Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0396:0401
Extra
PDB:
ATOM 1 O3' A A 395 99.385 93.728 18.972 1.00 56.22 O
ATOM 2 P A A 396 99.450 94.220 17.436 1.00 54.63 P
ATOM 3 OP1 A A 396 100.698 93.655 16.864 1.00 53.55 O
ATOM 4 OP2 A A 396 99.218 95.682 17.377 1.00 52.65 O
ATOM 5 O5' A A 396 98.197 93.514 16.748 1.00 51.35 O
ATOM 6 C5' A A 396 98.074 92.080 16.713 1.00 48.91 C
ATOM 7 C4' A A 396 96.682 91.697 16.276 1.00 48.67 C
ATOM 8 O4' A A 396 95.731 92.289 17.197 1.00 47.51 O
ATOM 9 C3' A A 396 96.265 92.228 14.915 1.00 50.37 C
ATOM 10 O3' A A 396 96.715 91.359 13.879 1.00 53.80 O
ATOM 11 C2' A A 396 94.745 92.278 15.033 1.00 49.47 C
ATOM 12 O2' A A 396 94.129 91.022 14.838 1.00 50.84 O
ATOM 13 C1' A A 396 94.569 92.694 16.498 1.00 47.43 C
ATOM 14 N9 A A 396 94.387 94.132 16.710 1.00 45.44 N
ATOM 15 C8 A A 396 95.347 95.078 16.979 1.00 44.67 C
ATOM 16 N7 A A 396 94.871 96.291 17.116 1.00 42.58 N
ATOM 17 C5 A A 396 93.507 96.136 16.926 1.00 44.17 C
ATOM 18 C6 A A 396 92.440 97.050 16.943 1.00 44.27 C
ATOM 19 N6 A A 396 92.588 98.359 17.159 1.00 41.53 N
ATOM 20 N1 A A 396 91.198 96.568 16.724 1.00 45.26 N
ATOM 21 C2 A A 396 91.048 95.256 16.501 1.00 44.63 C
ATOM 22 N3 A A 396 91.970 94.301 16.455 1.00 44.85 N
ATOM 23 C4 A A 396 93.194 94.812 16.677 1.00 44.65 C
ATOM 24 P U A 397 97.353 91.970 12.530 1.00 56.43 P
ATOM 25 OP1 U A 397 97.981 90.834 11.818 1.00 56.71 O
ATOM 26 OP2 U A 397 98.168 93.167 12.861 1.00 57.91 O
ATOM 27 O5' U A 397 96.098 92.457 11.684 1.00 55.78 O
TER
ATOM 1 O3' C B 400 91.995 88.902 14.879 1.00 54.03 O
ATOM 2 P G B 401 91.293 88.203 16.150 1.00 54.93 P
ATOM 3 OP1 G B 401 92.363 87.975 17.153 1.00 53.38 O
ATOM 4 OP2 G B 401 90.457 87.065 15.695 1.00 54.05 O
ATOM 5 O5' G B 401 90.300 89.325 16.696 1.00 52.43 O
ATOM 6 C5' G B 401 90.808 90.604 17.115 1.00 49.09 C
ATOM 7 C4' G B 401 89.678 91.574 17.343 1.00 46.16 C
ATOM 8 O4' G B 401 88.915 91.756 16.120 1.00 45.34 O
ATOM 9 C3' G B 401 88.619 91.149 18.335 1.00 45.16 C
ATOM 10 O3' G B 401 89.058 91.308 19.671 1.00 44.98 O
ATOM 11 C2' G B 401 87.478 92.084 17.972 1.00 44.61 C
ATOM 12 O2' G B 401 87.711 93.403 18.423 1.00 43.13 O
ATOM 13 C1' G B 401 87.568 92.066 16.446 1.00 44.14 C
ATOM 14 N9 G B 401 86.695 91.059 15.846 1.00 45.23 N
ATOM 15 C8 G B 401 87.065 89.868 15.266 1.00 44.80 C
ATOM 16 N7 G B 401 86.052 89.187 14.802 1.00 44.08 N
ATOM 17 C5 G B 401 84.944 89.970 15.098 1.00 44.40 C
ATOM 18 C6 G B 401 83.560 89.752 14.837 1.00 44.79 C
ATOM 19 O6 G B 401 83.019 88.792 14.273 1.00 44.93 O
ATOM 20 N1 G B 401 82.782 90.801 15.311 1.00 44.98 N
ATOM 21 C2 G B 401 83.267 91.916 15.949 1.00 45.19 C
ATOM 22 N2 G B 401 82.359 92.822 16.324 1.00 46.04 N
ATOM 23 N3 G B 401 84.548 92.130 16.200 1.00 43.84 N
ATOM 24 C4 G B 401 85.324 91.126 15.748 1.00 44.67 C
ATOM 25 P C B 402 88.505 90.315 20.808 1.00 44.01 P
ATOM 26 OP1 C B 402 89.461 90.379 21.939 1.00 40.47 O
ATOM 27 OP2 C B 402 88.191 89.005 20.188 1.00 44.25 O
ATOM 28 O5' C B 402 87.113 90.962 21.232 1.00 42.70 O
TER
ATOM 2 P A A 396 99.450 94.220 17.436 1.00 54.63 P
ATOM 3 OP1 A A 396 100.698 93.655 16.864 1.00 53.55 O
ATOM 4 OP2 A A 396 99.218 95.682 17.377 1.00 52.65 O
ATOM 5 O5' A A 396 98.197 93.514 16.748 1.00 51.35 O
ATOM 6 C5' A A 396 98.074 92.080 16.713 1.00 48.91 C
ATOM 7 C4' A A 396 96.682 91.697 16.276 1.00 48.67 C
ATOM 8 O4' A A 396 95.731 92.289 17.197 1.00 47.51 O
ATOM 9 C3' A A 396 96.265 92.228 14.915 1.00 50.37 C
ATOM 10 O3' A A 396 96.715 91.359 13.879 1.00 53.80 O
ATOM 11 C2' A A 396 94.745 92.278 15.033 1.00 49.47 C
ATOM 12 O2' A A 396 94.129 91.022 14.838 1.00 50.84 O
ATOM 13 C1' A A 396 94.569 92.694 16.498 1.00 47.43 C
ATOM 14 N9 A A 396 94.387 94.132 16.710 1.00 45.44 N
ATOM 15 C8 A A 396 95.347 95.078 16.979 1.00 44.67 C
ATOM 16 N7 A A 396 94.871 96.291 17.116 1.00 42.58 N
ATOM 17 C5 A A 396 93.507 96.136 16.926 1.00 44.17 C
ATOM 18 C6 A A 396 92.440 97.050 16.943 1.00 44.27 C
ATOM 19 N6 A A 396 92.588 98.359 17.159 1.00 41.53 N
ATOM 20 N1 A A 396 91.198 96.568 16.724 1.00 45.26 N
ATOM 21 C2 A A 396 91.048 95.256 16.501 1.00 44.63 C
ATOM 22 N3 A A 396 91.970 94.301 16.455 1.00 44.85 N
ATOM 23 C4 A A 396 93.194 94.812 16.677 1.00 44.65 C
ATOM 24 P U A 397 97.353 91.970 12.530 1.00 56.43 P
ATOM 25 OP1 U A 397 97.981 90.834 11.818 1.00 56.71 O
ATOM 26 OP2 U A 397 98.168 93.167 12.861 1.00 57.91 O
ATOM 27 O5' U A 397 96.098 92.457 11.684 1.00 55.78 O
TER
ATOM 1 O3' C B 400 91.995 88.902 14.879 1.00 54.03 O
ATOM 2 P G B 401 91.293 88.203 16.150 1.00 54.93 P
ATOM 3 OP1 G B 401 92.363 87.975 17.153 1.00 53.38 O
ATOM 4 OP2 G B 401 90.457 87.065 15.695 1.00 54.05 O
ATOM 5 O5' G B 401 90.300 89.325 16.696 1.00 52.43 O
ATOM 6 C5' G B 401 90.808 90.604 17.115 1.00 49.09 C
ATOM 7 C4' G B 401 89.678 91.574 17.343 1.00 46.16 C
ATOM 8 O4' G B 401 88.915 91.756 16.120 1.00 45.34 O
ATOM 9 C3' G B 401 88.619 91.149 18.335 1.00 45.16 C
ATOM 10 O3' G B 401 89.058 91.308 19.671 1.00 44.98 O
ATOM 11 C2' G B 401 87.478 92.084 17.972 1.00 44.61 C
ATOM 12 O2' G B 401 87.711 93.403 18.423 1.00 43.13 O
ATOM 13 C1' G B 401 87.568 92.066 16.446 1.00 44.14 C
ATOM 14 N9 G B 401 86.695 91.059 15.846 1.00 45.23 N
ATOM 15 C8 G B 401 87.065 89.868 15.266 1.00 44.80 C
ATOM 16 N7 G B 401 86.052 89.187 14.802 1.00 44.08 N
ATOM 17 C5 G B 401 84.944 89.970 15.098 1.00 44.40 C
ATOM 18 C6 G B 401 83.560 89.752 14.837 1.00 44.79 C
ATOM 19 O6 G B 401 83.019 88.792 14.273 1.00 44.93 O
ATOM 20 N1 G B 401 82.782 90.801 15.311 1.00 44.98 N
ATOM 21 C2 G B 401 83.267 91.916 15.949 1.00 45.19 C
ATOM 22 N2 G B 401 82.359 92.822 16.324 1.00 46.04 N
ATOM 23 N3 G B 401 84.548 92.130 16.200 1.00 43.84 N
ATOM 24 C4 G B 401 85.324 91.126 15.748 1.00 44.67 C
ATOM 25 P C B 402 88.505 90.315 20.808 1.00 44.01 P
ATOM 26 OP1 C B 402 89.461 90.379 21.939 1.00 40.47 O
ATOM 27 OP2 C B 402 88.191 89.005 20.188 1.00 44.25 O
ATOM 28 O5' C B 402 87.113 90.962 21.232 1.00 42.70 O
TER
Atoms:
OP1: (100.698,93.655,16.864)
OP2: (99.218,95.682,17.377)
C3': (96.265,92.228,14.915)
C1': (94.569,92.694,16.498)
C5': (98.074,92.080,16.713)
O4': (95.731,92.289,17.197)
C8: (95.347,95.078,16.979)
O2': (94.129,91.022,14.838)
C6: (92.440,97.050,16.943)
C5: (93.507,96.136,16.926)
C4: (93.194,94.812,16.677)
P: (99.450,94.220,17.436)
C4': (96.682,91.697,16.276)
C2': (94.745,92.278,15.033)
C2: (91.048,95.256,16.501)
N1: (91.198,96.568,16.724)
N3: (91.970,94.301,16.455)
N6: (92.588,98.359,17.159)
N7: (94.871,96.291,17.116)
N9: (94.387,94.132,16.710)
O5': (98.197,93.514,16.748)
O3': (96.715,91.359,13.879)
OP2: (99.218,95.682,17.377)
C3': (96.265,92.228,14.915)
C1': (94.569,92.694,16.498)
C5': (98.074,92.080,16.713)
O4': (95.731,92.289,17.197)
C8: (95.347,95.078,16.979)
O2': (94.129,91.022,14.838)
C6: (92.440,97.050,16.943)
C5: (93.507,96.136,16.926)
C4: (93.194,94.812,16.677)
P: (99.450,94.220,17.436)
C4': (96.682,91.697,16.276)
C2': (94.745,92.278,15.033)
C2: (91.048,95.256,16.501)
N1: (91.198,96.568,16.724)
N3: (91.970,94.301,16.455)
N6: (92.588,98.359,17.159)
N7: (94.871,96.291,17.116)
N9: (94.387,94.132,16.710)
O5': (98.197,93.514,16.748)
O3': (96.715,91.359,13.879)
OP1: (92.363,87.975,17.153)
OP2: (90.457,87.065,15.695)
C3': (88.619,91.149,18.335)
C1': (87.568,92.066,16.446)
C5': (90.808,90.604,17.115)
O6: (83.019,88.792,14.273)
O4': (88.915,91.756,16.120)
C8: (87.065,89.868,15.266)
C2: (83.267,91.916,15.949)
C6: (83.560,89.752,14.837)
C5: (84.944,89.970,15.098)
C4: (85.324,91.126,15.748)
P: (91.293,88.203,16.150)
C4': (89.678,91.574,17.343)
C2': (87.478,92.084,17.972)
O2': (87.711,93.403,18.423)
N1: (82.782,90.801,15.311)
N2: (82.359,92.822,16.324)
N3: (84.548,92.130,16.200)
N7: (86.052,89.187,14.802)
N9: (86.695,91.059,15.846)
O5': (90.300,89.325,16.696)
O3': (89.058,91.308,19.671)
OP2: (90.457,87.065,15.695)
C3': (88.619,91.149,18.335)
C1': (87.568,92.066,16.446)
C5': (90.808,90.604,17.115)
O6: (83.019,88.792,14.273)
O4': (88.915,91.756,16.120)
C8: (87.065,89.868,15.266)
C2: (83.267,91.916,15.949)
C6: (83.560,89.752,14.837)
C5: (84.944,89.970,15.098)
C4: (85.324,91.126,15.748)
P: (91.293,88.203,16.150)
C4': (89.678,91.574,17.343)
C2': (87.478,92.084,17.972)
O2': (87.711,93.403,18.423)
N1: (82.782,90.801,15.311)
N2: (82.359,92.822,16.324)
N3: (84.548,92.130,16.200)
N7: (86.052,89.187,14.802)
N9: (86.695,91.059,15.846)
O5': (90.300,89.325,16.696)
O3': (89.058,91.308,19.671)
Image (generated by PyMOL):