Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0396:0401
Extra
PDB:
ATOM 1 O3' A A 395 99.485 93.595 18.895 1.00 57.16 O
ATOM 2 P A A 396 99.463 94.139 17.378 1.00 54.66 P
ATOM 3 OP1 A A 396 100.674 93.606 16.716 1.00 54.09 O
ATOM 4 OP2 A A 396 99.201 95.594 17.355 1.00 54.38 O
ATOM 5 O5' A A 396 98.195 93.421 16.746 1.00 53.70 O
ATOM 6 C5' A A 396 98.123 91.991 16.675 1.00 53.33 C
ATOM 7 C4' A A 396 96.753 91.578 16.221 1.00 53.89 C
ATOM 8 O4' A A 396 95.784 92.117 17.149 1.00 52.51 O
ATOM 9 C3' A A 396 96.341 92.152 14.879 1.00 55.51 C
ATOM 10 O3' A A 396 96.838 91.337 13.826 1.00 60.28 O
ATOM 11 C2' A A 396 94.823 92.162 14.977 1.00 53.54 C
ATOM 12 O2' A A 396 94.247 90.893 14.742 1.00 52.35 O
ATOM 13 C1' A A 396 94.632 92.537 16.449 1.00 52.13 C
ATOM 14 N9 A A 396 94.475 93.969 16.683 1.00 50.49 N
ATOM 15 C8 A A 396 95.449 94.886 16.980 1.00 49.51 C
ATOM 16 N7 A A 396 94.994 96.103 17.144 1.00 49.38 N
ATOM 17 C5 A A 396 93.630 95.978 16.936 1.00 49.27 C
ATOM 18 C6 A A 396 92.589 96.906 16.959 1.00 49.59 C
ATOM 19 N6 A A 396 92.764 98.203 17.200 1.00 49.66 N
ATOM 20 N1 A A 396 91.340 96.454 16.716 1.00 50.48 N
ATOM 21 C2 A A 396 91.166 95.154 16.458 1.00 49.55 C
ATOM 22 N3 A A 396 92.067 94.185 16.401 1.00 49.62 N
ATOM 23 C4 A A 396 93.296 94.669 16.654 1.00 50.11 C
ATOM 24 P U A 397 97.456 92.018 12.511 1.00 63.24 P
ATOM 25 OP1 U A 397 98.171 90.939 11.787 1.00 64.41 O
ATOM 26 OP2 U A 397 98.182 93.257 12.888 1.00 63.66 O
ATOM 27 O5' U A 397 96.180 92.440 11.666 1.00 63.74 O
TER
ATOM 1 O3' C B 400 92.134 88.777 14.814 1.00 61.41 O
ATOM 2 P G B 401 91.393 88.116 16.077 1.00 61.32 P
ATOM 3 OP1 G B 401 92.423 87.915 17.123 1.00 60.89 O
ATOM 4 OP2 G B 401 90.586 86.964 15.615 1.00 61.16 O
ATOM 5 O5' G B 401 90.388 89.255 16.556 1.00 59.13 O
ATOM 6 C5' G B 401 90.891 90.543 16.959 1.00 56.44 C
ATOM 7 C4' G B 401 89.758 91.502 17.229 1.00 53.07 C
ATOM 8 O4' G B 401 88.964 91.692 16.029 1.00 52.98 O
ATOM 9 C3' G B 401 88.734 91.063 18.252 1.00 51.44 C
ATOM 10 O3' G B 401 89.210 91.265 19.570 1.00 50.86 O
ATOM 11 C2' G B 401 87.560 91.969 17.917 1.00 51.23 C
ATOM 12 O2' G B 401 87.758 93.285 18.385 1.00 49.12 O
ATOM 13 C1' G B 401 87.622 91.976 16.390 1.00 51.11 C
ATOM 14 N9 G B 401 86.755 90.969 15.787 1.00 51.22 N
ATOM 15 C8 G B 401 87.126 89.767 15.235 1.00 51.26 C
ATOM 16 N7 G B 401 86.116 89.084 14.768 1.00 51.14 N
ATOM 17 C5 G B 401 85.010 89.882 15.029 1.00 51.24 C
ATOM 18 C6 G B 401 83.625 89.668 14.756 1.00 50.87 C
ATOM 19 O6 G B 401 83.086 88.701 14.205 1.00 51.95 O
ATOM 20 N1 G B 401 82.846 90.729 15.202 1.00 49.35 N
ATOM 21 C2 G B 401 83.329 91.850 15.831 1.00 49.78 C
ATOM 22 N2 G B 401 82.420 92.757 16.196 1.00 48.74 N
ATOM 23 N3 G B 401 84.609 92.065 16.086 1.00 50.63 N
ATOM 24 C4 G B 401 85.388 91.047 15.661 1.00 51.34 C
ATOM 25 P C B 402 88.669 90.335 20.758 1.00 50.06 P
ATOM 26 OP1 C B 402 89.591 90.519 21.903 1.00 49.62 O
ATOM 27 OP2 C B 402 88.425 88.980 20.230 1.00 51.37 O
ATOM 28 O5' C B 402 87.248 90.955 21.118 1.00 49.93 O
TER
ATOM 2 P A A 396 99.463 94.139 17.378 1.00 54.66 P
ATOM 3 OP1 A A 396 100.674 93.606 16.716 1.00 54.09 O
ATOM 4 OP2 A A 396 99.201 95.594 17.355 1.00 54.38 O
ATOM 5 O5' A A 396 98.195 93.421 16.746 1.00 53.70 O
ATOM 6 C5' A A 396 98.123 91.991 16.675 1.00 53.33 C
ATOM 7 C4' A A 396 96.753 91.578 16.221 1.00 53.89 C
ATOM 8 O4' A A 396 95.784 92.117 17.149 1.00 52.51 O
ATOM 9 C3' A A 396 96.341 92.152 14.879 1.00 55.51 C
ATOM 10 O3' A A 396 96.838 91.337 13.826 1.00 60.28 O
ATOM 11 C2' A A 396 94.823 92.162 14.977 1.00 53.54 C
ATOM 12 O2' A A 396 94.247 90.893 14.742 1.00 52.35 O
ATOM 13 C1' A A 396 94.632 92.537 16.449 1.00 52.13 C
ATOM 14 N9 A A 396 94.475 93.969 16.683 1.00 50.49 N
ATOM 15 C8 A A 396 95.449 94.886 16.980 1.00 49.51 C
ATOM 16 N7 A A 396 94.994 96.103 17.144 1.00 49.38 N
ATOM 17 C5 A A 396 93.630 95.978 16.936 1.00 49.27 C
ATOM 18 C6 A A 396 92.589 96.906 16.959 1.00 49.59 C
ATOM 19 N6 A A 396 92.764 98.203 17.200 1.00 49.66 N
ATOM 20 N1 A A 396 91.340 96.454 16.716 1.00 50.48 N
ATOM 21 C2 A A 396 91.166 95.154 16.458 1.00 49.55 C
ATOM 22 N3 A A 396 92.067 94.185 16.401 1.00 49.62 N
ATOM 23 C4 A A 396 93.296 94.669 16.654 1.00 50.11 C
ATOM 24 P U A 397 97.456 92.018 12.511 1.00 63.24 P
ATOM 25 OP1 U A 397 98.171 90.939 11.787 1.00 64.41 O
ATOM 26 OP2 U A 397 98.182 93.257 12.888 1.00 63.66 O
ATOM 27 O5' U A 397 96.180 92.440 11.666 1.00 63.74 O
TER
ATOM 1 O3' C B 400 92.134 88.777 14.814 1.00 61.41 O
ATOM 2 P G B 401 91.393 88.116 16.077 1.00 61.32 P
ATOM 3 OP1 G B 401 92.423 87.915 17.123 1.00 60.89 O
ATOM 4 OP2 G B 401 90.586 86.964 15.615 1.00 61.16 O
ATOM 5 O5' G B 401 90.388 89.255 16.556 1.00 59.13 O
ATOM 6 C5' G B 401 90.891 90.543 16.959 1.00 56.44 C
ATOM 7 C4' G B 401 89.758 91.502 17.229 1.00 53.07 C
ATOM 8 O4' G B 401 88.964 91.692 16.029 1.00 52.98 O
ATOM 9 C3' G B 401 88.734 91.063 18.252 1.00 51.44 C
ATOM 10 O3' G B 401 89.210 91.265 19.570 1.00 50.86 O
ATOM 11 C2' G B 401 87.560 91.969 17.917 1.00 51.23 C
ATOM 12 O2' G B 401 87.758 93.285 18.385 1.00 49.12 O
ATOM 13 C1' G B 401 87.622 91.976 16.390 1.00 51.11 C
ATOM 14 N9 G B 401 86.755 90.969 15.787 1.00 51.22 N
ATOM 15 C8 G B 401 87.126 89.767 15.235 1.00 51.26 C
ATOM 16 N7 G B 401 86.116 89.084 14.768 1.00 51.14 N
ATOM 17 C5 G B 401 85.010 89.882 15.029 1.00 51.24 C
ATOM 18 C6 G B 401 83.625 89.668 14.756 1.00 50.87 C
ATOM 19 O6 G B 401 83.086 88.701 14.205 1.00 51.95 O
ATOM 20 N1 G B 401 82.846 90.729 15.202 1.00 49.35 N
ATOM 21 C2 G B 401 83.329 91.850 15.831 1.00 49.78 C
ATOM 22 N2 G B 401 82.420 92.757 16.196 1.00 48.74 N
ATOM 23 N3 G B 401 84.609 92.065 16.086 1.00 50.63 N
ATOM 24 C4 G B 401 85.388 91.047 15.661 1.00 51.34 C
ATOM 25 P C B 402 88.669 90.335 20.758 1.00 50.06 P
ATOM 26 OP1 C B 402 89.591 90.519 21.903 1.00 49.62 O
ATOM 27 OP2 C B 402 88.425 88.980 20.230 1.00 51.37 O
ATOM 28 O5' C B 402 87.248 90.955 21.118 1.00 49.93 O
TER
Atoms:
OP1: (100.674,93.606,16.716)
OP2: (99.201,95.594,17.355)
C3': (96.341,92.152,14.879)
C1': (94.632,92.537,16.449)
C5': (98.123,91.991,16.675)
O4': (95.784,92.117,17.149)
C8: (95.449,94.886,16.980)
O2': (94.247,90.893,14.742)
C6: (92.589,96.906,16.959)
C5: (93.630,95.978,16.936)
C4: (93.296,94.669,16.654)
P: (99.463,94.139,17.378)
C4': (96.753,91.578,16.221)
C2': (94.823,92.162,14.977)
C2: (91.166,95.154,16.458)
N1: (91.340,96.454,16.716)
N3: (92.067,94.185,16.401)
N6: (92.764,98.203,17.200)
N7: (94.994,96.103,17.144)
N9: (94.475,93.969,16.683)
O5': (98.195,93.421,16.746)
O3': (96.838,91.337,13.826)
OP2: (99.201,95.594,17.355)
C3': (96.341,92.152,14.879)
C1': (94.632,92.537,16.449)
C5': (98.123,91.991,16.675)
O4': (95.784,92.117,17.149)
C8: (95.449,94.886,16.980)
O2': (94.247,90.893,14.742)
C6: (92.589,96.906,16.959)
C5: (93.630,95.978,16.936)
C4: (93.296,94.669,16.654)
P: (99.463,94.139,17.378)
C4': (96.753,91.578,16.221)
C2': (94.823,92.162,14.977)
C2: (91.166,95.154,16.458)
N1: (91.340,96.454,16.716)
N3: (92.067,94.185,16.401)
N6: (92.764,98.203,17.200)
N7: (94.994,96.103,17.144)
N9: (94.475,93.969,16.683)
O5': (98.195,93.421,16.746)
O3': (96.838,91.337,13.826)
OP1: (92.423,87.915,17.123)
OP2: (90.586,86.964,15.615)
C3': (88.734,91.063,18.252)
C1': (87.622,91.976,16.390)
C5': (90.891,90.543,16.959)
O6: (83.086,88.701,14.205)
O4': (88.964,91.692,16.029)
C8: (87.126,89.767,15.235)
C2: (83.329,91.850,15.831)
C6: (83.625,89.668,14.756)
C5: (85.010,89.882,15.029)
C4: (85.388,91.047,15.661)
P: (91.393,88.116,16.077)
C4': (89.758,91.502,17.229)
C2': (87.560,91.969,17.917)
O2': (87.758,93.285,18.385)
N1: (82.846,90.729,15.202)
N2: (82.420,92.757,16.196)
N3: (84.609,92.065,16.086)
N7: (86.116,89.084,14.768)
N9: (86.755,90.969,15.787)
O5': (90.388,89.255,16.556)
O3': (89.210,91.265,19.570)
OP2: (90.586,86.964,15.615)
C3': (88.734,91.063,18.252)
C1': (87.622,91.976,16.390)
C5': (90.891,90.543,16.959)
O6: (83.086,88.701,14.205)
O4': (88.964,91.692,16.029)
C8: (87.126,89.767,15.235)
C2: (83.329,91.850,15.831)
C6: (83.625,89.668,14.756)
C5: (85.010,89.882,15.029)
C4: (85.388,91.047,15.661)
P: (91.393,88.116,16.077)
C4': (89.758,91.502,17.229)
C2': (87.560,91.969,17.917)
O2': (87.758,93.285,18.385)
N1: (82.846,90.729,15.202)
N2: (82.420,92.757,16.196)
N3: (84.609,92.065,16.086)
N7: (86.116,89.084,14.768)
N9: (86.755,90.969,15.787)
O5': (90.388,89.255,16.556)
O3': (89.210,91.265,19.570)
Image (generated by PyMOL):