ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0396:0401

Extra

PDB:
ATOM 1 O3' A A 395 99.678 93.806 19.248 1.00 68.34 O
ATOM 2 P A A 396 99.759 94.433 17.764 1.00 67.89 P
ATOM 3 OP1 A A 396 101.052 93.989 17.180 1.00 68.19 O
ATOM 4 OP2 A A 396 99.445 95.883 17.816 1.00 67.63 O
ATOM 5 O5' A A 396 98.574 93.713 16.981 1.00 65.73 O
ATOM 6 C5' A A 396 98.500 92.281 16.913 1.00 65.29 C
ATOM 7 C4' A A 396 97.119 91.857 16.487 1.00 66.46 C
ATOM 8 O4' A A 396 96.154 92.418 17.412 1.00 64.91 O
ATOM 9 C3' A A 396 96.670 92.365 15.127 1.00 67.86 C
ATOM 10 O3' A A 396 97.156 91.511 14.093 1.00 71.03 O
ATOM 11 C2' A A 396 95.151 92.335 15.258 1.00 66.58 C
ATOM 12 O2' A A 396 94.620 91.032 15.099 1.00 65.87 O
ATOM 13 C1' A A 396 94.969 92.765 16.719 1.00 64.72 C
ATOM 14 N9 A A 396 94.727 94.195 16.927 1.00 62.19 N
ATOM 15 C8 A A 396 95.642 95.168 17.258 1.00 61.36 C
ATOM 16 N7 A A 396 95.118 96.361 17.399 1.00 59.65 N
ATOM 17 C5 A A 396 93.771 96.165 17.140 1.00 60.37 C
ATOM 18 C6 A A 396 92.680 97.042 17.128 1.00 61.05 C
ATOM 19 N6 A A 396 92.779 98.346 17.393 1.00 61.37 N
ATOM 20 N1 A A 396 91.465 96.528 16.830 1.00 60.25 N
ATOM 21 C2 A A 396 91.370 95.221 16.565 1.00 59.68 C
ATOM 22 N3 A A 396 92.322 94.296 16.544 1.00 59.54 N
ATOM 23 C4 A A 396 93.515 94.838 16.843 1.00 60.70 C
ATOM 24 P U A 397 97.747 92.142 12.734 1.00 74.14 P
ATOM 25 OP1 U A 397 98.418 91.029 12.017 1.00 74.57 O
ATOM 26 OP2 U A 397 98.507 93.378 13.040 1.00 75.43 O
ATOM 27 O5' U A 397 96.455 92.573 11.911 1.00 74.10 O
TER

ATOM 1 O3' C B 400 92.447 88.853 15.241 1.00 73.31 O
ATOM 2 P G B 401 91.686 88.222 16.507 1.00 73.07 P
ATOM 3 OP1 G B 401 92.706 88.020 17.575 1.00 72.84 O
ATOM 4 OP2 G B 401 90.864 87.072 16.041 1.00 71.90 O
ATOM 5 O5' G B 401 90.683 89.377 16.953 1.00 69.85 O
ATOM 6 C5' G B 401 91.181 90.677 17.310 1.00 65.70 C
ATOM 7 C4' G B 401 90.044 91.635 17.543 1.00 61.65 C
ATOM 8 O4' G B 401 89.252 91.780 16.334 1.00 61.50 O
ATOM 9 C3' G B 401 89.015 91.205 18.562 1.00 60.45 C
ATOM 10 O3' G B 401 89.497 91.407 19.878 1.00 60.80 O
ATOM 11 C2' G B 401 87.852 92.119 18.211 1.00 60.61 C
ATOM 12 O2' G B 401 88.063 93.444 18.645 1.00 61.21 O
ATOM 13 C1' G B 401 87.915 92.102 16.684 1.00 59.73 C
ATOM 14 N9 G B 401 87.020 91.104 16.104 1.00 59.22 N
ATOM 15 C8 G B 401 87.356 89.874 15.587 1.00 58.87 C
ATOM 16 N7 G B 401 86.323 89.201 15.152 1.00 58.17 N
ATOM 17 C5 G B 401 85.238 90.037 15.393 1.00 58.21 C
ATOM 18 C6 G B 401 83.844 89.851 15.135 1.00 56.50 C
ATOM 19 O6 G B 401 83.277 88.887 14.614 1.00 55.49 O
ATOM 20 N1 G B 401 83.097 90.944 15.552 1.00 55.75 N
ATOM 21 C2 G B 401 83.613 92.074 16.137 1.00 56.68 C
ATOM 22 N2 G B 401 82.727 93.012 16.485 1.00 56.37 N
ATOM 23 N3 G B 401 84.904 92.269 16.369 1.00 56.94 N
ATOM 24 C4 G B 401 85.652 91.217 15.979 1.00 58.60 C
ATOM 25 P C B 402 88.978 90.463 21.073 1.00 60.44 P
ATOM 26 OP1 C B 402 89.884 90.722 22.224 1.00 58.51 O
ATOM 27 OP2 C B 402 88.811 89.079 20.579 1.00 61.29 O
ATOM 28 O5' C B 402 87.533 91.043 21.407 1.00 58.40 O
TER

Atoms:
OP1: (101.052,93.989,17.180)
OP2: (99.445,95.883,17.816)
C3': (96.670,92.365,15.127)
C1': (94.969,92.765,16.719)
C5': (98.500,92.281,16.913)
O4': (96.154,92.418,17.412)
C8: (95.642,95.168,17.258)
O2': (94.620,91.032,15.099)
C6: (92.680,97.042,17.128)
C5: (93.771,96.165,17.140)
C4: (93.515,94.838,16.843)
P: (99.759,94.433,17.764)
C4': (97.119,91.857,16.487)
C2': (95.151,92.335,15.258)
C2: (91.370,95.221,16.565)
N1: (91.465,96.528,16.830)
N3: (92.322,94.296,16.544)
N6: (92.779,98.346,17.393)
N7: (95.118,96.361,17.399)
N9: (94.727,94.195,16.927)
O5': (98.574,93.713,16.981)
O3': (97.156,91.511,14.093)
OP1: (92.706,88.020,17.575)
OP2: (90.864,87.072,16.041)
C3': (89.015,91.205,18.562)
C1': (87.915,92.102,16.684)
C5': (91.181,90.677,17.310)
O6: (83.277,88.887,14.614)
O4': (89.252,91.780,16.334)
C8: (87.356,89.874,15.587)
C2: (83.613,92.074,16.137)
C6: (83.844,89.851,15.135)
C5: (85.238,90.037,15.393)
C4: (85.652,91.217,15.979)
P: (91.686,88.222,16.507)
C4': (90.044,91.635,17.543)
C2': (87.852,92.119,18.211)
O2': (88.063,93.444,18.645)
N1: (83.097,90.944,15.552)
N2: (82.727,93.012,16.485)
N3: (84.904,92.269,16.369)
N7: (86.323,89.201,15.152)
N9: (87.020,91.104,16.104)
O5': (90.683,89.377,16.953)
O3': (89.497,91.407,19.878)
Image (generated by PyMOL):
PyMOL image
show in jmol