1.00 51.71 N
ATOM 23 C4 A A 396 93.314 94.623 16.667 1.00 51.41 C
ATOM 24 P U A 397 97.507 91.828 12.548 1.00 61.53 P
ATOM 25 OP1 U A 397 98.221 90.700 11.905 1.00 62.41 O
ATOM 26 OP2 U A 397 98.243 93.080 12.856 1.00 61.75 O
ATOM 27 O5' U A 397 96.267 92.222 11.633 1.00 61.05 O
TER

ATOM 1 O3' C B 400 92.171 88.660 14.899 1.00 60.02 O
ATOM 2 P G B 401 91.430 87.989 16.160 1.00 60.55 P
ATOM 3 OP1 G B 401 92.460 87.783 17.209 1.00 60.27 O
ATOM 4 OP2 G B 401 90.625 86.837 15.683 1.00 59.71 O
ATOM 5 O5' G B 401 90.420 89.121 16.651 1.00 57.92 O
ATOM 6 C5' G B 401 90.916 90.410 17.060 1.00 54.49 C
ATOM 7 C4' G B 401 89.778 91.370 17.303 1.00 50.87 C
ATOM 8 O4' G B 401 88.993 91.536 16.092 1.00 50.21 O
ATOM 9 C3' G B 401 88.741 90.942 18.318 1.00 50.09 C
ATOM 10 O3' G B 401 89.199 91.114 19.649 1.00 48.72 O
ATOM 11 C2' G B 401 87.577 91.857 17.965 1.00 49.82 C
ATOM 12 O2' G B 401 87.774 93.186 18.406 1.00 49.07 O
ATOM 13 C1' G B 401 87.647 91.838 16.438 1.00 49.11 C
ATOM 14 N9 G B 401 86.764 90.832 15.846 1.00 49.21 N
ATOM 15 C8 G B 401 87.118 89.620 15.296 1.00 49.05 C
ATOM 16 N7 G B 401 86.096 88.947 14.835 1.00 47.88 N
ATOM 17 C5 G B 401 85.001 89.760 15.098 1.00 47.91 C
ATOM 18 C6 G B 401 83.615 89.564 14.824 1.00 48.27 C
ATOM 19 O6 G B 401 83.061 88.606 14.267 1.00 48.24 O
ATOM 20 N1 G B 401 82.854 90.639 15.270 1.00 47.87 N
ATOM 21 C2 G B 401 83.354 91.757 15.892 1.00 47.68 C
ATOM 22 N2 G B 401 82.460 92.686 16.246 1.00 48.39 N
ATOM 23 N3 G B 401 84.635 91.954 16.148 1.00 46.76 N
ATOM 24 C4 G B 401 85.396 90.924 15.727 1.00 48.24 C
ATOM 25 P C B 402 88.616 90.171 20.812 1.00 48.30 P
ATOM 26 OP1 C B 402 89.515 90.297 21.981 1.00 45.38 O
ATOM 27 OP2 C B 402 88.353 88.834 20.236 1.00 49.42 O
ATOM 28 O5' C B 402 87.200 90.817 21.161 1.00 46.98 O
TER

Atoms:
OP1: (100.853,93.515,16.903)
OP2: (99.318,95.504,17.407)
C3': (96.392,92.067,14.925)
C1': (94.692,92.497,16.511)
C5': (98.210,91.903,16.716)
O4': (95.859,92.103,17.207)
C8: (95.465,94.877,16.993)
O2': (94.321,90.790,14.871)
C6: (92.572,96.868,16.931)
C5: (93.633,95.946,16.919)
C4: (93.314,94.623,16.667)
P: (99.576,94.044,17.443)
C4': (96.816,91.528,16.280)
C2': (94.874,92.078,15.047)
C2: (91.172,95.083,16.471)
N1: (91.327,96.394,16.702)
N3: (92.088,94.122,16.431)
N6: (92.728,98.175,17.154)
N7: (94.996,96.093,17.123)
N9: (94.504,93.936,16.715)
O5': (98.358,93.334,16.701)
O3': (96.849,91.209,13.884)
OP1: (92.460,87.783,17.209)
OP2: (90.625,86.837,15.683)
C3': (88.741,90.942,18.318)
C1': (87.647,91.838,16.438)
C5': (90.916,90.410,17.060)
O6: (83.061,88.606,14.267)
O4': (88.993,91.536,16.092)
C8: (87.118,89.620,15.296)
C2: (83.354,91.757,15.892)
C6: (83.615,89.564,14.824)
C5: (85.001,89.760,15.098)
C4: (85.396,90.924,15.727)
P: (91.430,87.989,16.160)
C4': (89.778,91.370,17.303)
C2': (87.577,91.857,17.965)
O2': (87.774,93.186,18.406)
N1: (82.854,90.639,15.270)
N2: (82.460,92.686,16.246)
N3: (84.635,91.954,16.148)
N7: (86.096,88.947,14.835)
N9: (86.764,90.832,15.846)
O5': (90.420,89.121,16.651)
O3': (89.199,91.114,19.649)
Image (generated by PyMOL):
PyMOL image
show in jmol